RNA–Protein interactions for RNA: ENST00000468864.1

TRAPPC10-207, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 3,909 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-207ENST00000468864 HNRNPMP52272 730 aaKnown RBP eCLIP13.34□□□□□ -0.27
TRAPPC10-207ENST00000468864 ZNF644Q9H582 1327 aaPredicted RBP13.33□□□□□ -0.27
TRAPPC10-207ENST00000468864 CALD1Q05682 793 aaKnown RBP13.33□□□□□ -0.27
TRAPPC10-207ENST00000468864 NOL8Q76FK4 1167 aaKnown RBP13.33□□□□□ -0.27
TRAPPC10-207ENST00000468864 SOX12O15370 315 aa13.33□□□□□ -0.28
TRAPPC10-207ENST00000468864 ESF1Q9H501 851 aaKnown RBP13.33□□□□□ -0.28
TRAPPC10-207ENST00000468864 CUX1P39880 1505 aa13.32□□□□□ -0.28
TRAPPC10-207ENST00000468864 C11orf95C9JLR9 678 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC10-207ENST00000468864 FOXD4L6Q3SYB3 417 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC10-207ENST00000468864 FOXD4L3Q6VB84 417 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC10-207ENST00000468864 POGKQ9P215 609 aa13.32□□□□□ -0.28
TRAPPC10-207ENST00000468864 DDX49Q9Y6V7 483 aaKnown RBP13.32□□□□□ -0.28
TRAPPC10-207ENST00000468864 SRPK2P78362 688 aaKnown RBP13.31□□□□□ -0.28
TRAPPC10-207ENST00000468864 PANK1Q8TE04 598 aa13.31□□□□□ -0.28
TRAPPC10-207ENST00000468864 STK26Q9P289 416 aa13.31□□□□□ -0.28
TRAPPC10-207ENST00000468864 RRBP1Q9P2E9 1410 aaKnown RBP13.3□□□□□ -0.28
TRAPPC10-207ENST00000468864 ELL2O00472 640 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC10-207ENST00000468864 PNISRQ8TF01 805 aaKnown RBP13.3□□□□□ -0.28
TRAPPC10-207ENST00000468864 NPM1P06748 294 aaKnown RBP eCLIP13.3□□□□□ -0.28
TRAPPC10-207ENST00000468864 FAM13BQ9NYF5 915 aa13.3□□□□□ -0.28
TRAPPC10-207ENST00000468864 ADAMTS8Q9UP79 889 aa13.3□□□□□ -0.28
TRAPPC10-207ENST00000468864 UACAQ9BZF9 1416 aa13.29□□□□□ -0.28
TRAPPC10-207ENST00000468864 IPO8O15397 1037 aaKnown RBP13.29□□□□□ -0.28
TRAPPC10-207ENST00000468864 C14orf37Q86TY3 774 aa13.29□□□□□ -0.28
TRAPPC10-207ENST00000468864 CDK11BP21127 795 aaKnown RBP13.29□□□□□ -0.28
TRAPPC10-207ENST00000468864 ANKRD30AQ9BXX3 1397 aa13.28□□□□□ -0.28
TRAPPC10-207ENST00000468864 LAMC3Q9Y6N6 1575 aa13.28□□□□□ -0.28
TRAPPC10-207ENST00000468864 PRXQ9BXM0 1461 aa13.28□□□□□ -0.28
TRAPPC10-207ENST00000468864 CHAF1AQ13111 956 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC10-207ENST00000468864 IGF1RP08069 1367 aa13.28□□□□□ -0.28
TRAPPC10-207ENST00000468864 KCNJ4P48050 445 aa13.27□□□□□ -0.28
TRAPPC10-207ENST00000468864 KIAA2012Q0VF49 1180 aa13.27□□□□□ -0.28
TRAPPC10-207ENST00000468864 ZRSR1Q15695 479 aaKnown RBP13.27□□□□□ -0.29
TRAPPC10-207ENST00000468864 FGD6Q6ZV73 1430 aa13.27□□□□□ -0.29
TRAPPC10-207ENST00000468864 DRC7Q8IY82 874 aa13.27□□□□□ -0.29
TRAPPC10-207ENST00000468864 CGNL1Q0VF96 1302 aa13.27□□□□□ -0.29
TRAPPC10-207ENST00000468864 GOLGA6L4A6NEF3 574 aa13.26□□□□□ -0.29
TRAPPC10-207ENST00000468864 CHMP4BQ9H444 224 aaKnown RBP13.26□□□□□ -0.29
TRAPPC10-207ENST00000468864 DDX11L8A8MPP1 907 aa13.26□□□□□ -0.29
TRAPPC10-207ENST00000468864 LRRC9Q6ZRR7 1453 aa13.25□□□□□ -0.29
TRAPPC10-207ENST00000468864 CHMP5Q9NZZ3 219 aa13.25□□□□□ -0.29
TRAPPC10-207ENST00000468864 E9PSI1 815 aa13.25□□□□□ -0.29
TRAPPC10-207ENST00000468864 ANKRD45Q5TZF3 282 aa13.25□□□□□ -0.29
TRAPPC10-207ENST00000468864 NUTM2DQ5VT03 806 aaPredicted RBP13.24□□□□□ -0.29
TRAPPC10-207ENST00000468864 OS9Q13438 667 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC10-207ENST00000468864 FAM43AQ8N2R8 423 aa13.23□□□□□ -0.29
TRAPPC10-207ENST00000468864 NAP1L2Q9ULW6 460 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC10-207ENST00000468864 FGD1P98174 961 aa13.22□□□□□ -0.29
TRAPPC10-207ENST00000468864 BCAR3O75815 825 aa13.22□□□□□ -0.29
TRAPPC10-207ENST00000468864 TRAK1Q9UPV9 953 aa13.22□□□□□ -0.29
TRAPPC10-207ENST00000468864 TRAK2O60296 914 aa13.21□□□□□ -0.29
TRAPPC10-207ENST00000468864 GGT6Q6P531 493 aa13.21□□□□□ -0.29
TRAPPC10-207ENST00000468864 LNPKQ9C0E8 428 aa13.21□□□□□ -0.29
TRAPPC10-207ENST00000468864 C22orf23Q9BZE7 217 aa13.21□□□□□ -0.3
TRAPPC10-207ENST00000468864 C20orf194Q5TEA3 1177 aa13.2□□□□□ -0.3
TRAPPC10-207ENST00000468864 ZKSCAN2Q63HK3 967 aa13.2□□□□□ -0.3
TRAPPC10-207ENST00000468864 MCCP23508 829 aa13.2□□□□□ -0.3
TRAPPC10-207ENST00000468864 PTMSP20962 102 aa13.19□□□□□ -0.3
TRAPPC10-207ENST00000468864 NBPF1Q3BBV0 1214 aa13.19□□□□□ -0.3
TRAPPC10-207ENST00000468864 SMG6Q86US8 1419 aaKnown RBP13.18□□□□□ -0.3
TRAPPC10-207ENST00000468864 CFAP43Q8NDM7 1665 aa13.18□□□□□ -0.3
TRAPPC10-207ENST00000468864 SLC4A10Q6U841 1118 aa13.18□□□□□ -0.3
TRAPPC10-207ENST00000468864 TRIM6-TRIM34B2RNG4 842 aa13.18□□□□□ -0.3
TRAPPC10-207ENST00000468864 BRD4O60885 1362 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC10-207ENST00000468864 RBM10P98175 930 aaKnown RBP13.17□□□□□ -0.3
TRAPPC10-207ENST00000468864 R3HCC1Q9Y3T6 440 aaKnown RBP13.17□□□□□ -0.3
TRAPPC10-207ENST00000468864 MRE11P49959 708 aa13.16□□□□□ -0.3
TRAPPC10-207ENST00000468864 LRRIQ1Q96JM4 1722 aa13.16□□□□□ -0.3
TRAPPC10-207ENST00000468864 CCDC144AA2RUR9 1427 aa13.15□□□□□ -0.3
TRAPPC10-207ENST00000468864 DZIP1LQ8IYY4 767 aaKnown RBP13.15□□□□□ -0.3
TRAPPC10-207ENST00000468864 MYOM3Q5VTT5 1437 aa13.15□□□□□ -0.3
TRAPPC10-207ENST00000468864 RNF214Q8ND24 703 aa13.15□□□□□ -0.3
TRAPPC10-207ENST00000468864 ABCA5Q8WWZ7 1642 aa13.15□□□□□ -0.3
TRAPPC10-207ENST00000468864 KIF3BO15066 747 aa13.15□□□□□ -0.3
TRAPPC10-207ENST00000468864 PDZRN3Q9UPQ7 1066 aa13.15□□□□□ -0.3
TRAPPC10-207ENST00000468864 SKOR2Q2VWA4 1001 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC10-207ENST00000468864 SYAP1Q96A49 352 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC10-207ENST00000468864 KIF21AQ7Z4S6 1674 aa13.14□□□□□ -0.31
TRAPPC10-207ENST00000468864 ST18O60284 1047 aa13.14□□□□□ -0.31
TRAPPC10-207ENST00000468864 MAP3K1Q13233 1512 aa13.13□□□□□ -0.31
TRAPPC10-207ENST00000468864 MCTP1Q6DN14 999 aa13.13□□□□□ -0.31
TRAPPC10-207ENST00000468864 MPNDQ8N594 471 aa13.13□□□□□ -0.31
TRAPPC10-207ENST00000468864 CTTNBP2Q8WZ74 1663 aa13.13□□□□□ -0.31
TRAPPC10-207ENST00000468864 A0A0U1RQG5 324 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC10-207ENST00000468864 KIAA1211Q6ZU35 1233 aa13.13□□□□□ -0.31
TRAPPC10-207ENST00000468864 BCL11BQ9C0K0 894 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC10-207ENST00000468864 CADPSQ9ULU8 1353 aa13.12□□□□□ -0.31
TRAPPC10-207ENST00000468864 NASPP49321 788 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC10-207ENST00000468864 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.11□□□□□ -0.31
TRAPPC10-207ENST00000468864 PPP2R1AP30153 589 aa13.1□□□□□ -0.31
TRAPPC10-207ENST00000468864 CHMP3Q9Y3E7 222 aa13.1□□□□□ -0.31
TRAPPC10-207ENST00000468864 RILPL2Q969X0 211 aa13.09□□□□□ -0.31
TRAPPC10-207ENST00000468864 CFAP44Q96MT7 982 aa13.09□□□□□ -0.31
TRAPPC10-207ENST00000468864 DDX19BQ9UMR2 479 aa13.09□□□□□ -0.31
TRAPPC10-207ENST00000468864 MCM4P33991 863 aa13.09□□□□□ -0.31
TRAPPC10-207ENST00000468864 NCOA2Q15596 1464 aa13.09□□□□□ -0.31
TRAPPC10-207ENST00000468864 CAVIN1Q6NZI2 390 aaKnown RBP13.09□□□□□ -0.31
TRAPPC10-207ENST00000468864 HDGFL2Q7Z4V5 671 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC10-207ENST00000468864 NRDCO43847 1150 aa13.08□□□□□ -0.31
TRAPPC10-207ENST00000468864 TCP11L2Q8N4U5 519 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms