RNA–Protein interactions for RNA: ENST00000466441.5

UBP1-207, Transcript of upstream binding protein 1, humanhuman

TSL 1 (best)

Gene UBP1, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-207ENST00000466441 GTF3C3Q9Y5Q9 886 aa8.93□□□□□ -0.98
UBP1-207ENST00000466441 PRIM1P49642 420 aaKnown RBP8.92□□□□□ -0.98
UBP1-207ENST00000466441 FOSBP53539 338 aa8.92□□□□□ -0.98
UBP1-207ENST00000466441 NACADO15069 1562 aa8.91□□□□□ -0.98
UBP1-207ENST00000466441 PSDA5PKW4 1024 aaPredicted RBP8.91□□□□□ -0.98
UBP1-207ENST00000466441 HOXB3P14651 431 aaPredicted RBP8.91□□□□□ -0.98
UBP1-207ENST00000466441 CCDC102AQ96A19 550 aa8.91□□□□□ -0.98
UBP1-207ENST00000466441 ARSIQ5FYB1 569 aa8.9□□□□□ -0.98
UBP1-207ENST00000466441 ZDHHC16Q969W1 377 aa8.9□□□□□ -0.98
UBP1-207ENST00000466441 RBM33Q96EV2 1170 aaKnown RBP8.9□□□□□ -0.98
UBP1-207ENST00000466441 UNC13AQ9UPW8 1703 aa8.9□□□□□ -0.98
UBP1-207ENST00000466441 SHROOM4Q9ULL8 1493 aa8.89□□□□□ -0.99
UBP1-207ENST00000466441 NUDT7P0C024 238 aa8.89□□□□□ -0.99
UBP1-207ENST00000466441 GPR153Q6NV75 609 aa8.89□□□□□ -0.99
UBP1-207ENST00000466441 ZNF454Q8N9F8 522 aa8.89□□□□□ -0.99
UBP1-207ENST00000466441 RB1CC1Q8TDY2 1594 aa8.89□□□□□ -0.99
UBP1-207ENST00000466441 SCRIBQ14160 1630 aa8.88□□□□□ -0.99
UBP1-207ENST00000466441 AMHR2Q16671 573 aa8.88□□□□□ -0.99
UBP1-207ENST00000466441 KDM4CQ9H3R0 1056 aa8.88□□□□□ -0.99
UBP1-207ENST00000466441 NPDC1Q9NQX5 325 aaPredicted RBP8.88□□□□□ -0.99
UBP1-207ENST00000466441 C6orf132Q5T0Z8 1188 aa8.87□□□□□ -0.99
UBP1-207ENST00000466441 MYO15BQ96JP2 1530 aa8.86□□□□□ -0.99
UBP1-207ENST00000466441 FECHP22830 423 aa8.86□□□□□ -0.99
UBP1-207ENST00000466441 TSR1Q2NL82 804 aaKnown RBP8.86□□□□□ -0.99
UBP1-207ENST00000466441 CDHR5Q9HBB8 845 aa8.86□□□□□ -0.99
UBP1-207ENST00000466441 GPBP1L1Q9HC44 474 aaPredicted RBP8.86□□□□□ -0.99
UBP1-207ENST00000466441 PPP4R3BQ5MIZ7 849 aa8.85□□□□□ -0.99
UBP1-207ENST00000466441 RBM27Q9P2N5 1060 aaKnown RBP8.85□□□□□ -0.99
UBP1-207ENST00000466441 OATP04181 439 aa8.83□□□□□ -1
UBP1-207ENST00000466441 KHSRPQ92945 711 aaKnown RBP eCLIP8.83□□□□□ -19e-8■■■□□ 15.2
UBP1-207ENST00000466441 DDRGK1Q96HY6 314 aa8.83□□□□□ -1
UBP1-207ENST00000466441 LHX6Q9UPM6 363 aa8.83□□□□□ -1
UBP1-207ENST00000466441 HOXB1P14653 301 aaPredicted RBP8.82□□□□□ -1
UBP1-207ENST00000466441 TTLL12Q14166 644 aaPredicted RBP8.81□□□□□ -1
UBP1-207ENST00000466441 IL27Q8NEV9 243 aa8.81□□□□□ -1
UBP1-207ENST00000466441 ADAM33Q9BZ11 813 aa8.81□□□□□ -1
UBP1-207ENST00000466441 CLCN1P35523 988 aa8.8□□□□□ -1
UBP1-207ENST00000466441 PARP9Q8IXQ6 854 aa8.8□□□□□ -1
UBP1-207ENST00000466441 PRSS12P56730 875 aa8.79□□□□□ -1
UBP1-207ENST00000466441 BCL2L12Q9HB09 334 aa8.79□□□□□ -1
UBP1-207ENST00000466441 PTPREP23469 700 aa8.78□□□□□ -1
UBP1-207ENST00000466441 PADI6Q6TGC4 694 aa8.78□□□□□ -1
UBP1-207ENST00000466441 TTC13Q8NBP0 860 aa8.77□□□□□ -1.01
UBP1-207ENST00000466441 KCNH8Q96L42 1107 aa8.77□□□□□ -1.01
UBP1-207ENST00000466441 GPCPD1Q9NPB8 672 aa8.77□□□□□ -1.01
UBP1-207ENST00000466441 RBM46Q8TBY0 533 aaKnown RBP8.76□□□□□ -1.01
UBP1-207ENST00000466441 CDCA7LQ96GN5 454 aa8.76□□□□□ -1.01
UBP1-207ENST00000466441 POTEMA6NI47 508 aa8.75□□□□□ -1.01
UBP1-207ENST00000466441 PPP1R3GB7ZBB8 358 aa8.75□□□□□ -1.01
UBP1-207ENST00000466441 GIGYF2Q6Y7W6 1299 aaKnown RBP8.75□□□□□ -1.01
UBP1-207ENST00000466441 METTL3Q86U44 580 aaKnown RBP8.75□□□□□ -1.01
UBP1-207ENST00000466441 FAM117AQ9C073 453 aa8.75□□□□□ -1.01
UBP1-207ENST00000466441 ADGRG1Q9Y653 693 aa8.75□□□□□ -1.01
UBP1-207ENST00000466441 BICRAQ9NZM4 1560 aa8.73□□□□□ -1.01
UBP1-207ENST00000466441 POTEGQ6S5H5 508 aa8.73□□□□□ -1.01
UBP1-207ENST00000466441 PXYLP1Q8TE99 480 aa8.73□□□□□ -1.01
UBP1-207ENST00000466441 TMUB1Q9BVT8 246 aa8.73□□□□□ -1.01
UBP1-207ENST00000466441 ONECUT3O60422 494 aaPredicted RBP8.72□□□□□ -1.01
UBP1-207ENST00000466441 MDM2Q00987 491 aaPredicted RBP8.72□□□□□ -1.01
UBP1-207ENST00000466441 GOPCQ9HD26 462 aa8.72□□□□□ -1.01
UBP1-207ENST00000466441 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.71□□□□□ -1.02
UBP1-207ENST00000466441 PACS2Q86VP3 889 aa8.71□□□□□ -1.02
UBP1-207ENST00000466441 PLSCR2Q9NRY7 297 aa8.71□□□□□ -1.02
UBP1-207ENST00000466441 COL9A1P20849 921 aa8.7□□□□□ -1.02
UBP1-207ENST00000466441 SSTR3P32745 418 aaPredicted RBP8.7□□□□□ -1.02
UBP1-207ENST00000466441 LCE2DQ5TA82 110 aaPredicted RBP8.7□□□□□ -1.02
UBP1-207ENST00000466441 PCDH10Q9P2E7 1040 aa8.7□□□□□ -1.02
UBP1-207ENST00000466441 PLEKHG3A1L390 1219 aa8.69□□□□□ -1.02
UBP1-207ENST00000466441 NBPF26B4DH59 902 aa8.69□□□□□ -1.02
UBP1-207ENST00000466441 C14orf37Q86TY3 774 aa8.69□□□□□ -1.02
UBP1-207ENST00000466441 PHOX2BQ99453 314 aa8.69□□□□□ -1.02
UBP1-207ENST00000466441 RSPH6AQ9H0K4 717 aa8.69□□□□□ -1.02
UBP1-207ENST00000466441 TRIM6-TRIM34B2RNG4 842 aa8.68□□□□□ -1.02
UBP1-207ENST00000466441 MS4A1P11836 297 aa8.68□□□□□ -1.02
UBP1-207ENST00000466441 FAM161AQ3B820 660 aa8.68□□□□□ -1.02
UBP1-207ENST00000466441 REPIN1Q9BWE0 567 aaKnown RBP8.68□□□□□ -1.02
UBP1-207ENST00000466441 TIMELESSQ9UNS1 1208 aa8.68□□□□□ -1.02
UBP1-207ENST00000466441 ST18O60284 1047 aa8.67□□□□□ -1.02
UBP1-207ENST00000466441 ERBB3P21860 1342 aa8.67□□□□□ -1.02
UBP1-207ENST00000466441 FAM217BQ9NTX9 383 aaPredicted RBP8.67□□□□□ -1.02
UBP1-207ENST00000466441 DIXDC1Q155Q3 683 aa8.66□□□□□ -1.02
UBP1-207ENST00000466441 PCMTD1Q96MG8 357 aaPredicted RBP8.66□□□□□ -1.02
UBP1-207ENST00000466441 KCNK17Q96T54 332 aa8.66□□□□□ -1.02
UBP1-207ENST00000466441 EYA1Q99502 592 aa8.66□□□□□ -1.02
UBP1-207ENST00000466441 TSKSQ9UJT2 592 aa8.66□□□□□ -1.02
UBP1-207ENST00000466441 RCCD1A6NED2 376 aa8.65□□□□□ -1.02
UBP1-207ENST00000466441 DNAJB2P25686 324 aa8.65□□□□□ -1.02
UBP1-207ENST00000466441 NUDT18Q6ZVK8 323 aa8.65□□□□□ -1.02
UBP1-207ENST00000466441 TATDN2Q93075 761 aa8.65□□□□□ -1.02
UBP1-207ENST00000466441 PNMA3Q9UL41 463 aa8.65□□□□□ -1.02
UBP1-207ENST00000466441 ARHGAP33O14559 1287 aa8.64□□□□□ -1.03
UBP1-207ENST00000466441 PBX2P40425 430 aa8.64□□□□□ -1.03
UBP1-207ENST00000466441 SH3D19Q5HYK7 790 aa8.64□□□□□ -1.03
UBP1-207ENST00000466441 SULF1Q8IWU6 871 aa8.64□□□□□ -1.03
UBP1-207ENST00000466441 BEGAINQ9BUH8 593 aa8.64□□□□□ -1.03
UBP1-207ENST00000466441 FAM198AQ9UFP1 575 aa8.64□□□□□ -1.03
UBP1-207ENST00000466441 FAM163AQ96GL9 167 aaPredicted RBP8.63□□□□□ -1.03
UBP1-207ENST00000466441 SLC4A5Q9BY07 1137 aa8.63□□□□□ -1.03
UBP1-207ENST00000466441 VARS2Q5ST30 1063 aaKnown RBP8.62□□□□□ -1.03
UBP1-207ENST00000466441 EMP3P54852 163 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms