RNA–Protein interactions for RNA: ENST00000467343.1

CRAT-209, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 5

Gene CRAT, Length 399 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-209ENST00000467343 DMRT2Q9Y5R5 561 aa19.05■□□□□ 0.64
CRAT-209ENST00000467343 DAPK1P53355 1430 aa19.05■□□□□ 0.64
CRAT-209ENST00000467343 KIF15Q9NS87 1388 aa19.04■□□□□ 0.64
CRAT-209ENST00000467343 DNMT1P26358 1616 aaKnown RBP19.03■□□□□ 0.64
CRAT-209ENST00000467343 MYO3AQ8NEV4 1616 aa19.03■□□□□ 0.64
CRAT-209ENST00000467343 ABCC5O15440 1437 aa19.03■□□□□ 0.64
CRAT-209ENST00000467343 PPARGC1BQ86YN6 1023 aaKnown RBP19.03■□□□□ 0.64
CRAT-209ENST00000467343 DUOX2Q9NRD8 1548 aa19.03■□□□□ 0.64
CRAT-209ENST00000467343 SHANK2Q9UPX8 1470 aa19.03■□□□□ 0.64
CRAT-209ENST00000467343 PTPRKQ15262 1439 aa19.02■□□□□ 0.64
CRAT-209ENST00000467343 EIF2AK4Q9P2K8 1649 aaKnown RBP19.02■□□□□ 0.64
CRAT-209ENST00000467343 TCOF1Q13428 1488 aaKnown RBP19.02■□□□□ 0.63
CRAT-209ENST00000467343 FAM135AQ9P2D6 1515 aa19■□□□□ 0.63
CRAT-209ENST00000467343 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19■□□□□ 0.63
CRAT-209ENST00000467343 CAMSAP1Q5T5Y3 1602 aa19■□□□□ 0.63
CRAT-209ENST00000467343 ANKRD30AQ9BXX3 1397 aa18.99■□□□□ 0.63
CRAT-209ENST00000467343 RNF17Q9BXT8 1623 aaKnown RBP18.99■□□□□ 0.63
CRAT-209ENST00000467343 STRCQ7RTU9 1775 aa18.98■□□□□ 0.63
CRAT-209ENST00000467343 CEP170BQ9Y4F5 1589 aaPredicted RBP18.98■□□□□ 0.63
CRAT-209ENST00000467343 TNRQ92752 1358 aa18.98■□□□□ 0.63
CRAT-209ENST00000467343 FBXO31Q5XUX0 539 aaPredicted RBP18.97■□□□□ 0.63
CRAT-209ENST00000467343 ZNF142P52746 1687 aaPredicted RBP18.97■□□□□ 0.63
CRAT-209ENST00000467343 ZC3H13Q5T200 1668 aaKnown RBP18.97■□□□□ 0.63
CRAT-209ENST00000467343 PZPP20742 1482 aa18.97■□□□□ 0.63
CRAT-209ENST00000467343 ERBINQ96RT1 1412 aa18.96■□□□□ 0.63
CRAT-209ENST00000467343 CEP152O94986 1710 aa18.96■□□□□ 0.63
CRAT-209ENST00000467343 KANK1Q14678 1352 aa18.94■□□□□ 0.62
CRAT-209ENST00000467343 NCOA1Q15788 1441 aa18.94■□□□□ 0.62
CRAT-209ENST00000467343 NCKAP5LQ9HCH0 1330 aa18.94■□□□□ 0.62
CRAT-209ENST00000467343 ABCC3O15438 1527 aa18.94■□□□□ 0.62
CRAT-209ENST00000467343 ITGAEP38570 1179 aa18.93■□□□□ 0.62
CRAT-209ENST00000467343 A2ML1A8K2U0 1454 aa18.92■□□□□ 0.62
CRAT-209ENST00000467343 CERKQ8TCT0 537 aa18.92■□□□□ 0.62
CRAT-209ENST00000467343 PTPRTO14522 1441 aa18.91■□□□□ 0.62
CRAT-209ENST00000467343 MROH1Q8NDA8 1641 aa18.89■□□□□ 0.62
CRAT-209ENST00000467343 CFAP65Q6ZU64 1925 aaKnown RBP18.89■□□□□ 0.61
CRAT-209ENST00000467343 PKD2Q13563 968 aa18.88■□□□□ 0.61
CRAT-209ENST00000467343 PRDM15P57071 1507 aaPredicted RBP18.87■□□□□ 0.61
CRAT-209ENST00000467343 PLA2R1Q13018 1463 aa18.87■□□□□ 0.61
CRAT-209ENST00000467343 NLRP1Q9C000 1473 aa18.86■□□□□ 0.61
CRAT-209ENST00000467343 UGGT1Q9NYU2 1555 aa18.85■□□□□ 0.61
CRAT-209ENST00000467343 ADGRL2O95490 1459 aa18.85■□□□□ 0.61
CRAT-209ENST00000467343 ERVK-7P63135 1459 aa18.85■□□□□ 0.61
CRAT-209ENST00000467343 THEMISQ8N1K5 641 aaPredicted RBP18.85■□□□□ 0.61
CRAT-209ENST00000467343 DEPDC5O75140 1603 aa18.83■□□□□ 0.61
CRAT-209ENST00000467343 STAG3Q9UJ98 1225 aa18.83■□□□□ 0.6
CRAT-209ENST00000467343 POLR1AO95602 1720 aaPredicted RBP18.83■□□□□ 0.6
CRAT-209ENST00000467343 ANKRD50Q9ULJ7 1429 aa18.83■□□□□ 0.6
CRAT-209ENST00000467343 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.82■□□□□ 0.6
CRAT-209ENST00000467343 SPATA31D1Q6ZQQ2 1576 aa18.82■□□□□ 0.6
CRAT-209ENST00000467343 ANKLE2Q86XL3 938 aa18.82■□□□□ 0.6
CRAT-209ENST00000467343 ILDR2Q71H61 639 aa18.81■□□□□ 0.6
CRAT-209ENST00000467343 DISP3Q9P2K9 1392 aa18.8■□□□□ 0.6
CRAT-209ENST00000467343 ZNF335Q9H4Z2 1342 aaPredicted RBP18.77■□□□□ 0.6
CRAT-209ENST00000467343 ARHGAP31Q2M1Z3 1444 aa18.76■□□□□ 0.59
CRAT-209ENST00000467343 ROCK1Q13464 1354 aa18.74■□□□□ 0.59
CRAT-209ENST00000467343 EFCAB6Q5THR3 1501 aa18.73■□□□□ 0.59
CRAT-209ENST00000467343 LMTK2Q8IWU2 1503 aa18.73■□□□□ 0.59
CRAT-209ENST00000467343 UBR1Q8IWV7 1749 aa18.72■□□□□ 0.59
CRAT-209ENST00000467343 NPHP4O75161 1426 aaPredicted RBP18.72■□□□□ 0.59
CRAT-209ENST00000467343 VWDEQ8N2E2 1590 aa18.72■□□□□ 0.59
CRAT-209ENST00000467343 LTBP4Q8N2S1 1624 aa18.71■□□□□ 0.59
CRAT-209ENST00000467343 EID1Q9Y6B2 187 aa18.71■□□□□ 0.59
CRAT-209ENST00000467343 NEURL4Q96JN8 1562 aa18.71■□□□□ 0.59
CRAT-209ENST00000467343 PIK3C2BO00750 1634 aa18.7■□□□□ 0.58
CRAT-209ENST00000467343 IQGAP1P46940 1657 aa18.69■□□□□ 0.58
CRAT-209ENST00000467343 UNC13BO14795 1591 aa18.68■□□□□ 0.58
CRAT-209ENST00000467343 TXNDC2Q86VQ3 553 aa18.68■□□□□ 0.58
CRAT-209ENST00000467343 TET3O43151 1660 aa18.68■□□□□ 0.58
CRAT-209ENST00000467343 CHGAP10645 457 aaKnown RBP18.67■□□□□ 0.58
CRAT-209ENST00000467343 GCC2Q8IWJ2 1684 aa18.66■□□□□ 0.58
CRAT-209ENST00000467343 SCAF11Q99590 1463 aaKnown RBP18.66■□□□□ 0.58
CRAT-209ENST00000467343 SOCS7O14512 581 aa18.66■□□□□ 0.58
CRAT-209ENST00000467343 BCANQ96GW7 911 aa18.66■□□□□ 0.58
CRAT-209ENST00000467343 NUP155O75694 1391 aa18.66■□□□□ 0.58
CRAT-209ENST00000467343 RRBP1Q9P2E9 1410 aaKnown RBP18.66■□□□□ 0.58
CRAT-209ENST00000467343 SYNMO15061 1565 aa18.65■□□□□ 0.58
CRAT-209ENST00000467343 UBAP1LF5GYI3 381 aa18.65■□□□□ 0.58
CRAT-209ENST00000467343 IDI1Q13907 227 aa18.65■□□□□ 0.58
CRAT-209ENST00000467343 IQSEC2Q5JU85 1478 aa18.65■□□□□ 0.58
CRAT-209ENST00000467343 RPRD2Q5VT52 1461 aaKnown RBP18.65■□□□□ 0.58
CRAT-209ENST00000467343 SCAF1Q9H7N4 1312 aaKnown RBP18.64■□□□□ 0.57
CRAT-209ENST00000467343 SLC52A1Q9NWF4 448 aa18.63■□□□□ 0.57
CRAT-209ENST00000467343 MED14O60244 1454 aa18.63■□□□□ 0.57
CRAT-209ENST00000467343 NOS1P29475 1434 aa18.62■□□□□ 0.57
CRAT-209ENST00000467343 CPS1P31327 1500 aa18.62■□□□□ 0.57
CRAT-209ENST00000467343 IQGAP3Q86VI3 1631 aa18.62■□□□□ 0.57
CRAT-209ENST00000467343 ADGRB3O60242 1522 aa18.61■□□□□ 0.57
CRAT-209ENST00000467343 PPP1R15AO75807 674 aaPredicted RBP18.61■□□□□ 0.57
CRAT-209ENST00000467343 SENP3Q9H4L4 574 aaPredicted RBP18.61■□□□□ 0.57
CRAT-209ENST00000467343 SLIT1O75093 1534 aa18.6■□□□□ 0.57
CRAT-209ENST00000467343 TMEM2Q9UHN6 1383 aa18.6■□□□□ 0.57
CRAT-209ENST00000467343 LTKP29376 864 aa18.6■□□□□ 0.57
CRAT-209ENST00000467343 E9PCH4 1651 aa18.6■□□□□ 0.57
CRAT-209ENST00000467343 TRIM52Q96A61 297 aa18.59■□□□□ 0.57
CRAT-209ENST00000467343 ARHGAP23Q9P227 1491 aa18.58■□□□□ 0.57
CRAT-209ENST00000467343 KDM5AP29375 1690 aaKnown RBP18.58■□□□□ 0.57
CRAT-209ENST00000467343 HDGFP51858 240 aaKnown RBP18.56■□□□□ 0.56
CRAT-209ENST00000467343 PIP4K2BP78356 416 aa18.56■□□□□ 0.56
CRAT-209ENST00000467343 MYO5BQ9ULV0 1848 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms