RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 KDM4CQ9H3R0 1056 aa10.51□□□□□ -0.73
GAPVD1-211ENST00000467707 GPR153Q6NV75 609 aa10.5□□□□□ -0.73
GAPVD1-211ENST00000467707 ZDHHC16Q969W1 377 aa10.5□□□□□ -0.73
GAPVD1-211ENST00000467707 NPDC1Q9NQX5 325 aaPredicted RBP10.5□□□□□ -0.73
GAPVD1-211ENST00000467707 NUDT7P0C024 238 aa10.49□□□□□ -0.73
GAPVD1-211ENST00000467707 ARSIQ5FYB1 569 aa10.49□□□□□ -0.73
GAPVD1-211ENST00000467707 RBM33Q96EV2 1170 aaKnown RBP10.49□□□□□ -0.73
GAPVD1-211ENST00000467707 FECHP22830 423 aa10.48□□□□□ -0.73
GAPVD1-211ENST00000467707 ZNF454Q8N9F8 522 aa10.48□□□□□ -0.73
GAPVD1-211ENST00000467707 GPBP1L1Q9HC44 474 aaPredicted RBP10.48□□□□□ -0.73
GAPVD1-211ENST00000467707 CDHR5Q9HBB8 845 aa10.47□□□□□ -0.73
GAPVD1-211ENST00000467707 RBM27Q9P2N5 1060 aaKnown RBP10.47□□□□□ -0.73
GAPVD1-211ENST00000467707 TSR1Q2NL82 804 aaKnown RBP10.46□□□□□ -0.73
GAPVD1-211ENST00000467707 C6orf132Q5T0Z8 1188 aa10.46□□□□□ -0.73
GAPVD1-211ENST00000467707 DDRGK1Q96HY6 314 aa10.44□□□□□ -0.74
GAPVD1-211ENST00000467707 PPP4R3BQ5MIZ7 849 aa10.43□□□□□ -0.74
GAPVD1-211ENST00000467707 OATP04181 439 aa10.42□□□□□ -0.74
GAPVD1-211ENST00000467707 TTLL12Q14166 644 aaPredicted RBP10.42□□□□□ -0.74
GAPVD1-211ENST00000467707 PARP9Q8IXQ6 854 aa10.42□□□□□ -0.74
GAPVD1-211ENST00000467707 KHSRPQ92945 711 aaKnown RBP eCLIP10.41□□□□□ -0.74
GAPVD1-211ENST00000467707 HOXB1P14653 301 aaPredicted RBP10.4□□□□□ -0.74
GAPVD1-211ENST00000467707 CLCN1P35523 988 aa10.4□□□□□ -0.74
GAPVD1-211ENST00000467707 IL27Q8NEV9 243 aa10.4□□□□□ -0.74
GAPVD1-211ENST00000467707 ADAM33Q9BZ11 813 aa10.4□□□□□ -0.74
GAPVD1-211ENST00000467707 LHX6Q9UPM6 363 aa10.4□□□□□ -0.74
GAPVD1-211ENST00000467707 TTC13Q8NBP0 860 aa10.38□□□□□ -0.75
GAPVD1-211ENST00000467707 BCL2L12Q9HB09 334 aa10.38□□□□□ -0.75
GAPVD1-211ENST00000467707 PRSS12P56730 875 aa10.37□□□□□ -0.75
GAPVD1-211ENST00000467707 GPCPD1Q9NPB8 672 aa10.36□□□□□ -0.75
GAPVD1-211ENST00000467707 PTPREP23469 700 aa10.35□□□□□ -0.75
GAPVD1-211ENST00000467707 PADI6Q6TGC4 694 aa10.35□□□□□ -0.75
GAPVD1-211ENST00000467707 GIGYF2Q6Y7W6 1299 aaKnown RBP10.35□□□□□ -0.75
GAPVD1-211ENST00000467707 METTL3Q86U44 580 aaKnown RBP10.35□□□□□ -0.75
GAPVD1-211ENST00000467707 FAM117AQ9C073 453 aa10.35□□□□□ -0.75
GAPVD1-211ENST00000467707 ADGRG1Q9Y653 693 aa10.35□□□□□ -0.75
GAPVD1-211ENST00000467707 PPP1R3GB7ZBB8 358 aa10.34□□□□□ -0.75
GAPVD1-211ENST00000467707 CDCA7LQ96GN5 454 aa10.34□□□□□ -0.75
GAPVD1-211ENST00000467707 RBM46Q8TBY0 533 aaKnown RBP10.33□□□□□ -0.76
GAPVD1-211ENST00000467707 KCNH8Q96L42 1107 aa10.33□□□□□ -0.76
GAPVD1-211ENST00000467707 GOPCQ9HD26 462 aa10.33□□□□□ -0.76
GAPVD1-211ENST00000467707 PXYLP1Q8TE99 480 aa10.32□□□□□ -0.76
GAPVD1-211ENST00000467707 OTUD5Q96G74 571 aa10.32□□□□□ -0.76
GAPVD1-211ENST00000467707 TMUB1Q9BVT8 246 aa10.32□□□□□ -0.76
GAPVD1-211ENST00000467707 TIMELESSQ9UNS1 1208 aa10.31□□□□□ -0.76
GAPVD1-211ENST00000467707 PLEKHG3A1L390 1219 aa10.3□□□□□ -0.76
GAPVD1-211ENST00000467707 MDM2Q00987 491 aaPredicted RBP10.3□□□□□ -0.76
GAPVD1-211ENST00000467707 PHOX2BQ99453 314 aa10.29□□□□□ -0.76
GAPVD1-211ENST00000467707 ONECUT3O60422 494 aaPredicted RBP10.28□□□□□ -0.76
GAPVD1-211ENST00000467707 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.27□□□□□ -0.77
GAPVD1-211ENST00000467707 MS4A1P11836 297 aa10.27□□□□□ -0.77
GAPVD1-211ENST00000467707 COL9A1P20849 921 aa10.27□□□□□ -0.77
GAPVD1-211ENST00000467707 C14orf37Q86TY3 774 aa10.27□□□□□ -0.77
GAPVD1-211ENST00000467707 REPIN1Q9BWE0 567 aaKnown RBP10.27□□□□□ -0.77
GAPVD1-211ENST00000467707 NBPF26B4DH59 902 aa10.26□□□□□ -0.77
GAPVD1-211ENST00000467707 SSTR3P32745 418 aaPredicted RBP10.26□□□□□ -0.77
GAPVD1-211ENST00000467707 LHX8Q68G74 356 aa10.26□□□□□ -0.77
GAPVD1-211ENST00000467707 PACS2Q86VP3 889 aa10.26□□□□□ -0.77
GAPVD1-211ENST00000467707 FAM217BQ9NTX9 383 aaPredicted RBP10.26□□□□□ -0.77
GAPVD1-211ENST00000467707 FAM161AQ3B820 660 aa10.25□□□□□ -0.77
GAPVD1-211ENST00000467707 RSPH6AQ9H0K4 717 aa10.25□□□□□ -0.77
GAPVD1-211ENST00000467707 TRIM6-TRIM34B2RNG4 842 aa10.24□□□□□ -0.77
GAPVD1-211ENST00000467707 EYA1Q99502 592 aa10.23□□□□□ -0.77
GAPVD1-211ENST00000467707 DIXDC1Q155Q3 683 aa10.22□□□□□ -0.77
GAPVD1-211ENST00000467707 SH3D19Q5HYK7 790 aa10.22□□□□□ -0.77
GAPVD1-211ENST00000467707 KCNK17Q96T54 332 aa10.22□□□□□ -0.77
GAPVD1-211ENST00000467707 TSKSQ9UJT2 592 aa10.22□□□□□ -0.77
GAPVD1-211ENST00000467707 DNAJB2P25686 324 aa10.21□□□□□ -0.77
GAPVD1-211ENST00000467707 SULF1Q8IWU6 871 aa10.21□□□□□ -0.77
GAPVD1-211ENST00000467707 PCMTD1Q96MG8 357 aaPredicted RBP10.21□□□□□ -0.77
GAPVD1-211ENST00000467707 BEGAINQ9BUH8 593 aa10.21□□□□□ -0.77
GAPVD1-211ENST00000467707 RCCD1A6NED2 376 aa10.2□□□□□ -0.78
GAPVD1-211ENST00000467707 ERBB3P21860 1342 aa10.2□□□□□ -0.78
GAPVD1-211ENST00000467707 PBX2P40425 430 aa10.2□□□□□ -0.78
GAPVD1-211ENST00000467707 FAM198AQ9UFP1 575 aa10.2□□□□□ -0.78
GAPVD1-211ENST00000467707 ARHGAP33O14559 1287 aa10.19□□□□□ -0.78
GAPVD1-211ENST00000467707 NUDT18Q6ZVK8 323 aa10.19□□□□□ -0.78
GAPVD1-211ENST00000467707 TATDN2Q93075 761 aa10.19□□□□□ -0.78
GAPVD1-211ENST00000467707 SLC4A5Q9BY07 1137 aa10.19□□□□□ -0.78
GAPVD1-211ENST00000467707 PNMA3Q9UL41 463 aa10.18□□□□□ -0.78
GAPVD1-211ENST00000467707 SKIV2LQ15477 1246 aaKnown RBP10.17□□□□□ -0.78
GAPVD1-211ENST00000467707 ZBED2Q9BTP6 218 aa10.17□□□□□ -0.78
GAPVD1-211ENST00000467707 VARS2Q5ST30 1063 aaKnown RBP10.16□□□□□ -0.78
GAPVD1-211ENST00000467707 NLRP7Q8WX94 980 aa10.16□□□□□ -0.78
GAPVD1-211ENST00000467707 TMEM134Q9H6X4 195 aa10.16□□□□□ -0.78
GAPVD1-211ENST00000467707 EMP3P54852 163 aa10.15□□□□□ -0.78
GAPVD1-211ENST00000467707 ST18O60284 1047 aa10.14□□□□□ -0.79
GAPVD1-211ENST00000467707 PROX2Q3B8N5 592 aa10.14□□□□□ -0.79
GAPVD1-211ENST00000467707 RABGEF1Q9UJ41 708 aa10.14□□□□□ -0.79
GAPVD1-211ENST00000467707 FLIIQ13045 1269 aa10.13□□□□□ -0.79
GAPVD1-211ENST00000467707 RSPH4AQ5TD94 716 aa10.13□□□□□ -0.79
GAPVD1-211ENST00000467707 KIAA1468Q9P260 1216 aa10.13□□□□□ -0.79
GAPVD1-211ENST00000467707 CD46P15529 392 aa10.12□□□□□ -0.79
GAPVD1-211ENST00000467707 ZNF687Q8N1G0 1237 aa10.11□□□□□ -0.79
GAPVD1-211ENST00000467707 SLC4A3P48751 1232 aa10.1□□□□□ -0.79
GAPVD1-211ENST00000467707 PSEN2P49810 448 aa10.1□□□□□ -0.79
GAPVD1-211ENST00000467707 MYSM1Q5VVJ2 828 aa10.1□□□□□ -0.79
GAPVD1-211ENST00000467707 TBC1D2Q9BYX2 928 aa10.1□□□□□ -0.79
GAPVD1-211ENST00000467707 C3orf80F5H4A9 247 aa10.09□□□□□ -0.79
GAPVD1-211ENST00000467707 HDGFP51858 240 aaKnown RBP10.09□□□□□ -0.79
GAPVD1-211ENST00000467707 DDX11L8A8MPP1 907 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms