RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 FBXO31Q5XUX0 539 aaPredicted RBP30.04■■■□□ 2.4
SRSF4-202ENST00000466448 DNMT1P26358 1616 aaKnown RBP30.04■■■□□ 2.4
SRSF4-202ENST00000466448 FAM135AQ9P2D6 1515 aa30.02■■■□□ 2.4
SRSF4-202ENST00000466448 ARHGEF5Q12774 1597 aa30.02■■■□□ 2.4
SRSF4-202ENST00000466448 PZPP20742 1482 aa30.01■■■□□ 2.4
SRSF4-202ENST00000466448 TNRQ92752 1358 aa30.01■■■□□ 2.39
SRSF4-202ENST00000466448 LRRC9Q6ZRR7 1453 aa29.99■■■□□ 2.39
SRSF4-202ENST00000466448 WASHC2CQ9Y4E1 1318 aa29.99■■■□□ 2.39
SRSF4-202ENST00000466448 VPS8Q8N3P4 1428 aa29.99■■■□□ 2.39
SRSF4-202ENST00000466448 TSPY4P0CV99 314 aa29.97■■■□□ 2.39
SRSF4-202ENST00000466448 TSPY10P0CW01 314 aa29.97■■■□□ 2.39
SRSF4-202ENST00000466448 ILDR2Q71H61 639 aa29.96■■■□□ 2.39
SRSF4-202ENST00000466448 UBAP1LF5GYI3 381 aa29.94■■■□□ 2.38
SRSF4-202ENST00000466448 LOC105371045A0A1W2PR82 267 aa29.93■■■□□ 2.38
SRSF4-202ENST00000466448 SPATA31D1Q6ZQQ2 1576 aa29.92■■■□□ 2.38
SRSF4-202ENST00000466448 NEURL4Q96JN8 1562 aa29.9■■■□□ 2.38
SRSF4-202ENST00000466448 MIA2Q96PC5 1412 aa29.9■■■□□ 2.38
SRSF4-202ENST00000466448 KANK4Q5T7N3 995 aaPredicted RBP29.88■■■□□ 2.37
SRSF4-202ENST00000466448 MAST1Q9Y2H9 1570 aa29.87■■■□□ 2.37
SRSF4-202ENST00000466448 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.87■■■□□ 2.372e-23■□□□□ 10.7
SRSF4-202ENST00000466448 NLRP1Q9C000 1473 aa29.87■■■□□ 2.37
SRSF4-202ENST00000466448 POLR1AO95602 1720 aaPredicted RBP29.86■■■□□ 2.37
SRSF4-202ENST00000466448 MAP3K1Q13233 1512 aa29.85■■■□□ 2.37
SRSF4-202ENST00000466448 RNF17Q9BXT8 1623 aaKnown RBP29.85■■■□□ 2.37
SRSF4-202ENST00000466448 UGGT1Q9NYU2 1555 aa29.83■■■□□ 2.37
SRSF4-202ENST00000466448 ABCC3O15438 1527 aa29.83■■■□□ 2.37
SRSF4-202ENST00000466448 THEMISQ8N1K5 641 aaPredicted RBP29.83■■■□□ 2.37
SRSF4-202ENST00000466448 MYOM3Q5VTT5 1437 aa29.82■■■□□ 2.36
SRSF4-202ENST00000466448 ANKLE2Q86XL3 938 aa29.82■■■□□ 2.36
SRSF4-202ENST00000466448 SHANK2Q9UPX8 1470 aa29.8■■■□□ 2.36
SRSF4-202ENST00000466448 CPS1P31327 1500 aa29.8■■■□□ 2.36
SRSF4-202ENST00000466448 SOCS7O14512 581 aa29.79■■■□□ 2.36
SRSF4-202ENST00000466448 EIF2AK4Q9P2K8 1649 aaKnown RBP29.78■■■□□ 2.36
SRSF4-202ENST00000466448 ZC3H13Q5T200 1668 aaKnown RBP29.78■■■□□ 2.36
SRSF4-202ENST00000466448 MROH1Q8NDA8 1641 aa29.77■■■□□ 2.36
SRSF4-202ENST00000466448 MED14O60244 1454 aa29.76■■■□□ 2.35
SRSF4-202ENST00000466448 NPHP4O75161 1426 aaPredicted RBP29.76■■■□□ 2.35
SRSF4-202ENST00000466448 VWDEQ8N2E2 1590 aa29.74■■■□□ 2.35
SRSF4-202ENST00000466448 DEPDC5O75140 1603 aa29.74■■■□□ 2.35
SRSF4-202ENST00000466448 ERVK-7P63135 1459 aa29.74■■■□□ 2.35
SRSF4-202ENST00000466448 DUOX2Q9NRD8 1548 aa29.71■■■□□ 2.35
SRSF4-202ENST00000466448 SCAF1Q9H7N4 1312 aaKnown RBP29.69■■■□□ 2.34
SRSF4-202ENST00000466448 TOM1O60784 492 aa29.68■■■□□ 2.34
SRSF4-202ENST00000466448 PIP4K2BP78356 416 aa29.68■■■□□ 2.34
SRSF4-202ENST00000466448 IQGAP1P46940 1657 aa29.66■■■□□ 2.34
SRSF4-202ENST00000466448 KIF15Q9NS87 1388 aa29.65■■■□□ 2.34
SRSF4-202ENST00000466448 ABCC5O15440 1437 aa29.65■■■□□ 2.34
SRSF4-202ENST00000466448 HSPA1LP34931 641 aa29.65■■■□□ 2.34
SRSF4-202ENST00000466448 CEP152O94986 1710 aa29.65■■■□□ 2.34
SRSF4-202ENST00000466448 PRDM15P57071 1507 aaPredicted RBP29.62■■■□□ 2.33
SRSF4-202ENST00000466448 ERBINQ96RT1 1412 aa29.62■■■□□ 2.33
SRSF4-202ENST00000466448 RRP7BPQ9NSQ0 103 aa29.61■■■□□ 2.33
SRSF4-202ENST00000466448 PTPN23Q9H3S7 1636 aa29.6■■■□□ 2.33
SRSF4-202ENST00000466448 CROCC2H7BZ55 1655 aa29.6■■■□□ 2.33
SRSF4-202ENST00000466448 ARHGAP31Q2M1Z3 1444 aa29.59■■■□□ 2.33
SRSF4-202ENST00000466448 UBR1Q8IWV7 1749 aa29.58■■■□□ 2.33
SRSF4-202ENST00000466448 ALKQ9UM73 1620 aa29.58■■■□□ 2.33
SRSF4-202ENST00000466448 DAPK1P53355 1430 aa29.57■■■□□ 2.32
SRSF4-202ENST00000466448 APLP2Q06481 763 aa29.57■■■□□ 2.32
SRSF4-202ENST00000466448 LRRC7Q96NW7 1537 aa29.55■■■□□ 2.32
SRSF4-202ENST00000466448 SCAF11Q99590 1463 aaKnown RBP29.55■■■□□ 2.32
SRSF4-202ENST00000466448 FGD6Q6ZV73 1430 aa29.54■■■□□ 2.32
SRSF4-202ENST00000466448 STRCP1A6NGW2 1772 aa29.54■■■□□ 2.32
SRSF4-202ENST00000466448 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.53■■■□□ 2.324e-7■■□□□ 13
SRSF4-202ENST00000466448 ARHGAP23Q9P227 1491 aa29.53■■■□□ 2.32
SRSF4-202ENST00000466448 SLIT1O75093 1534 aa29.51■■■□□ 2.32
SRSF4-202ENST00000466448 LTKP29376 864 aa29.51■■■□□ 2.31
SRSF4-202ENST00000466448 SYNMO15061 1565 aa29.5■■■□□ 2.31
SRSF4-202ENST00000466448 MED1Q15648 1581 aaPredicted RBP29.5■■■□□ 2.31
SRSF4-202ENST00000466448 TXNDC2Q86VQ3 553 aa29.49■■■□□ 2.31
SRSF4-202ENST00000466448 KANK1Q14678 1352 aa29.47■■■□□ 2.31
SRSF4-202ENST00000466448 CHIC2Q9UKJ5 165 aa29.46■■■□□ 2.31
SRSF4-202ENST00000466448 ANKRD30AQ9BXX3 1397 aa29.46■■■□□ 2.31
SRSF4-202ENST00000466448 CFAP65Q6ZU64 1925 aaKnown RBP29.45■■■□□ 2.31
SRSF4-202ENST00000466448 PIK3C2BO00750 1634 aa29.44■■■□□ 2.3
SRSF4-202ENST00000466448 LMTK2Q8IWU2 1503 aa29.43■■■□□ 2.3
SRSF4-202ENST00000466448 TMEM2Q9UHN6 1383 aa29.42■■■□□ 2.3
SRSF4-202ENST00000466448 EID1Q9Y6B2 187 aa29.42■■■□□ 2.3
SRSF4-202ENST00000466448 STAG3Q9UJ98 1225 aa29.38■■■□□ 2.29
SRSF4-202ENST00000466448 IDI1Q13907 227 aa29.37■■■□□ 2.29
SRSF4-202ENST00000466448 SENP3Q9H4L4 574 aaPredicted RBP29.37■■■□□ 2.29
SRSF4-202ENST00000466448 EFCAB6Q5THR3 1501 aa29.36■■■□□ 2.29
SRSF4-202ENST00000466448 ADGRL2O95490 1459 aa29.34■■■□□ 2.29
SRSF4-202ENST00000466448 NOS1P29475 1434 aa29.33■■■□□ 2.29
SRSF4-202ENST00000466448 KDM5AP29375 1690 aaKnown RBP29.33■■■□□ 2.29
SRSF4-202ENST00000466448 FAM50AQ14320 339 aaKnown RBP29.28■■■□□ 2.28
SRSF4-202ENST00000466448 PHF23Q9BUL5 403 aaPredicted RBP29.28■■■□□ 2.28
SRSF4-202ENST00000466448 XIRP1Q702N8 1843 aaKnown RBP29.27■■■□□ 2.28
SRSF4-202ENST00000466448 ADGRB3O60242 1522 aa29.26■■■□□ 2.27
SRSF4-202ENST00000466448 TET3O43151 1660 aa29.25■■■□□ 2.27
SRSF4-202ENST00000466448 SLC26A8Q96RN1 970 aa29.25■■■□□ 2.27
SRSF4-202ENST00000466448 ANKRD50Q9ULJ7 1429 aa29.25■■■□□ 2.27
SRSF4-202ENST00000466448 TMEM94Q12767 1356 aa29.24■■■□□ 2.27
SRSF4-202ENST00000466448 KCNA6P17658 529 aa29.23■■■□□ 2.27
SRSF4-202ENST00000466448 SLC52A1Q9NWF4 448 aa29.23■■■□□ 2.27
SRSF4-202ENST00000466448 RPRD2Q5VT52 1461 aaKnown RBP29.21■■■□□ 2.27
SRSF4-202ENST00000466448 FAM135BQ49AJ0 1406 aa29.18■■■□□ 2.26
SRSF4-202ENST00000466448 PROSER2Q86WR7 435 aaPredicted RBP29.16■■■□□ 2.26
SRSF4-202ENST00000466448 RBM33Q96EV2 1170 aaKnown RBP29.16■■■□□ 2.26
SRSF4-202ENST00000466448 NWD1Q149M9 1564 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms