RNA–Protein interactions for RNA: ENST00000466704.1

CALD1-214, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 903 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-214ENST00000466704 MAP3K7O43318 606 aa9.43□□□□□ -0.9
CALD1-214ENST00000466704 EN1Q05925 392 aaPredicted RBP9.43□□□□□ -0.9
CALD1-214ENST00000466704 ADAM33Q9BZ11 813 aa9.42□□□□□ -0.9
CALD1-214ENST00000466704 RBM26Q5T8P6 1007 aaKnown RBP9.41□□□□□ -0.9
CALD1-214ENST00000466704 KCNH8Q96L42 1107 aa9.41□□□□□ -0.9
CALD1-214ENST00000466704 PTPREP23469 700 aa9.4□□□□□ -0.9
CALD1-214ENST00000466704 LMOD2Q6P5Q4 547 aa9.4□□□□□ -0.9
CALD1-214ENST00000466704 BCL2L12Q9HB09 334 aa9.4□□□□□ -0.9
CALD1-214ENST00000466704 NUTM2FA1L443 756 aa9.39□□□□□ -0.91
CALD1-214ENST00000466704 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.39□□□□□ -0.91
CALD1-214ENST00000466704 PRIM1P49642 420 aaKnown RBP9.38□□□□□ -0.91
CALD1-214ENST00000466704 C6orf132Q5T0Z8 1188 aa9.38□□□□□ -0.91
CALD1-214ENST00000466704 TSR1Q2NL82 804 aaKnown RBP9.37□□□□□ -0.91
CALD1-214ENST00000466704 KCNK17Q96T54 332 aa9.37□□□□□ -0.91
CALD1-214ENST00000466704 PBX2P40425 430 aa9.36□□□□□ -0.91
CALD1-214ENST00000466704 GPIHBP1Q8IV16 184 aa9.36□□□□□ -0.91
CALD1-214ENST00000466704 AXIN2Q9Y2T1 843 aa9.36□□□□□ -0.91
CALD1-214ENST00000466704 ARHGAP33O14559 1287 aa9.35□□□□□ -0.91
CALD1-214ENST00000466704 CDHR5Q9HBB8 845 aa9.35□□□□□ -0.91
CALD1-214ENST00000466704 PSEN2P49810 448 aa9.34□□□□□ -0.91
CALD1-214ENST00000466704 PPP1R3GB7ZBB8 358 aa9.33□□□□□ -0.92
CALD1-214ENST00000466704 POTEEQ6S8J3 1075 aa9.32□□□□□ -0.92
CALD1-214ENST00000466704 CERKQ8TCT0 537 aa9.32□□□□□ -0.92
CALD1-214ENST00000466704 FCHSD2O94868 740 aa9.31□□□□□ -0.92
CALD1-214ENST00000466704 COL9A1P20849 921 aa9.3□□□□□ -0.92
CALD1-214ENST00000466704 LSM11P83369 360 aaKnown RBP eCLIP9.29□□□□□ -0.92
CALD1-214ENST00000466704 PTGDRQ13258 359 aa9.29□□□□□ -0.92
CALD1-214ENST00000466704 DMRTA1Q5VZB9 504 aa9.28□□□□□ -0.92
CALD1-214ENST00000466704 ANKRD13DQ6ZTN6 518 aa9.28□□□□□ -0.92
CALD1-214ENST00000466704 HIC1Q14526 733 aa9.27□□□□□ -0.93
CALD1-214ENST00000466704 NPDC1Q9NQX5 325 aaPredicted RBP9.27□□□□□ -0.93
CALD1-214ENST00000466704 ZC3H15Q8WU90 426 aaKnown RBP9.26□□□□□ -0.93
CALD1-214ENST00000466704 CDCA7LQ96GN5 454 aa9.26□□□□□ -0.93
CALD1-214ENST00000466704 ZBED2Q9BTP6 218 aa9.26□□□□□ -0.93
CALD1-214ENST00000466704 GNPATO15228 680 aa9.25□□□□□ -0.93
CALD1-214ENST00000466704 PRSS12P56730 875 aa9.25□□□□□ -0.93
CALD1-214ENST00000466704 PROX2Q3B8N5 592 aa9.25□□□□□ -0.93
CALD1-214ENST00000466704 GPR37O15354 613 aa9.24□□□□□ -0.93
CALD1-214ENST00000466704 RBM27Q9P2N5 1060 aaKnown RBP9.24□□□□□ -0.93
CALD1-214ENST00000466704 TRIM6-TRIM34B2RNG4 842 aa9.23□□□□□ -0.93
CALD1-214ENST00000466704 PADI6Q6TGC4 694 aa9.23□□□□□ -0.93
CALD1-214ENST00000466704 TK2O00142 265 aa9.22□□□□□ -0.93
CALD1-214ENST00000466704 ADGRD1Q6QNK2 874 aa9.22□□□□□ -0.93
CALD1-214ENST00000466704 SLC4A5Q9BY07 1137 aa9.22□□□□□ -0.93
CALD1-214ENST00000466704 VPS9D1Q9Y2B5 631 aa9.22□□□□□ -0.93
CALD1-214ENST00000466704 TPRNQ4KMQ1 711 aa9.21□□□□□ -0.94
CALD1-214ENST00000466704 PACS2Q86VP3 889 aa9.21□□□□□ -0.94
CALD1-214ENST00000466704 KRI1Q8N9T8 703 aaKnown RBP9.21□□□□□ -0.94
CALD1-214ENST00000466704 TSKSQ9UJT2 592 aa9.21□□□□□ -0.94
CALD1-214ENST00000466704 ONECUT3O60422 494 aaPredicted RBP9.2□□□□□ -0.94
CALD1-214ENST00000466704 STAC3Q96MF2 364 aa9.2□□□□□ -0.94
CALD1-214ENST00000466704 ZMYND10O75800 440 aa9.19□□□□□ -0.94
CALD1-214ENST00000466704 FECHP22830 423 aa9.19□□□□□ -0.94
CALD1-214ENST00000466704 KIAA1468Q9P260 1216 aa9.19□□□□□ -0.94
CALD1-214ENST00000466704 RABGEF1Q9UJ41 708 aa9.19□□□□□ -0.94
CALD1-214ENST00000466704 NBPF26B4DH59 902 aa9.18□□□□□ -0.94
CALD1-214ENST00000466704 BARGINQ6ZT62 677 aa9.18□□□□□ -0.94
CALD1-214ENST00000466704 NBPF3Q9H094 633 aa9.18□□□□□ -0.94
CALD1-214ENST00000466704 FAM198AQ9UFP1 575 aa9.18□□□□□ -0.94
CALD1-214ENST00000466704 MAP2K5Q13163 448 aa9.17□□□□□ -0.94
CALD1-214ENST00000466704 PNMA3Q9UL41 463 aa9.17□□□□□ -0.94
CALD1-214ENST00000466704 NUDT18Q6ZVK8 323 aa9.16□□□□□ -0.94
CALD1-214ENST00000466704 TTC13Q8NBP0 860 aa9.16□□□□□ -0.94
CALD1-214ENST00000466704 MRPL50Q8N5N7 158 aaKnown RBP9.15□□□□□ -0.94
CALD1-214ENST00000466704 TATDN2Q93075 761 aa9.15□□□□□ -0.94
CALD1-214ENST00000466704 SEPT9Q9UHD8 586 aaPredicted RBP9.15□□□□□ -0.94
CALD1-214ENST00000466704 MINK1Q8N4C8 1332 aaPredicted RBP9.14□□□□□ -0.95
CALD1-214ENST00000466704 SMAPO00193 183 aa9.14□□□□□ -0.95
CALD1-214ENST00000466704 HRO43593 1189 aa9.14□□□□□ -0.95
CALD1-214ENST00000466704 FAM161AQ3B820 660 aa9.14□□□□□ -0.95
CALD1-214ENST00000466704 RBM46Q8TBY0 533 aaKnown RBP9.14□□□□□ -0.95
CALD1-214ENST00000466704 PLA2G2EQ9NZK7 142 aa9.14□□□□□ -0.95
CALD1-214ENST00000466704 HCSTQ9UBK5 93 aa9.14□□□□□ -0.95
CALD1-214ENST00000466704 BHMG1C9JSJ3 638 aaPredicted RBP9.13□□□□□ -0.95
CALD1-214ENST00000466704 IRF6O14896 467 aa9.13□□□□□ -0.95
CALD1-214ENST00000466704 OATP04181 439 aa9.13□□□□□ -0.95
CALD1-214ENST00000466704 ADGRG1Q9Y653 693 aa9.13□□□□□ -0.95
CALD1-214ENST00000466704 GOLGA8CPA6NN73 597 aa9.12□□□□□ -0.95
CALD1-214ENST00000466704 CCDC102AQ96A19 550 aa9.12□□□□□ -0.95
CALD1-214ENST00000466704 SLC24A3Q9HC58 644 aa9.11□□□□□ -0.95
CALD1-214ENST00000466704 C3orf80F5H4A9 247 aa9.1□□□□□ -0.95
CALD1-214ENST00000466704 PRKCSHP14314 528 aaPredicted RBP9.1□□□□□ -0.95
CALD1-214ENST00000466704 FAM98CQ17RN3 349 aaKnown RBP9.1□□□□□ -0.95
CALD1-214ENST00000466704 LAPTM4BQ86VI4 370 aa9.1□□□□□ -0.95
CALD1-214ENST00000466704 METTL3Q86U44 580 aaKnown RBP9.09□□□□□ -0.95
CALD1-214ENST00000466704 PXYLP1Q8TE99 480 aa9.09□□□□□ -0.95
CALD1-214ENST00000466704 HDGFP51858 240 aaKnown RBP9.08□□□□□ -0.96
CALD1-214ENST00000466704 AK7Q96M32 723 aa9.08□□□□□ -0.96
CALD1-214ENST00000466704 EYA1Q99502 592 aa9.08□□□□□ -0.96
CALD1-214ENST00000466704 DNAJB2P25686 324 aa9.07□□□□□ -0.96
CALD1-214ENST00000466704 ZFRQ96KR1 1074 aaKnown RBP9.07□□□□□ -0.96
CALD1-214ENST00000466704 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.06□□□□□ -0.96
CALD1-214ENST00000466704 RCCD1A6NED2 376 aa9.06□□□□□ -0.96
CALD1-214ENST00000466704 WNT2BQ93097 391 aa9.05□□□□□ -0.96
CALD1-214ENST00000466704 ANKK1Q8NFD2 765 aa9.04□□□□□ -0.96
CALD1-214ENST00000466704 SAMD7Q7Z3H4 446 aa9.03□□□□□ -0.96
CALD1-214ENST00000466704 NLRP7Q8WX94 980 aa9.03□□□□□ -0.96
CALD1-214ENST00000466704 KCTD12Q96CX2 325 aaKnown RBP9.03□□□□□ -0.96
CALD1-214ENST00000466704 TRIM66O15016 1216 aa9.02□□□□□ -0.97
CALD1-214ENST00000466704 RNF40O75150 1001 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms