RNA–Protein interactions for RNA: ENST00000468476.1

PABPC4-209, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 3,592 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-209ENST00000468476 CCDC184Q52MB2 194 aa12.09□□□□□ -0.47
PABPC4-209ENST00000468476 AEBP2Q6ZN18 517 aaPredicted RBP12.09□□□□□ -0.47
PABPC4-209ENST00000468476 LAS1LQ9Y4W2 734 aaKnown RBP12.09□□□□□ -0.47
PABPC4-209ENST00000468476 ROCK1Q13464 1354 aa12.09□□□□□ -0.47
PABPC4-209ENST00000468476 NUTM2DQ5VT03 806 aaPredicted RBP12.09□□□□□ -0.47
PABPC4-209ENST00000468476 RSPH6AQ9H0K4 717 aa12.07□□□□□ -0.48
PABPC4-209ENST00000468476 NBPF1Q3BBV0 1214 aa12.07□□□□□ -0.48
PABPC4-209ENST00000468476 KIF7Q2M1P5 1343 aa12.06□□□□□ -0.48
PABPC4-209ENST00000468476 RSPH4AQ5TD94 716 aa12.05□□□□□ -0.48
PABPC4-209ENST00000468476 KIAA1107Q9UPP5 1409 aa12.05□□□□□ -0.48
PABPC4-209ENST00000468476 ROCK2O75116 1388 aaKnown RBP12.05□□□□□ -0.48
PABPC4-209ENST00000468476 USP47Q96K76 1375 aa12.05□□□□□ -0.48
PABPC4-209ENST00000468476 NPM2Q86SE8 214 aaKnown RBP12.04□□□□□ -0.48
PABPC4-209ENST00000468476 RBM10P98175 930 aaKnown RBP12.04□□□□□ -0.48
PABPC4-209ENST00000468476 TMC1Q8TDI8 760 aa12.04□□□□□ -0.48
PABPC4-209ENST00000468476 MLECQ14165 292 aa12.04□□□□□ -0.48
PABPC4-209ENST00000468476 CC2D1BQ5T0F9 858 aaKnown RBP12.04□□□□□ -0.48
PABPC4-209ENST00000468476 CCDC144AA2RUR9 1427 aa12.03□□□□□ -0.48
PABPC4-209ENST00000468476 DNMT1P26358 1616 aaKnown RBP12.03□□□□□ -0.48
PABPC4-209ENST00000468476 SYCP2Q9BX26 1530 aa12.03□□□□□ -0.48
PABPC4-209ENST00000468476 DENND4BO75064 1496 aaPredicted RBP12.03□□□□□ -0.48
PABPC4-209ENST00000468476 ABCA8O94911 1581 aa12.02□□□□□ -0.48
PABPC4-209ENST00000468476 PLEKHH2Q8IVE3 1493 aa12.02□□□□□ -0.48
PABPC4-209ENST00000468476 RAPGEF3O95398 923 aa12.02□□□□□ -0.48
PABPC4-209ENST00000468476 SCAPERQ9BY12 1400 aa12.02□□□□□ -0.49
PABPC4-209ENST00000468476 CCDC7Q96M83 1385 aa12.01□□□□□ -0.49
PABPC4-209ENST00000468476 CCDC141Q6ZP82 1450 aa12.01□□□□□ -0.49
PABPC4-209ENST00000468476 PZPP20742 1482 aa12.01□□□□□ -0.49
PABPC4-209ENST00000468476 CCER2I3L3R5 266 aa12□□□□□ -0.49
PABPC4-209ENST00000468476 BCL11BQ9C0K0 894 aaPredicted RBP12□□□□□ -0.49
PABPC4-209ENST00000468476 RPRD2Q5VT52 1461 aaKnown RBP12□□□□□ -0.49
PABPC4-209ENST00000468476 B4GALNT3Q6L9W6 998 aa12□□□□□ -0.49
PABPC4-209ENST00000468476 PRKRIP1Q9H875 184 aaPredicted RBP12□□□□□ -0.49
PABPC4-209ENST00000468476 ABCC10Q5T3U5 1492 aa11.99□□□□□ -0.49
PABPC4-209ENST00000468476 TRAPPC8Q9Y2L5 1435 aa11.99□□□□□ -0.49
PABPC4-209ENST00000468476 ITSN2Q9NZM3 1697 aa11.99□□□□□ -0.49
PABPC4-209ENST00000468476 PDIA4P13667 645 aaKnown RBP11.99□□□□□ -0.49
PABPC4-209ENST00000468476 SAFB2Q14151 953 aaKnown RBP eCLIP11.99□□□□□ -0.49
PABPC4-209ENST00000468476 HSP90AA2PQ14568 343 aaPredicted RBP11.98□□□□□ -0.49
PABPC4-209ENST00000468476 FGD1P98174 961 aa11.97□□□□□ -0.49
PABPC4-209ENST00000468476 GCC2Q8IWJ2 1684 aa11.96□□□□□ -0.49
PABPC4-209ENST00000468476 IPO9Q96P70 1041 aaKnown RBP11.96□□□□□ -0.49
PABPC4-209ENST00000468476 STAG3Q9UJ98 1225 aa11.96□□□□□ -0.5
PABPC4-209ENST00000468476 NAP1L5Q96NT1 182 aaPredicted RBP11.95□□□□□ -0.5
PABPC4-209ENST00000468476 ABCC2Q92887 1545 aa11.95□□□□□ -0.5
PABPC4-209ENST00000468476 TTC37Q6PGP7 1564 aa11.95□□□□□ -0.5
PABPC4-209ENST00000468476 ARID4BQ4LE39 1312 aaPredicted RBP11.94□□□□□ -0.5
PABPC4-209ENST00000468476 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.94□□□□□ -0.5
PABPC4-209ENST00000468476 KANK1Q14678 1352 aa11.94□□□□□ -0.5
PABPC4-209ENST00000468476 CDC42BPAQ5VT25 1732 aa11.94□□□□□ -0.5
PABPC4-209ENST00000468476 WASHC2CQ9Y4E1 1318 aa11.94□□□□□ -0.5
PABPC4-209ENST00000468476 TNNT2P45379 298 aaPredicted RBP11.94□□□□□ -0.5
PABPC4-209ENST00000468476 MBD5Q9P267 1494 aa11.94□□□□□ -0.5
PABPC4-209ENST00000468476 AAMPQ13685 434 aa11.93□□□□□ -0.5
PABPC4-209ENST00000468476 FAM69CQ0P6D2 419 aa11.93□□□□□ -0.5
PABPC4-209ENST00000468476 PLCH2O75038 1416 aa11.92□□□□□ -0.5
PABPC4-209ENST00000468476 CNTLNQ9NXG0 1405 aa11.92□□□□□ -0.5
PABPC4-209ENST00000468476 SAMD9LQ8IVG5 1584 aa11.92□□□□□ -0.5
PABPC4-209ENST00000468476 STK26Q9P289 416 aa11.92□□□□□ -0.5
PABPC4-209ENST00000468476 ASXL2Q76L83 1435 aa11.91□□□□□ -0.5
PABPC4-209ENST00000468476 FANCAO15360 1455 aa11.91□□□□□ -0.5
PABPC4-209ENST00000468476 CFAP70Q5T0N1 1121 aa11.9□□□□□ -0.5
PABPC4-209ENST00000468476 PANK3Q9H999 370 aa11.9□□□□□ -0.5
PABPC4-209ENST00000468476 TRAK1Q9UPV9 953 aa11.9□□□□□ -0.5
PABPC4-209ENST00000468476 TMF1P82094 1093 aa11.9□□□□□ -0.5
PABPC4-209ENST00000468476 PPP4R2Q9NY27 417 aa11.9□□□□□ -0.5
PABPC4-209ENST00000468476 ARHGEF12Q9NZN5 1544 aa11.89□□□□□ -0.51
PABPC4-209ENST00000468476 TEX14Q8IWB6 1497 aa11.89□□□□□ -0.51
PABPC4-209ENST00000468476 TMEM132EQ6IEE7 984 aa11.89□□□□□ -0.51
PABPC4-209ENST00000468476 ADGRL1O94910 1474 aa11.89□□□□□ -0.51
PABPC4-209ENST00000468476 HSP90AA1P07900 732 aaKnown RBP11.88□□□□□ -0.51
PABPC4-209ENST00000468476 FAM135AQ9P2D6 1515 aa11.88□□□□□ -0.51
PABPC4-209ENST00000468476 ADGRL2O95490 1459 aa11.88□□□□□ -0.51
PABPC4-209ENST00000468476 GSE1Q14687 1217 aa11.87□□□□□ -0.51
PABPC4-209ENST00000468476 ESF1Q9H501 851 aaKnown RBP11.87□□□□□ -0.51
PABPC4-209ENST00000468476 KNSTRNQ9Y448 316 aa11.87□□□□□ -0.51
PABPC4-209ENST00000468476 CD109Q6YHK3 1445 aa11.86□□□□□ -0.51
PABPC4-209ENST00000468476 WDR7Q9Y4E6 1490 aa11.86□□□□□ -0.51
PABPC4-209ENST00000468476 KDM5BQ9UGL1 1544 aa11.86□□□□□ -0.51
PABPC4-209ENST00000468476 ZCCHC11Q5TAX3 1644 aaKnown RBP11.85□□□□□ -0.51
PABPC4-209ENST00000468476 CDC42BPBQ9Y5S2 1711 aa11.85□□□□□ -0.51
PABPC4-209ENST00000468476 CFAP65Q6ZU64 1925 aaKnown RBP11.85□□□□□ -0.51
PABPC4-209ENST00000468476 ADGBQ8N7X0 1667 aa11.84□□□□□ -0.51
PABPC4-209ENST00000468476 ARXQ96QS3 562 aa11.83□□□□□ -0.52
PABPC4-209ENST00000468476 SHANK2Q9UPX8 1470 aa11.83□□□□□ -0.52
PABPC4-209ENST00000468476 ADCY10Q96PN6 1610 aa11.83□□□□□ -0.52
PABPC4-209ENST00000468476 PREX2Q70Z35 1606 aa11.82□□□□□ -0.52
PABPC4-209ENST00000468476 FRAT1Q92837 279 aaPredicted RBP11.82□□□□□ -0.52
PABPC4-209ENST00000468476 USP35Q9P2H5 1018 aa11.82□□□□□ -0.52
PABPC4-209ENST00000468476 ADGRF5Q8IZF2 1346 aa11.81□□□□□ -0.52
PABPC4-209ENST00000468476 MYO5CQ9NQX4 1742 aa11.81□□□□□ -0.52
PABPC4-209ENST00000468476 PPM1GO15355 546 aaPredicted RBP11.81□□□□□ -0.52
PABPC4-209ENST00000468476 NEUROD2Q15784 382 aa11.81□□□□□ -0.52
PABPC4-209ENST00000468476 TRHP20396 242 aaPredicted RBP11.8□□□□□ -0.52
PABPC4-209ENST00000468476 FAM43AQ8N2R8 423 aa11.8□□□□□ -0.52
PABPC4-209ENST00000468476 WDR43Q15061 677 aaKnown RBP eCLIP11.8□□□□□ -0.52
PABPC4-209ENST00000468476 KTN1Q86UP2 1357 aaKnown RBP11.8□□□□□ -0.52
PABPC4-209ENST00000468476 DISP3Q9P2K9 1392 aa11.79□□□□□ -0.52
PABPC4-209ENST00000468476 CLASP1Q7Z460 1538 aa11.78□□□□□ -0.52
PABPC4-209ENST00000468476 FBXO31Q5XUX0 539 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms