RNA–Protein interactions for RNA: ENST00000466407.1

ATP2B4-206, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 3

Gene ATP2B4, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-206ENST00000466407 VWDEQ8N2E2 1590 aa10.01□□□□□ -0.81
ATP2B4-206ENST00000466407 TET3O43151 1660 aa10□□□□□ -0.81
ATP2B4-206ENST00000466407 LMTK2Q8IWU2 1503 aa10□□□□□ -0.81
ATP2B4-206ENST00000466407 ITGAEP38570 1179 aa9.99□□□□□ -0.81
ATP2B4-206ENST00000466407 AFAP1Q8N556 730 aa9.99□□□□□ -0.81
ATP2B4-206ENST00000466407 KANK1Q14678 1352 aa9.99□□□□□ -0.81
ATP2B4-206ENST00000466407 RPRD2Q5VT52 1461 aaKnown RBP9.98□□□□□ -0.81
ATP2B4-206ENST00000466407 MROH2AA6NES4 1674 aa9.97□□□□□ -0.81
ATP2B4-206ENST00000466407 CHIC2Q9UKJ5 165 aa9.97□□□□□ -0.81
ATP2B4-206ENST00000466407 ZEB1P37275 1124 aaPredicted RBP9.96□□□□□ -0.82
ATP2B4-206ENST00000466407 MROH1Q8NDA8 1641 aa9.96□□□□□ -0.82
ATP2B4-206ENST00000466407 RRP7BPQ9NSQ0 103 aa9.95□□□□□ -0.82
ATP2B4-206ENST00000466407 COL17A1Q9UMD9 1497 aaPredicted RBP9.95□□□□□ -0.82
ATP2B4-206ENST00000466407 NEURL4Q96JN8 1562 aa9.94□□□□□ -0.82
ATP2B4-206ENST00000466407 CNTLNQ9NXG0 1405 aa9.94□□□□□ -0.82
ATP2B4-206ENST00000466407 DHX57Q6P158 1386 aaKnown RBP9.94□□□□□ -0.82
ATP2B4-206ENST00000466407 RAPGEF3O95398 923 aa9.94□□□□□ -0.82
ATP2B4-206ENST00000466407 MYT1LQ9UL68 1186 aa9.94□□□□□ -0.82
ATP2B4-206ENST00000466407 EFCAB6Q5THR3 1501 aa9.93□□□□□ -0.82
ATP2B4-206ENST00000466407 ARHGAP31Q2M1Z3 1444 aa9.93□□□□□ -0.82
ATP2B4-206ENST00000466407 TIMELESSQ9UNS1 1208 aa9.93□□□□□ -0.82
ATP2B4-206ENST00000466407 SPHKAPQ2M3C7 1700 aa9.93□□□□□ -0.82
ATP2B4-206ENST00000466407 PZPP20742 1482 aa9.92□□□□□ -0.82
ATP2B4-206ENST00000466407 YEATS2Q9ULM3 1422 aa9.92□□□□□ -0.82
ATP2B4-206ENST00000466407 CAMSAP1Q5T5Y3 1602 aa9.92□□□□□ -0.82
ATP2B4-206ENST00000466407 NUP155O75694 1391 aa9.91□□□□□ -0.82
ATP2B4-206ENST00000466407 CEP152O94986 1710 aa9.91□□□□□ -0.82
ATP2B4-206ENST00000466407 ABCC3O15438 1527 aa9.9□□□□□ -0.82
ATP2B4-206ENST00000466407 E9PCH4 1651 aa9.9□□□□□ -0.83
ATP2B4-206ENST00000466407 KDM5AP29375 1690 aaKnown RBP9.9□□□□□ -0.83
ATP2B4-206ENST00000466407 SETD1BQ9UPS6 1966 aaKnown RBP9.89□□□□□ -0.83
ATP2B4-206ENST00000466407 FER1L4A9Z1Z3 1794 aa9.88□□□□□ -0.83
ATP2B4-206ENST00000466407 TRPM2O94759 1503 aa9.88□□□□□ -0.83
ATP2B4-206ENST00000466407 KIF3BO15066 747 aa9.88□□□□□ -0.83
ATP2B4-206ENST00000466407 CCER1Q8TC90 406 aaPredicted RBP9.88□□□□□ -0.83
ATP2B4-206ENST00000466407 TRIM52Q96A61 297 aa9.88□□□□□ -0.83
ATP2B4-206ENST00000466407 MPHOSPH9Q99550 1183 aa9.88□□□□□ -0.83
ATP2B4-206ENST00000466407 SLC4A1APQ9BWU0 796 aaKnown RBP9.88□□□□□ -0.83
ATP2B4-206ENST00000466407 KIF1BO60333 1816 aa9.87□□□□□ -0.83
ATP2B4-206ENST00000466407 STAC3Q96MF2 364 aa9.87□□□□□ -0.83
ATP2B4-206ENST00000466407 PTPRTO14522 1441 aa9.86□□□□□ -0.83
ATP2B4-206ENST00000466407 CLTCQ00610 1675 aaKnown RBP9.85□□□□□ -0.83
ATP2B4-206ENST00000466407 PREX1Q8TCU6 1659 aa9.85□□□□□ -0.83
ATP2B4-206ENST00000466407 ANKRD30BQ9BXX2 1392 aa9.85□□□□□ -0.83
ATP2B4-206ENST00000466407 SIGLEC1Q9BZZ2 1709 aa9.85□□□□□ -0.83
ATP2B4-206ENST00000466407 PIK3C2BO00750 1634 aa9.84□□□□□ -0.83
ATP2B4-206ENST00000466407 SPATA31D1Q6ZQQ2 1576 aa9.84□□□□□ -0.83
ATP2B4-206ENST00000466407 ADAMTSL3P82987 1691 aa9.83□□□□□ -0.84
ATP2B4-206ENST00000466407 WASHC2CQ9Y4E1 1318 aa9.83□□□□□ -0.84
ATP2B4-206ENST00000466407 CCDC144AA2RUR9 1427 aa9.83□□□□□ -0.84
ATP2B4-206ENST00000466407 NOS1P29475 1434 aa9.82□□□□□ -0.84
ATP2B4-206ENST00000466407 ESF1Q9H501 851 aaKnown RBP9.82□□□□□ -0.84
ATP2B4-206ENST00000466407 NPATQ14207 1427 aa9.82□□□□□ -0.84
ATP2B4-206ENST00000466407 PKD2Q13563 968 aa9.81□□□□□ -0.84
ATP2B4-206ENST00000466407 CFAP65Q6ZU64 1925 aaKnown RBP9.81□□□□□ -0.84
ATP2B4-206ENST00000466407 SLC52A1Q9NWF4 448 aa9.8□□□□□ -0.84
ATP2B4-206ENST00000466407 C3P01024 1663 aa9.8□□□□□ -0.84
ATP2B4-206ENST00000466407 NLRP1Q9C000 1473 aa9.79□□□□□ -0.84
ATP2B4-206ENST00000466407 GGT6Q6P531 493 aa9.79□□□□□ -0.84
ATP2B4-206ENST00000466407 ERVK-7P63135 1459 aa9.79□□□□□ -0.84
ATP2B4-206ENST00000466407 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.78□□□□□ -0.84
ATP2B4-206ENST00000466407 CLTCL1P53675 1640 aa9.78□□□□□ -0.84
ATP2B4-206ENST00000466407 ADGRB3O60242 1522 aa9.77□□□□□ -0.84
ATP2B4-206ENST00000466407 TONSLQ96HA7 1378 aa9.77□□□□□ -0.84
ATP2B4-206ENST00000466407 IFT172Q9UG01 1749 aa9.77□□□□□ -0.85
ATP2B4-206ENST00000466407 KIAA1210Q9ULL0 1709 aa9.77□□□□□ -0.85
ATP2B4-206ENST00000466407 ARID4BQ4LE39 1312 aaPredicted RBP9.77□□□□□ -0.85
ATP2B4-206ENST00000466407 ZNF142P52746 1687 aaPredicted RBP9.77□□□□□ -0.85
ATP2B4-206ENST00000466407 SYNMO15061 1565 aa9.76□□□□□ -0.85
ATP2B4-206ENST00000466407 MADDQ8WXG6 1647 aa9.76□□□□□ -0.85
ATP2B4-206ENST00000466407 PLA2R1Q13018 1463 aa9.76□□□□□ -0.85
ATP2B4-206ENST00000466407 RIMS1Q86UR5 1692 aaKnown RBP9.76□□□□□ -0.85
ATP2B4-206ENST00000466407 ZMYM3Q14202 1370 aa9.75□□□□□ -0.85
ATP2B4-206ENST00000466407 LAMC1P11047 1609 aa9.75□□□□□ -0.85
ATP2B4-206ENST00000466407 KDM4FA0A1W2PPD8 638 aa9.75□□□□□ -0.85
ATP2B4-206ENST00000466407 RPGRIP1LQ68CZ1 1315 aa9.75□□□□□ -0.85
ATP2B4-206ENST00000466407 PPLO60437 1756 aa9.75□□□□□ -0.85
ATP2B4-206ENST00000466407 MYOM2P54296 1465 aa9.74□□□□□ -0.85
ATP2B4-206ENST00000466407 SPATA31E1Q6ZUB1 1445 aa9.73□□□□□ -0.85
ATP2B4-206ENST00000466407 TMEM131LA2VDJ0 1609 aa9.73□□□□□ -0.85
ATP2B4-206ENST00000466407 ZFYVE9O95405 1425 aa9.73□□□□□ -0.85
ATP2B4-206ENST00000466407 UHRF1BP1Q6BDS2 1440 aa9.73□□□□□ -0.85
ATP2B4-206ENST00000466407 UGGT1Q9NYU2 1555 aa9.71□□□□□ -0.85
ATP2B4-206ENST00000466407 MYO3AQ8NEV4 1616 aa9.71□□□□□ -0.85
ATP2B4-206ENST00000466407 UBR1Q8IWV7 1749 aa9.71□□□□□ -0.85
ATP2B4-206ENST00000466407 MYO5BQ9ULV0 1848 aa9.71□□□□□ -0.85
ATP2B4-206ENST00000466407 ILDR1Q86SU0 546 aaPredicted RBP9.71□□□□□ -0.86
ATP2B4-206ENST00000466407 TNRQ92752 1358 aa9.71□□□□□ -0.86
ATP2B4-206ENST00000466407 HDGFP51858 240 aaKnown RBP9.7□□□□□ -0.86
ATP2B4-206ENST00000466407 A2ML1A8K2U0 1454 aa9.69□□□□□ -0.86
ATP2B4-206ENST00000466407 CEP170BQ9Y4F5 1589 aaPredicted RBP9.68□□□□□ -0.86
ATP2B4-206ENST00000466407 NRXN1Q9ULB1 1477 aa9.68□□□□□ -0.86
ATP2B4-206ENST00000466407 TRPM1Q7Z4N2 1603 aa9.67□□□□□ -0.86
ATP2B4-206ENST00000466407 SETBP1Q9Y6X0 1596 aa9.67□□□□□ -0.86
ATP2B4-206ENST00000466407 SLIT1O75093 1534 aa9.67□□□□□ -0.86
ATP2B4-206ENST00000466407 NEXMIFQ5QGS0 1516 aa9.67□□□□□ -0.86
ATP2B4-206ENST00000466407 PTPRMP28827 1452 aa9.67□□□□□ -0.86
ATP2B4-206ENST00000466407 RALGAPBQ86X10 1494 aa9.67□□□□□ -0.86
ATP2B4-206ENST00000466407 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.67□□□□□ -0.86
ATP2B4-206ENST00000466407 SLC24A1O60721 1099 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms