RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 LMOD2Q6P5Q4 547 aa13.07□□□□□ -0.32
XRN1-207ENST00000468894 CDHR5Q9HBB8 845 aa13.06□□□□□ -0.32
XRN1-207ENST00000468894 C6orf132Q5T0Z8 1188 aa13.04□□□□□ -0.32
XRN1-207ENST00000468894 KCNK17Q96T54 332 aa13.03□□□□□ -0.32
XRN1-207ENST00000468894 AXIN2Q9Y2T1 843 aa13.02□□□□□ -0.33
XRN1-207ENST00000468894 PTPREP23469 700 aa13.01□□□□□ -0.33
XRN1-207ENST00000468894 PBX2P40425 430 aa13.01□□□□□ -0.33
XRN1-207ENST00000468894 PSEN2P49810 448 aa13□□□□□ -0.33
XRN1-207ENST00000468894 NUTM2FA1L443 756 aa12.99□□□□□ -0.33
XRN1-207ENST00000468894 ARHGAP33O14559 1287 aa12.99□□□□□ -0.33
XRN1-207ENST00000468894 GPR37O15354 613 aa12.99□□□□□ -0.33
XRN1-207ENST00000468894 COL9A1P20849 921 aa12.99□□□□□ -0.33
XRN1-207ENST00000468894 GPIHBP1Q8IV16 184 aa12.99□□□□□ -0.33
XRN1-207ENST00000468894 PPP1R3GB7ZBB8 358 aa12.98□□□□□ -0.33
XRN1-207ENST00000468894 NPDC1Q9NQX5 325 aaPredicted RBP12.97□□□□□ -0.33
XRN1-207ENST00000468894 DMRTA1Q5VZB9 504 aa12.96□□□□□ -0.33
XRN1-207ENST00000468894 KRTAP3-3Q9BYR6 98 aa12.96□□□□□ -0.33
XRN1-207ENST00000468894 KRTAP3-2Q9BYR7 98 aa12.96□□□□□ -0.33
XRN1-207ENST00000468894 PTGDRQ13258 359 aa12.95□□□□□ -0.34
XRN1-207ENST00000468894 CDAN1Q8IWY9 1227 aa12.94□□□□□ -0.34
XRN1-207ENST00000468894 KCNH8Q96L42 1107 aa12.94□□□□□ -0.34
XRN1-207ENST00000468894 FCHSD2O94868 740 aa12.92□□□□□ -0.34
XRN1-207ENST00000468894 ZBED2Q9BTP6 218 aa12.92□□□□□ -0.34
XRN1-207ENST00000468894 LSM11P83369 360 aaKnown RBP eCLIP12.91□□□□□ -0.34
XRN1-207ENST00000468894 CERKQ8TCT0 537 aa12.91□□□□□ -0.34
XRN1-207ENST00000468894 PROX2Q3B8N5 592 aa12.89□□□□□ -0.35
XRN1-207ENST00000468894 ZC3H15Q8WU90 426 aaKnown RBP12.89□□□□□ -0.35
XRN1-207ENST00000468894 HIC1Q14526 733 aa12.88□□□□□ -0.35
XRN1-207ENST00000468894 PRSS12P56730 875 aa12.87□□□□□ -0.35
XRN1-207ENST00000468894 GNPATO15228 680 aa12.86□□□□□ -0.35
XRN1-207ENST00000468894 PADI6Q6TGC4 694 aa12.86□□□□□ -0.35
XRN1-207ENST00000468894 CDCA7LQ96GN5 454 aa12.86□□□□□ -0.35
XRN1-207ENST00000468894 SLC4A5Q9BY07 1137 aa12.86□□□□□ -0.35
XRN1-207ENST00000468894 RBM27Q9P2N5 1060 aaKnown RBP12.86□□□□□ -0.35
XRN1-207ENST00000468894 FAM198AQ9UFP1 575 aa12.85□□□□□ -0.35
XRN1-207ENST00000468894 TRIM6-TRIM34B2RNG4 842 aa12.84□□□□□ -0.35
XRN1-207ENST00000468894 FECHP22830 423 aa12.84□□□□□ -0.35
XRN1-207ENST00000468894 TTC13Q8NBP0 860 aa12.84□□□□□ -0.35
XRN1-207ENST00000468894 TSKSQ9UJT2 592 aa12.84□□□□□ -0.35
XRN1-207ENST00000468894 VPS9D1Q9Y2B5 631 aa12.84□□□□□ -0.35
XRN1-207ENST00000468894 TK2O00142 265 aa12.83□□□□□ -0.36
XRN1-207ENST00000468894 ADGRD1Q6QNK2 874 aa12.83□□□□□ -0.36
XRN1-207ENST00000468894 ZMYND10O75800 440 aa12.82□□□□□ -0.36
XRN1-207ENST00000468894 ANKRD13DQ6ZTN6 518 aa12.82□□□□□ -0.36
XRN1-207ENST00000468894 ONECUT3O60422 494 aaPredicted RBP12.79□□□□□ -0.36
XRN1-207ENST00000468894 PCDH10Q9P2E7 1040 aa12.79□□□□□ -0.36
XRN1-207ENST00000468894 C3orf80F5H4A9 247 aa12.78□□□□□ -0.36
XRN1-207ENST00000468894 BARGINQ6ZT62 677 aa12.78□□□□□ -0.36
XRN1-207ENST00000468894 HRO43593 1189 aa12.77□□□□□ -0.37
XRN1-207ENST00000468894 TPRNQ4KMQ1 711 aa12.77□□□□□ -0.37
XRN1-207ENST00000468894 KIAA1468Q9P260 1216 aa12.77□□□□□ -0.37
XRN1-207ENST00000468894 RABGEF1Q9UJ41 708 aa12.77□□□□□ -0.37
XRN1-207ENST00000468894 MAP2K5Q13163 448 aa12.76□□□□□ -0.37
XRN1-207ENST00000468894 BHMG1C9JSJ3 638 aaPredicted RBP12.74□□□□□ -0.37
XRN1-207ENST00000468894 FAM161AQ3B820 660 aa12.74□□□□□ -0.37
XRN1-207ENST00000468894 PACS2Q86VP3 889 aa12.74□□□□□ -0.37
XRN1-207ENST00000468894 ADGRG1Q9Y653 693 aa12.74□□□□□ -0.37
XRN1-207ENST00000468894 NBPF26B4DH59 902 aa12.73□□□□□ -0.37
XRN1-207ENST00000468894 SEPT9Q9UHD8 586 aaPredicted RBP12.72□□□□□ -0.37
XRN1-207ENST00000468894 SMAPO00193 183 aa12.71□□□□□ -0.37
XRN1-207ENST00000468894 NUDT18Q6ZVK8 323 aa12.71□□□□□ -0.37
XRN1-207ENST00000468894 TATDN2Q93075 761 aa12.71□□□□□ -0.37
XRN1-207ENST00000468894 PNMA3Q9UL41 463 aa12.71□□□□□ -0.37
XRN1-207ENST00000468894 MINK1Q8N4C8 1332 aaPredicted RBP12.7□□□□□ -0.38
XRN1-207ENST00000468894 CCDC102AQ96A19 550 aa12.7□□□□□ -0.38
XRN1-207ENST00000468894 NBPF3Q9H094 633 aa12.7□□□□□ -0.38
XRN1-207ENST00000468894 IRF6O14896 467 aa12.69□□□□□ -0.38
XRN1-207ENST00000468894 PRKCSHP14314 528 aaPredicted RBP12.69□□□□□ -0.38
XRN1-207ENST00000468894 EYA1Q99502 592 aa12.68□□□□□ -0.38
XRN1-207ENST00000468894 METTL3Q86U44 580 aaKnown RBP12.67□□□□□ -0.38
XRN1-207ENST00000468894 KRI1Q8N9T8 703 aaKnown RBP12.67□□□□□ -0.38
XRN1-207ENST00000468894 MRPL50Q8N5N7 158 aaKnown RBP12.66□□□□□ -0.38
XRN1-207ENST00000468894 PXYLP1Q8TE99 480 aa12.66□□□□□ -0.38
XRN1-207ENST00000468894 SLC24A3Q9HC58 644 aa12.66□□□□□ -0.38
XRN1-207ENST00000468894 RBM46Q8TBY0 533 aaKnown RBP12.65□□□□□ -0.38
XRN1-207ENST00000468894 OATP04181 439 aa12.64□□□□□ -0.39
XRN1-207ENST00000468894 FAM98CQ17RN3 349 aaKnown RBP12.64□□□□□ -0.39
XRN1-207ENST00000468894 LAPTM4BQ86VI4 370 aa12.64□□□□□ -0.39
XRN1-207ENST00000468894 PHOX2BQ99453 314 aa12.64□□□□□ -0.39
XRN1-207ENST00000468894 SPNS2Q8IVW8 549 aa12.63□□□□□ -0.39
XRN1-207ENST00000468894 RCCD1A6NED2 376 aa12.6□□□□□ -0.39
XRN1-207ENST00000468894 NLRP7Q8WX94 980 aa12.6□□□□□ -0.39
XRN1-207ENST00000468894 AK7Q96M32 723 aa12.6□□□□□ -0.39
XRN1-207ENST00000468894 ZFRQ96KR1 1074 aaKnown RBP12.59□□□□□ -0.39
XRN1-207ENST00000468894 STAC3Q96MF2 364 aa12.59□□□□□ -0.39
XRN1-207ENST00000468894 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.58□□□□□ -0.4
XRN1-207ENST00000468894 DNAJB2P25686 324 aa12.58□□□□□ -0.4
XRN1-207ENST00000468894 TRIM66O15016 1216 aa12.57□□□□□ -0.4
XRN1-207ENST00000468894 TMEM134Q9H6X4 195 aa12.56□□□□□ -0.4
XRN1-207ENST00000468894 MYT1LQ9UL68 1186 aa12.56□□□□□ -0.4
XRN1-207ENST00000468894 GOLGA8CPA6NN73 597 aa12.54□□□□□ -0.4
XRN1-207ENST00000468894 AMHR2Q16671 573 aa12.54□□□□□ -0.4
XRN1-207ENST00000468894 SAMD7Q7Z3H4 446 aa12.54□□□□□ -0.4
XRN1-207ENST00000468894 SWT1Q5T5J6 900 aaKnown RBP12.53□□□□□ -0.4
XRN1-207ENST00000468894 ANKK1Q8NFD2 765 aa12.53□□□□□ -0.4
XRN1-207ENST00000468894 WNT2BQ93097 391 aa12.53□□□□□ -0.4
XRN1-207ENST00000468894 MDM2Q00987 491 aaPredicted RBP12.51□□□□□ -0.41
XRN1-207ENST00000468894 KCTD12Q96CX2 325 aaKnown RBP12.51□□□□□ -0.41
XRN1-207ENST00000468894 BCAMP50895 628 aa12.5□□□□□ -0.41
XRN1-207ENST00000468894 SOWAHBA6NEL2 793 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms