RNA–Protein interactions for RNA: ENST00000468570.1

SGIP1-208, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 324 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-208ENST00000468570 KIAA1468Q9P260 1216 aa7.75□□□□□ -1.17
SGIP1-208ENST00000468570 NKX1-1Q15270 411 aaPredicted RBP7.73□□□□□ -1.17
SGIP1-208ENST00000468570 HS6ST3Q8IZP7 471 aa7.73□□□□□ -1.17
SGIP1-208ENST00000468570 NRG2O14511 850 aaPredicted RBP7.71□□□□□ -1.18
SGIP1-208ENST00000468570 ONECUT3O60422 494 aaPredicted RBP7.71□□□□□ -1.18
SGIP1-208ENST00000468570 ZNF775Q96BV0 537 aaPredicted RBP7.71□□□□□ -1.18
SGIP1-208ENST00000468570 TJAP1Q5JTD0 557 aa7.69□□□□□ -1.18
SGIP1-208ENST00000468570 ZNF787Q6DD87 383 aa7.69□□□□□ -1.18
SGIP1-208ENST00000468570 PRKD2Q9BZL6 878 aa7.69□□□□□ -1.18
SGIP1-208ENST00000468570 EMILIN3Q9NT22 766 aa7.69□□□□□ -1.18
SGIP1-208ENST00000468570 SEPT9Q9UHD8 586 aaPredicted RBP7.69□□□□□ -1.18
SGIP1-208ENST00000468570 PDE4AP27815 886 aa7.68□□□□□ -1.18
SGIP1-208ENST00000468570 TSR3Q9UJK0 312 aaKnown RBP7.68□□□□□ -1.18
SGIP1-208ENST00000468570 MAP3K9P80192 1104 aa7.67□□□□□ -1.18
SGIP1-208ENST00000468570 DNAJC5Q9H3Z4 198 aa7.67□□□□□ -1.18
SGIP1-208ENST00000468570 CHGAP10645 457 aaKnown RBP7.66□□□□□ -1.18
SGIP1-208ENST00000468570 HPS5Q9UPZ3 1129 aa7.66□□□□□ -1.18
SGIP1-208ENST00000468570 PHF14O94880 888 aa7.65□□□□□ -1.18
SGIP1-208ENST00000468570 FAM98CQ17RN3 349 aaKnown RBP7.65□□□□□ -1.18
SGIP1-208ENST00000468570 C6orf132Q5T0Z8 1188 aa7.65□□□□□ -1.18
SGIP1-208ENST00000468570 TYW1BQ6NUM6 668 aa7.65□□□□□ -1.18
SGIP1-208ENST00000468570 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.65□□□□□ -1.18
SGIP1-208ENST00000468570 V9GY48 417 aaPredicted RBP7.65□□□□□ -1.18
SGIP1-208ENST00000468570 TRIM6-TRIM34B2RNG4 842 aa7.64□□□□□ -1.19
SGIP1-208ENST00000468570 PPP1R18Q6NYC8 613 aa7.64□□□□□ -1.19
SGIP1-208ENST00000468570 FBXW7Q969H0 707 aa7.64□□□□□ -1.19
SGIP1-208ENST00000468570 MFSD10Q14728 455 aa7.63□□□□□ -1.19
SGIP1-208ENST00000468570 LARP6Q9BRS8 491 aaKnown RBP7.63□□□□□ -1.19
SGIP1-208ENST00000468570 LRCH3Q96II8 777 aa7.61□□□□□ -1.19
SGIP1-208ENST00000468570 ZNF516Q92618 1163 aa7.59□□□□□ -1.19
SGIP1-208ENST00000468570 DDX27Q96GQ7 796 aaKnown RBP7.59□□□□□ -1.19
SGIP1-208ENST00000468570 PDZRN3Q9UPQ7 1066 aa7.59□□□□□ -1.19
SGIP1-208ENST00000468570 TSKSQ9UJT2 592 aa7.58□□□□□ -1.2
SGIP1-208ENST00000468570 POTECB2RU33 542 aa7.57□□□□□ -1.2
SGIP1-208ENST00000468570 PPP4CP60510 307 aa7.57□□□□□ -1.2
SGIP1-208ENST00000468570 MTRQ99707 1265 aa7.57□□□□□ -1.2
SGIP1-208ENST00000468570 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.57□□□□□ -1.2
SGIP1-208ENST00000468570 LCE2AQ5TA79 106 aaPredicted RBP7.56□□□□□ -1.2
SGIP1-208ENST00000468570 EPAS1Q99814 870 aa7.56□□□□□ -1.2
SGIP1-208ENST00000468570 TRIM67Q6ZTA4 783 aa7.55□□□□□ -1.2
SGIP1-208ENST00000468570 NKX2-3Q8TAU0 364 aa7.55□□□□□ -1.2
SGIP1-208ENST00000468570 IL21Q9HBE4 155 aa7.55□□□□□ -1.2
SGIP1-208ENST00000468570 C3orf80F5H4A9 247 aa7.54□□□□□ -1.2
SGIP1-208ENST00000468570 GTPBP6O43824 516 aaPredicted RBP7.54□□□□□ -1.2
SGIP1-208ENST00000468570 SAMD7Q7Z3H4 446 aa7.53□□□□□ -1.2
SGIP1-208ENST00000468570 FAM198AQ9UFP1 575 aa7.53□□□□□ -1.2
SGIP1-208ENST00000468570 RBM33Q96EV2 1170 aaKnown RBP7.52□□□□□ -1.21
SGIP1-208ENST00000468570 RYDENQ9NUL5 291 aaKnown RBP7.52□□□□□ -1.21
SGIP1-208ENST00000468570 EMID1Q96A84 441 aaPredicted RBP7.51□□□□□ -1.21
SGIP1-208ENST00000468570 SMAPO00193 183 aa7.5□□□□□ -1.21
SGIP1-208ENST00000468570 MYT1Q01538 1121 aa7.5□□□□□ -1.21
SGIP1-208ENST00000468570 PACS2Q86VP3 889 aa7.5□□□□□ -1.21
SGIP1-208ENST00000468570 CAMK2BQ13554 666 aa7.49□□□□□ -1.21
SGIP1-208ENST00000468570 CADPS2Q86UW7 1296 aa7.49□□□□□ -1.21
SGIP1-208ENST00000468570 APLP1P51693 650 aa7.48□□□□□ -1.21
SGIP1-208ENST00000468570 TSR1Q2NL82 804 aaKnown RBP7.48□□□□□ -1.21
SGIP1-208ENST00000468570 DDX12PQ92771 950 aa7.47□□□□□ -1.21
SGIP1-208ENST00000468570 TREML4Q6UXN2 200 aa7.46□□□□□ -1.22
SGIP1-208ENST00000468570 DPYSL4O14531 572 aa7.45□□□□□ -1.22
SGIP1-208ENST00000468570 EN1Q05925 392 aaPredicted RBP7.44□□□□□ -1.22
SGIP1-208ENST00000468570 CDCA7LQ96GN5 454 aa7.44□□□□□ -1.22
SGIP1-208ENST00000468570 TMUB1Q9BVT8 246 aa7.44□□□□□ -1.22
SGIP1-208ENST00000468570 PRSS12P56730 875 aa7.43□□□□□ -1.22
SGIP1-208ENST00000468570 TATDN2Q93075 761 aa7.43□□□□□ -1.22
SGIP1-208ENST00000468570 DGAT1O75907 488 aa7.42□□□□□ -1.22
SGIP1-208ENST00000468570 PRIM1P49642 420 aaKnown RBP7.42□□□□□ -1.22
SGIP1-208ENST00000468570 SLC19A1P41440 591 aa7.4□□□□□ -1.22
SGIP1-208ENST00000468570 RNF223E7ERA6 249 aa7.39□□□□□ -1.23
SGIP1-208ENST00000468570 MAP3K7O43318 606 aa7.39□□□□□ -1.23
SGIP1-208ENST00000468570 COPS2P61201 443 aa7.39□□□□□ -1.23
SGIP1-208ENST00000468570 PRR20EP86478 221 aa7.39□□□□□ -1.23
SGIP1-208ENST00000468570 PRR20CP86479 221 aa7.39□□□□□ -1.23
SGIP1-208ENST00000468570 PRR20DP86480 221 aa7.39□□□□□ -1.23
SGIP1-208ENST00000468570 PRR20BP86481 221 aa7.39□□□□□ -1.23
SGIP1-208ENST00000468570 PRR20AP86496 221 aa7.39□□□□□ -1.23
SGIP1-208ENST00000468570 PKDCCQ504Y2 493 aa7.39□□□□□ -1.23
SGIP1-208ENST00000468570 SPRYD7Q5W111 196 aa7.39□□□□□ -1.23
SGIP1-208ENST00000468570 ZPR1O75312 459 aa7.38□□□□□ -1.23
SGIP1-208ENST00000468570 NBR1Q14596 966 aa7.38□□□□□ -1.23
SGIP1-208ENST00000468570 PNMA3Q9UL41 463 aa7.38□□□□□ -1.23
SGIP1-208ENST00000468570 GGCXP38435 758 aa7.37□□□□□ -1.23
SGIP1-208ENST00000468570 ZNF598Q86UK7 904 aaKnown RBP7.37□□□□□ -1.23
SGIP1-208ENST00000468570 GDF9O60383 454 aa7.36□□□□□ -1.23
SGIP1-208ENST00000468570 DCAF8L2P0C7V8 631 aa7.36□□□□□ -1.23
SGIP1-208ENST00000468570 LIAT1Q6ZQX7 453 aa7.36□□□□□ -1.23
SGIP1-208ENST00000468570 RNF40O75150 1001 aa7.35□□□□□ -1.23
SGIP1-208ENST00000468570 NUDT18Q6ZVK8 323 aa7.35□□□□□ -1.23
SGIP1-208ENST00000468570 AAASQ9NRG9 546 aa7.35□□□□□ -1.23
SGIP1-208ENST00000468570 ST8SIA5O15466 376 aa7.34□□□□□ -1.23
SGIP1-208ENST00000468570 NBPF26B4DH59 902 aa7.33□□□□□ -1.24
SGIP1-208ENST00000468570 DACH1Q9UI36 760 aa7.33□□□□□ -1.24
SGIP1-208ENST00000468570 PPEF1O14829 653 aaPredicted RBP7.32□□□□□ -1.24
SGIP1-208ENST00000468570 PDIA6Q15084 440 aa7.32□□□□□ -1.24
SGIP1-208ENST00000468570 SWT1Q5T5J6 900 aaKnown RBP7.32□□□□□ -1.24
SGIP1-208ENST00000468570 TTC13Q8NBP0 860 aa7.32□□□□□ -1.24
SGIP1-208ENST00000468570 CERKQ8TCT0 537 aa7.32□□□□□ -1.24
SGIP1-208ENST00000468570 LOC100996750A0A140TA64 210 aa7.31□□□□□ -1.24
SGIP1-208ENST00000468570 KRTAP4-6Q9BYQ5 205 aa7.31□□□□□ -1.24
SGIP1-208ENST00000468570 FAM187AA6NFU0 413 aa7.3□□□□□ -1.24
SGIP1-208ENST00000468570 HDGFP51858 240 aaKnown RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms