RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 DDRGK1Q96HY6 314 aa20.67■□□□□ 0.9
CHD1L-205ENST00000467213 MRC2Q9UBG0 1479 aa20.66■□□□□ 0.9
CHD1L-205ENST00000467213 CFDP1Q9UEE9 299 aaPredicted RBP20.66■□□□□ 0.9
CHD1L-205ENST00000467213 CARD11Q9BXL7 1154 aa20.66■□□□□ 0.9
CHD1L-205ENST00000467213 GPRASP1Q5JY77 1395 aa20.65■□□□□ 0.9
CHD1L-205ENST00000467213 EIF4G3O43432 1585 aaKnown RBP20.65■□□□□ 0.9
CHD1L-205ENST00000467213 EXOC6Q8TAG9 804 aa20.64■□□□□ 0.9
CHD1L-205ENST00000467213 PRG4Q92954 1404 aaPredicted RBP20.64■□□□□ 0.89
CHD1L-205ENST00000467213 GRIN2AQ12879 1464 aa20.63■□□□□ 0.89
CHD1L-205ENST00000467213 ABCC10Q5T3U5 1492 aa20.61■□□□□ 0.89
CHD1L-205ENST00000467213 C9orf84Q5VXU9 1444 aa20.6■□□□□ 0.89
CHD1L-205ENST00000467213 COL17A1Q9UMD9 1497 aaPredicted RBP20.6■□□□□ 0.89
CHD1L-205ENST00000467213 PRDM15P57071 1507 aaPredicted RBP20.59■□□□□ 0.89
CHD1L-205ENST00000467213 ZNF608Q9ULD9 1512 aaPredicted RBP20.59■□□□□ 0.89
CHD1L-205ENST00000467213 EIF2AK4Q9P2K8 1649 aaKnown RBP20.59■□□□□ 0.89
CHD1L-205ENST00000467213 PRAG1Q86YV5 1406 aa20.58■□□□□ 0.89
CHD1L-205ENST00000467213 ST20-MTHFSA0A0A6YYL1 179 aa20.58■□□□□ 0.88
CHD1L-205ENST00000467213 NUP155O75694 1391 aa20.57■□□□□ 0.88
CHD1L-205ENST00000467213 PER1O15534 1290 aaPredicted RBP20.57■□□□□ 0.88
CHD1L-205ENST00000467213 NEFMP07197 916 aa20.56■□□□□ 0.88
CHD1L-205ENST00000467213 CLASP1Q7Z460 1538 aa20.55■□□□□ 0.88
CHD1L-205ENST00000467213 UNC13BO14795 1591 aa20.54■□□□□ 0.88
CHD1L-205ENST00000467213 ABCA8O94911 1581 aa20.54■□□□□ 0.88
CHD1L-205ENST00000467213 NUP160Q12769 1436 aa20.53■□□□□ 0.88
CHD1L-205ENST00000467213 MAGI1Q96QZ7 1491 aaPredicted RBP20.53■□□□□ 0.88
CHD1L-205ENST00000467213 POLR3GLQ9BT43 218 aa20.52■□□□□ 0.88
CHD1L-205ENST00000467213 SYNJ2O15056 1496 aa20.52■□□□□ 0.88
CHD1L-205ENST00000467213 FAM135AQ9P2D6 1515 aa20.52■□□□□ 0.87
CHD1L-205ENST00000467213 MAST1Q9Y2H9 1570 aa20.52■□□□□ 0.87
CHD1L-205ENST00000467213 ZNF326Q5BKZ1 582 aaKnown RBP20.51■□□□□ 0.87
CHD1L-205ENST00000467213 KDM2BQ8NHM5 1336 aa20.5■□□□□ 0.87
CHD1L-205ENST00000467213 PLB1Q6P1J6 1458 aa20.49■□□□□ 0.87
CHD1L-205ENST00000467213 CARMIL2Q6F5E8 1435 aa20.49■□□□□ 0.87
CHD1L-205ENST00000467213 RNF17Q9BXT8 1623 aaKnown RBP20.49■□□□□ 0.87
CHD1L-205ENST00000467213 ATP10AO60312 1499 aa20.48■□□□□ 0.87
CHD1L-205ENST00000467213 CCDC141Q6ZP82 1450 aa20.47■□□□□ 0.87
CHD1L-205ENST00000467213 RSPH4AQ5TD94 716 aa20.46■□□□□ 0.87
CHD1L-205ENST00000467213 CENPQQ7L2Z9 268 aaPredicted RBP20.46■□□□□ 0.87
CHD1L-205ENST00000467213 MYO5CQ9NQX4 1742 aa20.45■□□□□ 0.86
CHD1L-205ENST00000467213 PRKCSHP14314 528 aaPredicted RBP20.45■□□□□ 0.86
CHD1L-205ENST00000467213 NPM2Q86SE8 214 aaKnown RBP20.45■□□□□ 0.86
CHD1L-205ENST00000467213 VIRMAQ69YN4 1812 aaKnown RBP20.45■□□□□ 0.86
CHD1L-205ENST00000467213 ARID3CA6NKF2 412 aa20.45■□□□□ 0.86
CHD1L-205ENST00000467213 DCAF11Q8TEB1 546 aa20.44■□□□□ 0.86
CHD1L-205ENST00000467213 IQGAP3Q86VI3 1631 aa20.44■□□□□ 0.86
CHD1L-205ENST00000467213 GSE1Q14687 1217 aa20.44■□□□□ 0.86
CHD1L-205ENST00000467213 CCDC144AA2RUR9 1427 aa20.43■□□□□ 0.86
CHD1L-205ENST00000467213 PREX2Q70Z35 1606 aa20.43■□□□□ 0.86
CHD1L-205ENST00000467213 TSPY4P0CV99 314 aa20.42■□□□□ 0.86
CHD1L-205ENST00000467213 TSPY10P0CW01 314 aa20.42■□□□□ 0.86
CHD1L-205ENST00000467213 IL27Q8NEV9 243 aa20.42■□□□□ 0.86
CHD1L-205ENST00000467213 A2MP01023 1474 aa20.41■□□□□ 0.86
CHD1L-205ENST00000467213 EIF3AQ14152 1382 aaKnown RBP20.41■□□□□ 0.86
CHD1L-205ENST00000467213 ERBINQ96RT1 1412 aa20.41■□□□□ 0.86
CHD1L-205ENST00000467213 TESK2Q96S53 571 aa20.41■□□□□ 0.86
CHD1L-205ENST00000467213 CRBNQ96SW2 442 aa20.41■□□□□ 0.86
CHD1L-205ENST00000467213 LAS1LQ9Y4W2 734 aaKnown RBP20.41■□□□□ 0.86
CHD1L-205ENST00000467213 PLXNC1O60486 1568 aa20.4■□□□□ 0.86
CHD1L-205ENST00000467213 CDCA7LQ96GN5 454 aa20.4■□□□□ 0.86
CHD1L-205ENST00000467213 ATP10BO94823 1461 aa20.39■□□□□ 0.85
CHD1L-205ENST00000467213 FAM161AQ3B820 660 aa20.38■□□□□ 0.85
CHD1L-205ENST00000467213 ZNF521Q96K83 1311 aa20.38■□□□□ 0.85
CHD1L-205ENST00000467213 SAMD9LQ8IVG5 1584 aa20.38■□□□□ 0.85
CHD1L-205ENST00000467213 PLA2R1Q13018 1463 aa20.37■□□□□ 0.85
CHD1L-205ENST00000467213 MAGI2Q86UL8 1455 aa20.37■□□□□ 0.85
CHD1L-205ENST00000467213 CDC42BPBQ9Y5S2 1711 aa20.37■□□□□ 0.85
CHD1L-205ENST00000467213 PLEKHD1A6NEE1 506 aa20.37■□□□□ 0.85
CHD1L-205ENST00000467213 NFKBIBQ15653 356 aa20.37■□□□□ 0.85
CHD1L-205ENST00000467213 ZNF777Q9ULD5 760 aaPredicted RBP20.37■□□□□ 0.85
CHD1L-205ENST00000467213 SYNMO15061 1565 aa20.36■□□□□ 0.85
CHD1L-205ENST00000467213 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.36■□□□□ 0.85
CHD1L-205ENST00000467213 ANO8Q9HCE9 1232 aaPredicted RBP20.36■□□□□ 0.85
CHD1L-205ENST00000467213 NPC1L1Q9UHC9 1359 aa20.36■□□□□ 0.85
CHD1L-205ENST00000467213 IQGAP1P46940 1657 aa20.35■□□□□ 0.85
CHD1L-205ENST00000467213 CNGB1Q14028 1251 aaPredicted RBP20.35■□□□□ 0.85
CHD1L-205ENST00000467213 DISP3Q9P2K9 1392 aa20.35■□□□□ 0.85
CHD1L-205ENST00000467213 KDM2AQ9Y2K7 1162 aa20.34■□□□□ 0.85
CHD1L-205ENST00000467213 PIK3C2GO75747 1445 aa20.34■□□□□ 0.85
CHD1L-205ENST00000467213 TMF1P82094 1093 aa20.33■□□□□ 0.85
CHD1L-205ENST00000467213 SALL2Q9Y467 1007 aaPredicted RBP20.33■□□□□ 0.85
CHD1L-205ENST00000467213 ABCC2Q92887 1545 aa20.33■□□□□ 0.84
CHD1L-205ENST00000467213 WDR7Q9Y4E6 1490 aa20.32■□□□□ 0.84
CHD1L-205ENST00000467213 C8orf34Q49A92 452 aa20.32■□□□□ 0.84
CHD1L-205ENST00000467213 DUSP27Q5VZP5 1158 aa20.32■□□□□ 0.84
CHD1L-205ENST00000467213 NGEFQ8N5V2 710 aa20.32■□□□□ 0.84
CHD1L-205ENST00000467213 TRMT2AQ8IZ69 625 aaKnown RBP20.3■□□□□ 0.84
CHD1L-205ENST00000467213 STAC3Q96MF2 364 aa20.29■□□□□ 0.84
CHD1L-205ENST00000467213 PANK3Q9H999 370 aa20.29■□□□□ 0.84
CHD1L-205ENST00000467213 PLIN1O60240 522 aa20.29■□□□□ 0.84
CHD1L-205ENST00000467213 DAXXQ9UER7 740 aaPredicted RBP20.29■□□□□ 0.84
CHD1L-205ENST00000467213 ZMYM3Q14202 1370 aa20.29■□□□□ 0.84
CHD1L-205ENST00000467213 NINLQ9Y2I6 1382 aa20.28■□□□□ 0.84
CHD1L-205ENST00000467213 PLEKHH1Q9ULM0 1364 aa20.26■□□□□ 0.83
CHD1L-205ENST00000467213 NBPF1Q3BBV0 1214 aa20.26■□□□□ 0.83
CHD1L-205ENST00000467213 MADDQ8WXG6 1647 aa20.26■□□□□ 0.83
CHD1L-205ENST00000467213 DUOX2Q9NRD8 1548 aa20.26■□□□□ 0.83
CHD1L-205ENST00000467213 ASXL1Q8IXJ9 1541 aa20.25■□□□□ 0.83
CHD1L-205ENST00000467213 KIAA1210Q9ULL0 1709 aa20.25■□□□□ 0.83
CHD1L-205ENST00000467213 SENP3-EIF4A1A0A087X0R7 540 aa20.25■□□□□ 0.83
CHD1L-205ENST00000467213 GOLGA2Q08379 1002 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms