RNA–Protein interactions for RNA: ENST00000467387.1

SPTA1-204, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 5

Gene SPTA1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-204ENST00000467387 KDM5CP41229 1560 aa12.24□□□□□ -0.45
SPTA1-204ENST00000467387 RASEFQ8IZ41 740 aa12.24□□□□□ -0.45
SPTA1-204ENST00000467387 ARHGAP35Q9NRY4 1499 aa12.24□□□□□ -0.45
SPTA1-204ENST00000467387 DIP2CQ9Y2E4 1556 aa12.24□□□□□ -0.45
SPTA1-204ENST00000467387 DISP3Q9P2K9 1392 aa12.23□□□□□ -0.45
SPTA1-204ENST00000467387 AFAP1Q8N556 730 aa12.22□□□□□ -0.45
SPTA1-204ENST00000467387 ABCA6Q8N139 1617 aa12.22□□□□□ -0.45
SPTA1-204ENST00000467387 C19orf67A6NJJ6 358 aa12.2□□□□□ -0.46
SPTA1-204ENST00000467387 ABCC1P33527 1531 aa12.2□□□□□ -0.46
SPTA1-204ENST00000467387 PREX2Q70Z35 1606 aa12.19□□□□□ -0.46
SPTA1-204ENST00000467387 REREQ9P2R6 1566 aa12.19□□□□□ -0.46
SPTA1-204ENST00000467387 CCDC18Q5T9S5 1454 aa12.19□□□□□ -0.46
SPTA1-204ENST00000467387 MLH3Q9UHC1 1453 aa12.18□□□□□ -0.46
SPTA1-204ENST00000467387 C3P01024 1663 aa12.18□□□□□ -0.46
SPTA1-204ENST00000467387 ITSN2Q9NZM3 1697 aa12.18□□□□□ -0.46
SPTA1-204ENST00000467387 STRCQ7RTU9 1775 aa12.18□□□□□ -0.46
SPTA1-204ENST00000467387 SPATA31D1Q6ZQQ2 1576 aa12.18□□□□□ -0.46
SPTA1-204ENST00000467387 CD44P16070 742 aaKnown RBP12.17□□□□□ -0.46
SPTA1-204ENST00000467387 FAM212AQ96EL1 285 aa12.17□□□□□ -0.46
SPTA1-204ENST00000467387 CNTLNQ9NXG0 1405 aa12.16□□□□□ -0.46
SPTA1-204ENST00000467387 TRAPPC8Q9Y2L5 1435 aa12.16□□□□□ -0.46
SPTA1-204ENST00000467387 CDC42BPBQ9Y5S2 1711 aa12.16□□□□□ -0.46
SPTA1-204ENST00000467387 AGLP35573 1532 aa12.16□□□□□ -0.46
SPTA1-204ENST00000467387 LRRIQ1Q96JM4 1722 aa12.15□□□□□ -0.46
SPTA1-204ENST00000467387 PTPRTO14522 1441 aa12.15□□□□□ -0.46
SPTA1-204ENST00000467387 CASKIN1Q8WXD9 1431 aa12.14□□□□□ -0.47
SPTA1-204ENST00000467387 ZNF777Q9ULD5 760 aaPredicted RBP12.14□□□□□ -0.47
SPTA1-204ENST00000467387 HAX1O00165 279 aa12.13□□□□□ -0.47
SPTA1-204ENST00000467387 SETD1BQ9UPS6 1966 aaKnown RBP12.12□□□□□ -0.47
SPTA1-204ENST00000467387 NCOA1Q15788 1441 aa12.12□□□□□ -0.47
SPTA1-204ENST00000467387 SYCP2Q9BX26 1530 aa12.12□□□□□ -0.47
SPTA1-204ENST00000467387 GSE1Q14687 1217 aa12.12□□□□□ -0.47
SPTA1-204ENST00000467387 AMER1Q5JTC6 1135 aaPredicted RBP12.12□□□□□ -0.47
SPTA1-204ENST00000467387 TSPYL2Q9H2G4 693 aaPredicted RBP12.12□□□□□ -0.47
SPTA1-204ENST00000467387 KIDINS220Q9ULH0 1771 aa12.11□□□□□ -0.47
SPTA1-204ENST00000467387 FYCO1Q9BQS8 1478 aa12.11□□□□□ -0.47
SPTA1-204ENST00000467387 PAK3O75914 559 aaPredicted RBP12.11□□□□□ -0.47
SPTA1-204ENST00000467387 SPAG9O60271 1321 aaKnown RBP12.11□□□□□ -0.47
SPTA1-204ENST00000467387 SAMD9LQ8IVG5 1584 aa12.1□□□□□ -0.47
SPTA1-204ENST00000467387 DCAF8Q5TAQ9 597 aa12.1□□□□□ -0.47
SPTA1-204ENST00000467387 ILDR2Q71H61 639 aa12.1□□□□□ -0.47
SPTA1-204ENST00000467387 RTN4Q9NQC3 1192 aaKnown RBP12.1□□□□□ -0.47
SPTA1-204ENST00000467387 CDC42BPAQ5VT25 1732 aa12.1□□□□□ -0.47
SPTA1-204ENST00000467387 CAMSAP1Q5T5Y3 1602 aa12.1□□□□□ -0.47
SPTA1-204ENST00000467387 SOCS7O14512 581 aa12.09□□□□□ -0.47
SPTA1-204ENST00000467387 PKD2Q13563 968 aa12.09□□□□□ -0.47
SPTA1-204ENST00000467387 CIZ1Q9ULV3 898 aaPredicted RBP12.09□□□□□ -0.47
SPTA1-204ENST00000467387 CCDC61Q9Y6R9 512 aa12.09□□□□□ -0.47
SPTA1-204ENST00000467387 NPATQ14207 1427 aa12.09□□□□□ -0.47
SPTA1-204ENST00000467387 IQSEC2Q5JU85 1478 aa12.08□□□□□ -0.47
SPTA1-204ENST00000467387 ATP7AQ04656 1500 aa12.08□□□□□ -0.48
SPTA1-204ENST00000467387 MROH2AA6NES4 1674 aa12.08□□□□□ -0.48
SPTA1-204ENST00000467387 EVX2Q03828 476 aa12.08□□□□□ -0.48
SPTA1-204ENST00000467387 ZRANB1Q9UGI0 708 aa12.08□□□□□ -0.48
SPTA1-204ENST00000467387 SUPT6HQ7KZ85 1726 aaKnown RBP12.08□□□□□ -0.48
SPTA1-204ENST00000467387 LTBP4Q8N2S1 1624 aa12.08□□□□□ -0.48
SPTA1-204ENST00000467387 MYO3AQ8NEV4 1616 aa12.07□□□□□ -0.48
SPTA1-204ENST00000467387 PLEKHH2Q8IVE3 1493 aa12.06□□□□□ -0.48
SPTA1-204ENST00000467387 CLTCQ00610 1675 aaKnown RBP12.06□□□□□ -0.48
SPTA1-204ENST00000467387 CCNB3Q8WWL7 1395 aa12.05□□□□□ -0.48
SPTA1-204ENST00000467387 ZNF579Q8NAF0 562 aaKnown RBP12.05□□□□□ -0.48
SPTA1-204ENST00000467387 INO80Q9ULG1 1556 aaPredicted RBP12.05□□□□□ -0.48
SPTA1-204ENST00000467387 ZMYM3Q14202 1370 aa12.05□□□□□ -0.48
SPTA1-204ENST00000467387 A2MP01023 1474 aa12.04□□□□□ -0.48
SPTA1-204ENST00000467387 UBAP1LF5GYI3 381 aa12.04□□□□□ -0.48
SPTA1-204ENST00000467387 HNRNPMP52272 730 aaKnown RBP eCLIP12.04□□□□□ -0.48
SPTA1-204ENST00000467387 CFDP1Q9UEE9 299 aaPredicted RBP12.04□□□□□ -0.48
SPTA1-204ENST00000467387 GPATCH8Q9UKJ3 1502 aaKnown RBP12.04□□□□□ -0.48
SPTA1-204ENST00000467387 ZNF335Q9H4Z2 1342 aaPredicted RBP12.04□□□□□ -0.48
SPTA1-204ENST00000467387 NCKAP5LQ9HCH0 1330 aa12.04□□□□□ -0.48
SPTA1-204ENST00000467387 CEP170BQ9Y4F5 1589 aaPredicted RBP12.04□□□□□ -0.48
SPTA1-204ENST00000467387 ZNF142P52746 1687 aaPredicted RBP12.03□□□□□ -0.48
SPTA1-204ENST00000467387 GGT6Q6P531 493 aa12.03□□□□□ -0.48
SPTA1-204ENST00000467387 PLXNC1O60486 1568 aa12.03□□□□□ -0.48
SPTA1-204ENST00000467387 MTUS2Q5JR59 1369 aa12.03□□□□□ -0.48
SPTA1-204ENST00000467387 PLA2R1Q13018 1463 aa12.02□□□□□ -0.48
SPTA1-204ENST00000467387 KIAA1107Q9UPP5 1409 aa12.02□□□□□ -0.49
SPTA1-204ENST00000467387 PTPRKQ15262 1439 aa12□□□□□ -0.49
SPTA1-204ENST00000467387 ADGBQ8N7X0 1667 aa12□□□□□ -0.49
SPTA1-204ENST00000467387 CHRM1P11229 460 aaPredicted RBP11.99□□□□□ -0.49
SPTA1-204ENST00000467387 PHF12Q96QT6 1004 aa11.99□□□□□ -0.49
SPTA1-204ENST00000467387 TCOF1Q13428 1488 aaKnown RBP11.98□□□□□ -0.49
SPTA1-204ENST00000467387 PYGBP11216 843 aa11.98□□□□□ -0.49
SPTA1-204ENST00000467387 EHBP1L1Q8N3D4 1523 aa11.97□□□□□ -0.49
SPTA1-204ENST00000467387 ECM2O94769 699 aaPredicted RBP11.97□□□□□ -0.49
SPTA1-204ENST00000467387 A2ML1A8K2U0 1454 aa11.96□□□□□ -0.49
SPTA1-204ENST00000467387 KIF12Q96FN5 646 aa11.96□□□□□ -0.49
SPTA1-204ENST00000467387 TIAM1Q13009 1591 aa11.96□□□□□ -0.5
SPTA1-204ENST00000467387 TNRQ92752 1358 aa11.94□□□□□ -0.5
SPTA1-204ENST00000467387 PIP4K2BP78356 416 aa11.94□□□□□ -0.5
SPTA1-204ENST00000467387 ZNF644Q9H582 1327 aaPredicted RBP11.93□□□□□ -0.5
SPTA1-204ENST00000467387 KDM5DQ9BY66 1539 aa11.93□□□□□ -0.5
SPTA1-204ENST00000467387 POLR1AO95602 1720 aaPredicted RBP11.93□□□□□ -0.5
SPTA1-204ENST00000467387 DNMT1P26358 1616 aaKnown RBP11.93□□□□□ -0.5
SPTA1-204ENST00000467387 CPS1P31327 1500 aa11.92□□□□□ -0.5
SPTA1-204ENST00000467387 CCDC141Q6ZP82 1450 aa11.92□□□□□ -0.5
SPTA1-204ENST00000467387 PZPP20742 1482 aa11.91□□□□□ -0.5
SPTA1-204ENST00000467387 KIF3BO15066 747 aa11.91□□□□□ -0.5
SPTA1-204ENST00000467387 MAP3K13O43283 966 aa11.91□□□□□ -0.5
SPTA1-204ENST00000467387 CAMSAP2Q08AD1 1489 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms