RNA–Protein interactions for RNA: ENST00000466437.1

PDK1-209, Transcript of pyruvate dehydrogenase kinase 1, humanhuman

TSL 4

Gene PDK1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK1-209ENST00000466437 NCKAP5LQ9HCH0 1330 aa13.36□□□□□ -0.27
PDK1-209ENST00000466437 UBAP1LF5GYI3 381 aa13.35□□□□□ -0.27
PDK1-209ENST00000466437 EHMT2Q96KQ7 1210 aa13.35□□□□□ -0.27
PDK1-209ENST00000466437 CNTLNQ9NXG0 1405 aa13.35□□□□□ -0.27
PDK1-209ENST00000466437 MYO3AQ8NEV4 1616 aa13.35□□□□□ -0.27
PDK1-209ENST00000466437 MROH2AA6NES4 1674 aa13.34□□□□□ -0.27
PDK1-209ENST00000466437 CLIP1P30622 1438 aa13.33□□□□□ -0.28
PDK1-209ENST00000466437 NPATQ14207 1427 aa13.33□□□□□ -0.28
PDK1-209ENST00000466437 EVX2Q03828 476 aa13.33□□□□□ -0.28
PDK1-209ENST00000466437 ESF1Q9H501 851 aaKnown RBP13.33□□□□□ -0.28
PDK1-209ENST00000466437 ZNF142P52746 1687 aaPredicted RBP13.33□□□□□ -0.28
PDK1-209ENST00000466437 MED1Q15648 1581 aaPredicted RBP13.32□□□□□ -0.28
PDK1-209ENST00000466437 MKRN4PQ13434 485 aaPredicted RBP13.32□□□□□ -0.28
PDK1-209ENST00000466437 CDK11AQ9UQ88 783 aaPredicted RBP13.32□□□□□ -0.28
PDK1-209ENST00000466437 CLTCQ00610 1675 aaKnown RBP13.31□□□□□ -0.28
PDK1-209ENST00000466437 CDC42BPAQ5VT25 1732 aa13.31□□□□□ -0.28
PDK1-209ENST00000466437 SPDYE1Q8NFV5 336 aaPredicted RBP13.31□□□□□ -0.28
PDK1-209ENST00000466437 SAMD9LQ8IVG5 1584 aa13.31□□□□□ -0.28
PDK1-209ENST00000466437 SUPT6HQ7KZ85 1726 aaKnown RBP13.3□□□□□ -0.28
PDK1-209ENST00000466437 TCOF1Q13428 1488 aaKnown RBP13.3□□□□□ -0.28
PDK1-209ENST00000466437 CEP170BQ9Y4F5 1589 aaPredicted RBP13.3□□□□□ -0.28
PDK1-209ENST00000466437 CLEC11AQ9Y240 323 aa13.3□□□□□ -0.28
PDK1-209ENST00000466437 PLA2R1Q13018 1463 aa13.29□□□□□ -0.28
PDK1-209ENST00000466437 PRKAR2AP13861 404 aaKnown RBP13.29□□□□□ -0.28
PDK1-209ENST00000466437 ZMYM3Q14202 1370 aa13.29□□□□□ -0.28
PDK1-209ENST00000466437 SYCP2Q9BX26 1530 aa13.29□□□□□ -0.28
PDK1-209ENST00000466437 PTPRKQ15262 1439 aa13.27□□□□□ -0.29
PDK1-209ENST00000466437 PLXNC1O60486 1568 aa13.27□□□□□ -0.29
PDK1-209ENST00000466437 HSPA1LP34931 641 aa13.26□□□□□ -0.29
PDK1-209ENST00000466437 SSUH2Q9Y2M2 353 aa13.26□□□□□ -0.29
PDK1-209ENST00000466437 UBTFP17480 764 aaKnown RBP13.25□□□□□ -0.29
PDK1-209ENST00000466437 INO80Q9ULG1 1556 aaPredicted RBP13.24□□□□□ -0.29
PDK1-209ENST00000466437 ATP7AQ04656 1500 aa13.24□□□□□ -0.29
PDK1-209ENST00000466437 PKD2Q13563 968 aa13.24□□□□□ -0.29
PDK1-209ENST00000466437 ZNF692Q9BU19 519 aaPredicted RBP13.24□□□□□ -0.29
PDK1-209ENST00000466437 NEURL4Q96JN8 1562 aa13.23□□□□□ -0.29
PDK1-209ENST00000466437 PIP4K2BP78356 416 aa13.22□□□□□ -0.29
PDK1-209ENST00000466437 ZNF777Q9ULD5 760 aaPredicted RBP13.22□□□□□ -0.29
PDK1-209ENST00000466437 DNMT1P26358 1616 aaKnown RBP13.21□□□□□ -0.29
PDK1-209ENST00000466437 ALKQ9UM73 1620 aa13.21□□□□□ -0.29
PDK1-209ENST00000466437 SPAG9O60271 1321 aaKnown RBP13.21□□□□□ -0.29
PDK1-209ENST00000466437 A2MP01023 1474 aa13.21□□□□□ -0.3
PDK1-209ENST00000466437 CCDC18Q5T9S5 1454 aa13.21□□□□□ -0.3
PDK1-209ENST00000466437 CASKIN1Q8WXD9 1431 aa13.21□□□□□ -0.3
PDK1-209ENST00000466437 GPATCH8Q9UKJ3 1502 aaKnown RBP13.2□□□□□ -0.3
PDK1-209ENST00000466437 POLR1AO95602 1720 aaPredicted RBP13.2□□□□□ -0.3
PDK1-209ENST00000466437 HNRNPMP52272 730 aaKnown RBP eCLIP13.2□□□□□ -0.33e-8■■■■■ 32.4
PDK1-209ENST00000466437 A2ML1A8K2U0 1454 aa13.2□□□□□ -0.3
PDK1-209ENST00000466437 GGT6Q6P531 493 aa13.18□□□□□ -0.3
PDK1-209ENST00000466437 CPS1P31327 1500 aa13.18□□□□□ -0.3
PDK1-209ENST00000466437 SHANK2Q9UPX8 1470 aa13.16□□□□□ -0.3
PDK1-209ENST00000466437 VWDEQ8N2E2 1590 aa13.16□□□□□ -0.3
PDK1-209ENST00000466437 ADGBQ8N7X0 1667 aa13.15□□□□□ -0.3
PDK1-209ENST00000466437 C19orf67A6NJJ6 358 aa13.15□□□□□ -0.3
PDK1-209ENST00000466437 KIAA1107Q9UPP5 1409 aa13.14□□□□□ -0.31
PDK1-209ENST00000466437 FYCO1Q9BQS8 1478 aa13.14□□□□□ -0.31
PDK1-209ENST00000466437 TOM1O60784 492 aa13.13□□□□□ -0.31
PDK1-209ENST00000466437 TNRQ92752 1358 aa13.12□□□□□ -0.31
PDK1-209ENST00000466437 FBXO31Q5XUX0 539 aaPredicted RBP13.12□□□□□ -0.31
PDK1-209ENST00000466437 STRCP1A6NGW2 1772 aa13.12□□□□□ -0.31
PDK1-209ENST00000466437 PLEKHH2Q8IVE3 1493 aa13.11□□□□□ -0.31
PDK1-209ENST00000466437 ZNF644Q9H582 1327 aaPredicted RBP13.1□□□□□ -0.31
PDK1-209ENST00000466437 PZPP20742 1482 aa13.1□□□□□ -0.31
PDK1-209ENST00000466437 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.09□□□□□ -0.31
PDK1-209ENST00000466437 CFDP1Q9UEE9 299 aaPredicted RBP13.09□□□□□ -0.31
PDK1-209ENST00000466437 MBD5Q9P267 1494 aa13.09□□□□□ -0.31
PDK1-209ENST00000466437 CCNB3Q8WWL7 1395 aa13.08□□□□□ -0.31
PDK1-209ENST00000466437 TIAM1Q13009 1591 aa13.08□□□□□ -0.32
PDK1-209ENST00000466437 KDM5DQ9BY66 1539 aa13.08□□□□□ -0.32
PDK1-209ENST00000466437 NPHP4O75161 1426 aaPredicted RBP13.07□□□□□ -0.32
PDK1-209ENST00000466437 DEPDC5O75140 1603 aa13.07□□□□□ -0.32
PDK1-209ENST00000466437 CHADLQ6NUI6 762 aa13.07□□□□□ -0.32
PDK1-209ENST00000466437 IQGAP1P46940 1657 aa13.07□□□□□ -0.32
PDK1-209ENST00000466437 RNF17Q9BXT8 1623 aaKnown RBP13.06□□□□□ -0.32
PDK1-209ENST00000466437 MED14O60244 1454 aa13.06□□□□□ -0.32
PDK1-209ENST00000466437 LRRC7Q96NW7 1537 aa13.06□□□□□ -0.32
PDK1-209ENST00000466437 RGS17Q9UGC6 210 aaPredicted RBP13.05□□□□□ -0.32
PDK1-209ENST00000466437 UGGT1Q9NYU2 1555 aa13.05□□□□□ -0.32
PDK1-209ENST00000466437 DHX29Q7Z478 1369 aaKnown RBP13.05□□□□□ -0.32
PDK1-209ENST00000466437 SYNMO15061 1565 aa13.04□□□□□ -0.32
PDK1-209ENST00000466437 ANKLE2Q86XL3 938 aa13.04□□□□□ -0.32
PDK1-209ENST00000466437 KIF3BO15066 747 aa13.03□□□□□ -0.32
PDK1-209ENST00000466437 RTEL1-TNFRSF6BF6WH68 1400 aa13.03□□□□□ -0.32
PDK1-209ENST00000466437 MIA2Q96PC5 1412 aa13.03□□□□□ -0.32
PDK1-209ENST00000466437 NLRP1Q9C000 1473 aa13.03□□□□□ -0.32
PDK1-209ENST00000466437 FAM135AQ9P2D6 1515 aa13.03□□□□□ -0.32
PDK1-209ENST00000466437 GABBR2O75899 941 aa13.02□□□□□ -0.33
PDK1-209ENST00000466437 PRR29P0C7W0 189 aa13.02□□□□□ -0.33
PDK1-209ENST00000466437 MTUS2Q5JR59 1369 aa13.02□□□□□ -0.33
PDK1-209ENST00000466437 ZC3H13Q5T200 1668 aaKnown RBP13.02□□□□□ -0.33
PDK1-209ENST00000466437 THEMISQ8N1K5 641 aaPredicted RBP13□□□□□ -0.33
PDK1-209ENST00000466437 XIRP1Q702N8 1843 aaKnown RBP12.99□□□□□ -0.33
PDK1-209ENST00000466437 EHBP1L1Q8N3D4 1523 aa12.98□□□□□ -0.33
PDK1-209ENST00000466437 CCDC141Q6ZP82 1450 aa12.98□□□□□ -0.33
PDK1-209ENST00000466437 WASHC2CQ9Y4E1 1318 aa12.98□□□□□ -0.33
PDK1-209ENST00000466437 CAMSAP2Q08AD1 1489 aa12.97□□□□□ -0.33
PDK1-209ENST00000466437 ABCC3O15438 1527 aa12.97□□□□□ -0.33
PDK1-209ENST00000466437 SETD1AO15047 1707 aaKnown RBP12.96□□□□□ -0.33
PDK1-209ENST00000466437 ERVK-7P63135 1459 aa12.96□□□□□ -0.34
PDK1-209ENST00000466437 UBR1Q8IWV7 1749 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms