RNA–Protein interactions for RNA: ENST00000466175.5

LETM1-202, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 2

Gene LETM1, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-202ENST00000466175 ZMYM4Q5VZL5 1548 aa25.77■■□□□ 1.72
LETM1-202ENST00000466175 MYT1LQ9UL68 1186 aa25.77■■□□□ 1.72
LETM1-202ENST00000466175 YEATS2Q9ULM3 1422 aa25.76■■□□□ 1.71
LETM1-202ENST00000466175 UNC13BO14795 1591 aa25.75■■□□□ 1.71
LETM1-202ENST00000466175 KDM5CP41229 1560 aa25.74■■□□□ 1.71
LETM1-202ENST00000466175 ZFYVE16Q7Z3T8 1539 aa25.73■■□□□ 1.71
LETM1-202ENST00000466175 DUOX2Q9NRD8 1548 aa25.73■■□□□ 1.71
LETM1-202ENST00000466175 ARHGEF40Q8TER5 1519 aa25.73■■□□□ 1.71
LETM1-202ENST00000466175 HSPA5P11021 654 aaKnown RBP25.71■■□□□ 1.71
LETM1-202ENST00000466175 HIRIP3Q9BW71 556 aaPredicted RBP25.71■■□□□ 1.71
LETM1-202ENST00000466175 FAM135AQ9P2D6 1515 aa25.7■■□□□ 1.7
LETM1-202ENST00000466175 HECW2Q9P2P5 1572 aa25.7■■□□□ 1.7
LETM1-202ENST00000466175 ERBINQ96RT1 1412 aa25.69■■□□□ 1.7
LETM1-202ENST00000466175 MAGI2Q86UL8 1455 aa25.68■■□□□ 1.7
LETM1-202ENST00000466175 ANP32CO43423 234 aa25.68■■□□□ 1.7
LETM1-202ENST00000466175 CCER2I3L3R5 266 aa25.67■■□□□ 1.7
LETM1-202ENST00000466175 RTEL1-TNFRSF6BF6WH68 1400 aa25.66■■□□□ 1.7
LETM1-202ENST00000466175 KIDINS220Q9ULH0 1771 aa25.65■■□□□ 1.7
LETM1-202ENST00000466175 NBPF8Q3BBV2 869 aa25.65■■□□□ 1.7
LETM1-202ENST00000466175 GTF3C3Q9Y5Q9 886 aa25.65■■□□□ 1.7
LETM1-202ENST00000466175 SPAG9O60271 1321 aaKnown RBP25.65■■□□□ 1.7
LETM1-202ENST00000466175 IQGAP3Q86VI3 1631 aa25.65■■□□□ 1.7
LETM1-202ENST00000466175 SIGLEC1Q9BZZ2 1709 aa25.64■■□□□ 1.7
LETM1-202ENST00000466175 ARID4BQ4LE39 1312 aaPredicted RBP25.64■■□□□ 1.7
LETM1-202ENST00000466175 UHRF1BP1Q6BDS2 1440 aa25.64■■□□□ 1.69
LETM1-202ENST00000466175 MLH3Q9UHC1 1453 aa25.64■■□□□ 1.69
LETM1-202ENST00000466175 ABCA6Q8N139 1617 aa25.63■■□□□ 1.69
LETM1-202ENST00000466175 DIP2CQ9Y2E4 1556 aa25.61■■□□□ 1.69
LETM1-202ENST00000466175 POLR1AO95602 1720 aaPredicted RBP25.6■■□□□ 1.69
LETM1-202ENST00000466175 KDM4FA0A1W2PPD8 638 aa25.6■■□□□ 1.69
LETM1-202ENST00000466175 ATP10AO60312 1499 aa25.6■■□□□ 1.69
LETM1-202ENST00000466175 SPATA31E1Q6ZUB1 1445 aa25.6■■□□□ 1.69
LETM1-202ENST00000466175 ATP7AQ04656 1500 aa25.59■■□□□ 1.69
LETM1-202ENST00000466175 INO80Q9ULG1 1556 aaPredicted RBP25.58■■□□□ 1.69
LETM1-202ENST00000466175 WASHC2AQ641Q2 1341 aa25.57■■□□□ 1.68
LETM1-202ENST00000466175 RALGAPBQ86X10 1494 aa25.54■■□□□ 1.68
LETM1-202ENST00000466175 MLECQ14165 292 aa25.53■■□□□ 1.68
LETM1-202ENST00000466175 CCDC7Q96M83 1385 aa25.52■■□□□ 1.68
LETM1-202ENST00000466175 CCDC144AA2RUR9 1427 aa25.51■■□□□ 1.67
LETM1-202ENST00000466175 CNTLNQ9NXG0 1405 aa25.5■■□□□ 1.67
LETM1-202ENST00000466175 BCORL1Q5H9F3 1711 aa25.5■■□□□ 1.67
LETM1-202ENST00000466175 AEBP2Q6ZN18 517 aaPredicted RBP25.45■■□□□ 1.67
LETM1-202ENST00000466175 REREQ9P2R6 1566 aa25.45■■□□□ 1.66
LETM1-202ENST00000466175 A2MP01023 1474 aa25.45■■□□□ 1.66
LETM1-202ENST00000466175 ADAMTSL3P82987 1691 aa25.44■■□□□ 1.66
LETM1-202ENST00000466175 USP47Q96K76 1375 aa25.44■■□□□ 1.66
LETM1-202ENST00000466175 DEPDC5O75140 1603 aa25.44■■□□□ 1.66
LETM1-202ENST00000466175 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.44■■□□□ 1.662e-8■■■□□ 14.9
LETM1-202ENST00000466175 PLA2R1Q13018 1463 aa25.43■■□□□ 1.66
LETM1-202ENST00000466175 MADDQ8WXG6 1647 aa25.43■■□□□ 1.66
LETM1-202ENST00000466175 EIF2AK4Q9P2K8 1649 aaKnown RBP25.43■■□□□ 1.66
LETM1-202ENST00000466175 AGLP35573 1532 aa25.39■■□□□ 1.65
LETM1-202ENST00000466175 KIF7Q2M1P5 1343 aa25.38■■□□□ 1.65
LETM1-202ENST00000466175 ZNF326Q5BKZ1 582 aaKnown RBP25.38■■□□□ 1.65
LETM1-202ENST00000466175 C11orf95C9JLR9 678 aaPredicted RBP25.37■■□□□ 1.65
LETM1-202ENST00000466175 DCAF11Q8TEB1 546 aa25.37■■□□□ 1.65
LETM1-202ENST00000466175 RIMS1Q86UR5 1692 aaKnown RBP25.37■■□□□ 1.65
LETM1-202ENST00000466175 FER1L4A9Z1Z3 1794 aa25.37■■□□□ 1.65
LETM1-202ENST00000466175 PLPPR3Q6T4P5 718 aa25.36■■□□□ 1.65
LETM1-202ENST00000466175 KANK1Q14678 1352 aa25.36■■□□□ 1.65
LETM1-202ENST00000466175 DHX29Q7Z478 1369 aaKnown RBP25.36■■□□□ 1.65
LETM1-202ENST00000466175 PRAG1Q86YV5 1406 aa25.34■■□□□ 1.65
LETM1-202ENST00000466175 CARD11Q9BXL7 1154 aa25.34■■□□□ 1.65
LETM1-202ENST00000466175 TET3O43151 1660 aa25.34■■□□□ 1.65
LETM1-202ENST00000466175 TRPM1Q7Z4N2 1603 aa25.34■■□□□ 1.65
LETM1-202ENST00000466175 LAMC1P11047 1609 aa25.33■■□□□ 1.65
LETM1-202ENST00000466175 VWDEQ8N2E2 1590 aa25.33■■□□□ 1.65
LETM1-202ENST00000466175 ROCK2O75116 1388 aaKnown RBP25.33■■□□□ 1.64
LETM1-202ENST00000466175 GGT6Q6P531 493 aa25.32■■□□□ 1.64
LETM1-202ENST00000466175 E9PCH4 1651 aa25.32■■□□□ 1.64
LETM1-202ENST00000466175 KIF3BO15066 747 aa25.31■■□□□ 1.64
LETM1-202ENST00000466175 KDM2AQ9Y2K7 1162 aa25.3■■□□□ 1.64
LETM1-202ENST00000466175 TRPM2O94759 1503 aa25.3■■□□□ 1.64
LETM1-202ENST00000466175 PTPRMP28827 1452 aa25.3■■□□□ 1.64
LETM1-202ENST00000466175 PRDM15P57071 1507 aaPredicted RBP25.29■■□□□ 1.64
LETM1-202ENST00000466175 STAC3Q96MF2 364 aa25.29■■□□□ 1.64
LETM1-202ENST00000466175 PTPRTO14522 1441 aa25.28■■□□□ 1.64
LETM1-202ENST00000466175 GPRASP1Q5JY77 1395 aa25.28■■□□□ 1.64
LETM1-202ENST00000466175 SPHKAPQ2M3C7 1700 aa25.27■■□□□ 1.64
LETM1-202ENST00000466175 ESF1Q9H501 851 aaKnown RBP25.25■■□□□ 1.63
LETM1-202ENST00000466175 NEURL4Q96JN8 1562 aa25.25■■□□□ 1.63
LETM1-202ENST00000466175 CEP152O94986 1710 aa25.24■■□□□ 1.63
LETM1-202ENST00000466175 PRKRIP1Q9H875 184 aaPredicted RBP25.24■■□□□ 1.63
LETM1-202ENST00000466175 CEBPAP49715 358 aaPredicted RBP25.23■■□□□ 1.63
LETM1-202ENST00000466175 CLTCQ00610 1675 aaKnown RBP25.21■■□□□ 1.63
LETM1-202ENST00000466175 RGL3Q3MIN7 710 aa25.21■■□□□ 1.63
LETM1-202ENST00000466175 MROH1Q8NDA8 1641 aa25.2■■□□□ 1.63
LETM1-202ENST00000466175 RNF17Q9BXT8 1623 aaKnown RBP25.2■■□□□ 1.62
LETM1-202ENST00000466175 LMTK2Q8IWU2 1503 aa25.19■■□□□ 1.62
LETM1-202ENST00000466175 ST20-MTHFSA0A0A6YYL1 179 aa25.16■■□□□ 1.62
LETM1-202ENST00000466175 C3P01024 1663 aa25.16■■□□□ 1.62
LETM1-202ENST00000466175 CLTCL1P53675 1640 aa25.15■■□□□ 1.62
LETM1-202ENST00000466175 EFCAB6Q5THR3 1501 aa25.14■■□□□ 1.61
LETM1-202ENST00000466175 WASHC2CQ9Y4E1 1318 aa25.13■■□□□ 1.61
LETM1-202ENST00000466175 ZMYM3Q14202 1370 aa25.12■■□□□ 1.61
LETM1-202ENST00000466175 MROH2AA6NES4 1674 aa25.1■■□□□ 1.61
LETM1-202ENST00000466175 KTN1Q86UP2 1357 aaKnown RBP25.1■■□□□ 1.61
LETM1-202ENST00000466175 PPP6R1Q9UPN7 881 aa25.09■■□□□ 1.61
LETM1-202ENST00000466175 KIAA1210Q9ULL0 1709 aa25.06■■□□□ 1.6
LETM1-202ENST00000466175 NBPF1Q3BBV0 1214 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms