RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 L3MBTL2Q969R5 705 aa14.46□□□□□ -0.09
MSH5-213ENST00000468136 MAP3K4Q9Y6R4 1608 aa14.44□□□□□ -0.1
MSH5-213ENST00000468136 FOXD1Q16676 465 aa14.44□□□□□ -0.1
MSH5-213ENST00000468136 STAC3Q96MF2 364 aa14.44□□□□□ -0.1
MSH5-213ENST00000468136 DEPDC5O75140 1603 aa14.44□□□□□ -0.1
MSH5-213ENST00000468136 CCDC144AA2RUR9 1427 aa14.42□□□□□ -0.1
MSH5-213ENST00000468136 UHRF1BP1Q6BDS2 1440 aa14.41□□□□□ -0.1
MSH5-213ENST00000468136 MYT1LQ9UL68 1186 aa14.41□□□□□ -0.1
MSH5-213ENST00000468136 HECW2Q9P2P5 1572 aa14.41□□□□□ -0.1
MSH5-213ENST00000468136 VWDEQ8N2E2 1590 aa14.4□□□□□ -0.1
MSH5-213ENST00000468136 A2MP01023 1474 aa14.4□□□□□ -0.1
MSH5-213ENST00000468136 EIF4G2P78344 907 aaKnown RBP eCLIP14.4□□□□□ -0.1
MSH5-213ENST00000468136 PRDM15P57071 1507 aaPredicted RBP14.39□□□□□ -0.11
MSH5-213ENST00000468136 KIDINS220Q9ULH0 1771 aa14.39□□□□□ -0.11
MSH5-213ENST00000468136 BCORL1Q5H9F3 1711 aa14.38□□□□□ -0.11
MSH5-213ENST00000468136 LMTK2Q8IWU2 1503 aa14.38□□□□□ -0.11
MSH5-213ENST00000468136 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.38□□□□□ -0.114e-7■□□□□ 10.9
MSH5-213ENST00000468136 DIP2BQ9P265 1576 aa14.38□□□□□ -0.11
MSH5-213ENST00000468136 TET3O43151 1660 aa14.37□□□□□ -0.11
MSH5-213ENST00000468136 NEURL4Q96JN8 1562 aa14.36□□□□□ -0.11
MSH5-213ENST00000468136 PTPRTO14522 1441 aa14.36□□□□□ -0.11
MSH5-213ENST00000468136 KIF3BO15066 747 aa14.36□□□□□ -0.11
MSH5-213ENST00000468136 FAM69CQ0P6D2 419 aa14.36□□□□□ -0.11
MSH5-213ENST00000468136 RNF17Q9BXT8 1623 aaKnown RBP14.36□□□□□ -0.11
MSH5-213ENST00000468136 ZMYM4Q5VZL5 1548 aa14.34□□□□□ -0.11
MSH5-213ENST00000468136 PLA2R1Q13018 1463 aa14.33□□□□□ -0.12
MSH5-213ENST00000468136 TRPM2O94759 1503 aa14.33□□□□□ -0.12
MSH5-213ENST00000468136 RALGAPBQ86X10 1494 aa14.32□□□□□ -0.12
MSH5-213ENST00000468136 ARID4BQ4LE39 1312 aaPredicted RBP14.32□□□□□ -0.12
MSH5-213ENST00000468136 PPP6R1Q9UPN7 881 aa14.31□□□□□ -0.12
MSH5-213ENST00000468136 RICTORQ6R327 1708 aa14.31□□□□□ -0.12
MSH5-213ENST00000468136 NBPF8Q3BBV2 869 aa14.3□□□□□ -0.12
MSH5-213ENST00000468136 MROH1Q8NDA8 1641 aa14.3□□□□□ -0.12
MSH5-213ENST00000468136 HSPA5P11021 654 aaKnown RBP14.29□□□□□ -0.12
MSH5-213ENST00000468136 EFCAB6Q5THR3 1501 aa14.29□□□□□ -0.12
MSH5-213ENST00000468136 E9PCH4 1651 aa14.28□□□□□ -0.12
MSH5-213ENST00000468136 SPATA31E1Q6ZUB1 1445 aa14.28□□□□□ -0.12
MSH5-213ENST00000468136 REREQ9P2R6 1566 aa14.28□□□□□ -0.12
MSH5-213ENST00000468136 FRMPD1Q5SYB0 1578 aa14.27□□□□□ -0.12
MSH5-213ENST00000468136 DIP2CQ9Y2E4 1556 aa14.27□□□□□ -0.12
MSH5-213ENST00000468136 MIER1Q8N108 512 aa14.27□□□□□ -0.13
MSH5-213ENST00000468136 SPHKAPQ2M3C7 1700 aa14.27□□□□□ -0.13
MSH5-213ENST00000468136 ABCA6Q8N139 1617 aa14.26□□□□□ -0.13
MSH5-213ENST00000468136 RAPGEF3O95398 923 aa14.26□□□□□ -0.13
MSH5-213ENST00000468136 DCAF11Q8TEB1 546 aa14.26□□□□□ -0.13
MSH5-213ENST00000468136 ARHGAP31Q2M1Z3 1444 aa14.25□□□□□ -0.13
MSH5-213ENST00000468136 PRAG1Q86YV5 1406 aa14.25□□□□□ -0.13
MSH5-213ENST00000468136 CENPBP07199 599 aaPredicted RBP14.25□□□□□ -0.13
MSH5-213ENST00000468136 CNTLNQ9NXG0 1405 aa14.24□□□□□ -0.13
MSH5-213ENST00000468136 GPRASP1Q5JY77 1395 aa14.24□□□□□ -0.13
MSH5-213ENST00000468136 ZC3H13Q5T200 1668 aaKnown RBP14.24□□□□□ -0.13
MSH5-213ENST00000468136 AGLP35573 1532 aa14.24□□□□□ -0.13
MSH5-213ENST00000468136 LAMC1P11047 1609 aa14.23□□□□□ -0.13
MSH5-213ENST00000468136 USP47Q96K76 1375 aa14.22□□□□□ -0.13
MSH5-213ENST00000468136 WASHC2CQ9Y4E1 1318 aa14.22□□□□□ -0.13
MSH5-213ENST00000468136 CEP152O94986 1710 aa14.22□□□□□ -0.13
MSH5-213ENST00000468136 SLC24A1O60721 1099 aa14.22□□□□□ -0.13
MSH5-213ENST00000468136 DDX10Q13206 875 aaKnown RBP14.22□□□□□ -0.13
MSH5-213ENST00000468136 CARD11Q9BXL7 1154 aa14.22□□□□□ -0.13
MSH5-213ENST00000468136 PPRC1Q5VV67 1664 aaKnown RBP14.22□□□□□ -0.13
MSH5-213ENST00000468136 ROCK2O75116 1388 aaKnown RBP14.22□□□□□ -0.13
MSH5-213ENST00000468136 ABCC3O15438 1527 aa14.21□□□□□ -0.13
MSH5-213ENST00000468136 ANP32CO43423 234 aa14.21□□□□□ -0.13
MSH5-213ENST00000468136 CCER2I3L3R5 266 aa14.2□□□□□ -0.14
MSH5-213ENST00000468136 CCDC7Q96M83 1385 aa14.2□□□□□ -0.14
MSH5-213ENST00000468136 RPGRIP1LQ68CZ1 1315 aa14.19□□□□□ -0.14
MSH5-213ENST00000468136 ZNF326Q5BKZ1 582 aaKnown RBP14.19□□□□□ -0.14
MSH5-213ENST00000468136 GGT6Q6P531 493 aa14.19□□□□□ -0.14
MSH5-213ENST00000468136 KDM2AQ9Y2K7 1162 aa14.19□□□□□ -0.14
MSH5-213ENST00000468136 CLTCL1P53675 1640 aa14.18□□□□□ -0.14
MSH5-213ENST00000468136 POLR1AO95602 1720 aaPredicted RBP14.18□□□□□ -0.14
MSH5-213ENST00000468136 MYOM2P54296 1465 aa14.18□□□□□ -0.14
MSH5-213ENST00000468136 WASHC2AQ641Q2 1341 aa14.17□□□□□ -0.14
MSH5-213ENST00000468136 NOS1P29475 1434 aa14.17□□□□□ -0.14
MSH5-213ENST00000468136 NPATQ14207 1427 aa14.17□□□□□ -0.14
MSH5-213ENST00000468136 YEATS2Q9ULM3 1422 aa14.17□□□□□ -0.14
MSH5-213ENST00000468136 TRPM1Q7Z4N2 1603 aa14.17□□□□□ -0.14
MSH5-213ENST00000468136 RGL3Q3MIN7 710 aa14.17□□□□□ -0.14
MSH5-213ENST00000468136 KIF13AQ9H1H9 1805 aa14.17□□□□□ -0.14
MSH5-213ENST00000468136 SLC52A1Q9NWF4 448 aa14.16□□□□□ -0.14
MSH5-213ENST00000468136 KIF1BO60333 1816 aa14.15□□□□□ -0.14
MSH5-213ENST00000468136 CAMSAP1Q5T5Y3 1602 aa14.15□□□□□ -0.14
MSH5-213ENST00000468136 HIRIP3Q9BW71 556 aaPredicted RBP14.14□□□□□ -0.15
MSH5-213ENST00000468136 KIAA1210Q9ULL0 1709 aa14.14□□□□□ -0.15
MSH5-213ENST00000468136 TSPOAP1O95153 1857 aa14.13□□□□□ -0.15
MSH5-213ENST00000468136 ARHGEF40Q8TER5 1519 aa14.13□□□□□ -0.15
MSH5-213ENST00000468136 ADGRB3O60242 1522 aa14.12□□□□□ -0.15
MSH5-213ENST00000468136 KIF7Q2M1P5 1343 aa14.12□□□□□ -0.15
MSH5-213ENST00000468136 EIF3AQ14152 1382 aaKnown RBP14.11□□□□□ -0.15
MSH5-213ENST00000468136 MADDQ8WXG6 1647 aa14.11□□□□□ -0.15
MSH5-213ENST00000468136 NRXN1Q9ULB1 1477 aa14.1□□□□□ -0.15
MSH5-213ENST00000468136 CDCA8Q53HL2 280 aa14.09□□□□□ -0.15
MSH5-213ENST00000468136 PIK3C2BO00750 1634 aa14.08□□□□□ -0.15
MSH5-213ENST00000468136 SCAF11Q99590 1463 aaKnown RBP14.08□□□□□ -0.16
MSH5-213ENST00000468136 ST20-MTHFSA0A0A6YYL1 179 aa14.08□□□□□ -0.16
MSH5-213ENST00000468136 ZFYVE9O95405 1425 aa14.07□□□□□ -0.16
MSH5-213ENST00000468136 KTN1Q86UP2 1357 aaKnown RBP14.07□□□□□ -0.16
MSH5-213ENST00000468136 VGFO15240 615 aaPredicted RBP14.06□□□□□ -0.16
MSH5-213ENST00000468136 TMF1P82094 1093 aa14.06□□□□□ -0.16
MSH5-213ENST00000468136 C11orf95C9JLR9 678 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms