RNA–Protein interactions for RNA: ENST00000466138.1

CSF3R-208, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 3

Gene CSF3R, Length 335 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-208ENST00000466138 ITSN2Q9NZM3 1697 aa17.9■□□□□ 0.46
CSF3R-208ENST00000466138 PHLPP1O60346 1717 aa17.89■□□□□ 0.45
CSF3R-208ENST00000466138 THEMISQ8N1K5 641 aaPredicted RBP17.88■□□□□ 0.45
CSF3R-208ENST00000466138 MYO5CQ9NQX4 1742 aa17.88■□□□□ 0.45
CSF3R-208ENST00000466138 MED14O60244 1454 aa17.88■□□□□ 0.45
CSF3R-208ENST00000466138 XIRP1Q702N8 1843 aaKnown RBP17.86■□□□□ 0.45
CSF3R-208ENST00000466138 ATAD2Q6PL18 1390 aa17.86■□□□□ 0.45
CSF3R-208ENST00000466138 TNRQ92752 1358 aa17.86■□□□□ 0.45
CSF3R-208ENST00000466138 AFF2P51816 1311 aa17.85■□□□□ 0.45
CSF3R-208ENST00000466138 SPATA31A6Q5VVP1 1343 aa17.84■□□□□ 0.45
CSF3R-208ENST00000466138 KIDINS220Q9ULH0 1771 aa17.83■□□□□ 0.44
CSF3R-208ENST00000466138 DEPDC5O75140 1603 aa17.81■□□□□ 0.44
CSF3R-208ENST00000466138 QTRT2Q9H974 415 aaKnown RBP17.81■□□□□ 0.44
CSF3R-208ENST00000466138 RBM6P78332 1123 aaKnown RBP17.8■□□□□ 0.44
CSF3R-208ENST00000466138 FAM135AQ9P2D6 1515 aa17.79■□□□□ 0.44
CSF3R-208ENST00000466138 CHIC1Q5VXU3 224 aa17.79■□□□□ 0.44
CSF3R-208ENST00000466138 LRP5O75197 1615 aa17.79■□□□□ 0.44
CSF3R-208ENST00000466138 TMEM94Q12767 1356 aa17.79■□□□□ 0.44
CSF3R-208ENST00000466138 SAMD9Q5K651 1589 aa17.78■□□□□ 0.44
CSF3R-208ENST00000466138 ATP1B4Q9UN42 357 aaPredicted RBP17.77■□□□□ 0.44
CSF3R-208ENST00000466138 UGGT1Q9NYU2 1555 aa17.77■□□□□ 0.44
CSF3R-208ENST00000466138 PSDA5PKW4 1024 aaPredicted RBP17.75■□□□□ 0.43
CSF3R-208ENST00000466138 KIF14Q15058 1648 aa17.74■□□□□ 0.43
CSF3R-208ENST00000466138 COL16A1Q07092 1604 aaPredicted RBP17.73■□□□□ 0.43
CSF3R-208ENST00000466138 C8orf37Q96NL8 207 aa17.73■□□□□ 0.43
CSF3R-208ENST00000466138 SLAIN2Q9P270 581 aa17.72■□□□□ 0.43
CSF3R-208ENST00000466138 LRRC9Q6ZRR7 1453 aa17.7■□□□□ 0.42
CSF3R-208ENST00000466138 PROSER2Q86WR7 435 aaPredicted RBP17.7■□□□□ 0.42
CSF3R-208ENST00000466138 KDM5DQ9BY66 1539 aa17.69■□□□□ 0.42
CSF3R-208ENST00000466138 ZC3H13Q5T200 1668 aaKnown RBP17.69■□□□□ 0.42
CSF3R-208ENST00000466138 SPAG9O60271 1321 aaKnown RBP17.68■□□□□ 0.42
CSF3R-208ENST00000466138 DEFB132Q7Z7B7 95 aa17.67■□□□□ 0.42
CSF3R-208ENST00000466138 NGLY1Q96IV0 654 aa17.67■□□□□ 0.42
CSF3R-208ENST00000466138 FGD6Q6ZV73 1430 aa17.66■□□□□ 0.42
CSF3R-208ENST00000466138 A2MP01023 1474 aa17.65■□□□□ 0.42
CSF3R-208ENST00000466138 EHMT2Q96KQ7 1210 aa17.65■□□□□ 0.42
CSF3R-208ENST00000466138 ZNF777Q9ULD5 760 aaPredicted RBP17.65■□□□□ 0.42
CSF3R-208ENST00000466138 MIA2Q96PC5 1412 aa17.64■□□□□ 0.42
CSF3R-208ENST00000466138 MAP3K1Q13233 1512 aa17.64■□□□□ 0.41
CSF3R-208ENST00000466138 HRCP23327 699 aa17.64■□□□□ 0.41
CSF3R-208ENST00000466138 CCDC125Q86Z20 511 aa17.64■□□□□ 0.41
CSF3R-208ENST00000466138 SAMD9LQ8IVG5 1584 aa17.63■□□□□ 0.41
CSF3R-208ENST00000466138 ATP7AQ04656 1500 aa17.62■□□□□ 0.41
CSF3R-208ENST00000466138 CDC42BPBQ9Y5S2 1711 aa17.62■□□□□ 0.41
CSF3R-208ENST00000466138 NLRP1Q9C000 1473 aa17.62■□□□□ 0.41
CSF3R-208ENST00000466138 MSH6P52701 1360 aa17.61■□□□□ 0.41
CSF3R-208ENST00000466138 LTKP29376 864 aa17.6■□□□□ 0.41
CSF3R-208ENST00000466138 TXNDC2Q86VQ3 553 aa17.6■□□□□ 0.41
CSF3R-208ENST00000466138 PRXQ9BXM0 1461 aa17.6■□□□□ 0.41
CSF3R-208ENST00000466138 SHPRHQ149N8 1683 aa17.6■□□□□ 0.41
CSF3R-208ENST00000466138 PLXNC1O60486 1568 aa17.59■□□□□ 0.41
CSF3R-208ENST00000466138 PZPP20742 1482 aa17.59■□□□□ 0.41
CSF3R-208ENST00000466138 HNRNPMP52272 730 aaKnown RBP eCLIP17.59■□□□□ 0.41
CSF3R-208ENST00000466138 SCAF11Q99590 1463 aaKnown RBP17.57■□□□□ 0.4
CSF3R-208ENST00000466138 CDK11AQ9UQ88 783 aaPredicted RBP17.56■□□□□ 0.4
CSF3R-208ENST00000466138 EP400Q96L91 3159 aa17.54■□□□□ 0.4
CSF3R-208ENST00000466138 NHSL1Q5SYE7 1610 aa17.54■□□□□ 0.4
CSF3R-208ENST00000466138 C1QTNF8P60827 252 aa17.54■□□□□ 0.4
CSF3R-208ENST00000466138 WASHC2CQ9Y4E1 1318 aa17.53■□□□□ 0.4
CSF3R-208ENST00000466138 ADAMTS2O95450 1211 aa17.53■□□□□ 0.4
CSF3R-208ENST00000466138 KCNA6P17658 529 aa17.53■□□□□ 0.4
CSF3R-208ENST00000466138 NWD1Q149M9 1564 aa17.53■□□□□ 0.4
CSF3R-208ENST00000466138 ZNF784Q8NCA9 323 aaPredicted RBP17.51■□□□□ 0.39
CSF3R-208ENST00000466138 CLIP1P30622 1438 aa17.5■□□□□ 0.39
CSF3R-208ENST00000466138 TROQ12816 1431 aaPredicted RBP17.5■□□□□ 0.39
CSF3R-208ENST00000466138 SF3B2Q13435 895 aaKnown RBP17.5■□□□□ 0.39
CSF3R-208ENST00000466138 SLC26A8Q96RN1 970 aa17.5■□□□□ 0.39
CSF3R-208ENST00000466138 SYCP2Q9BX26 1530 aa17.5■□□□□ 0.39
CSF3R-208ENST00000466138 TIAM1Q13009 1591 aa17.49■□□□□ 0.39
CSF3R-208ENST00000466138 USP21Q9UK80 565 aa17.49■□□□□ 0.39
CSF3R-208ENST00000466138 PREX2Q70Z35 1606 aa17.49■□□□□ 0.39
CSF3R-208ENST00000466138 BLMP54132 1417 aaPredicted RBP17.48■□□□□ 0.39
CSF3R-208ENST00000466138 KIF3BO15066 747 aa17.48■□□□□ 0.39
CSF3R-208ENST00000466138 PRDM15P57071 1507 aaPredicted RBP17.47■□□□□ 0.39
CSF3R-208ENST00000466138 EID1Q9Y6B2 187 aa17.47■□□□□ 0.39
CSF3R-208ENST00000466138 C14orf37Q86TY3 774 aa17.46■□□□□ 0.39
CSF3R-208ENST00000466138 TRPC5Q9UL62 973 aaPredicted RBP17.46■□□□□ 0.39
CSF3R-208ENST00000466138 NCOA2Q15596 1464 aa17.45■□□□□ 0.38
CSF3R-208ENST00000466138 AHDC1Q5TGY3 1603 aaPredicted RBP17.45■□□□□ 0.38
CSF3R-208ENST00000466138 DIP2AQ14689 1571 aa17.45■□□□□ 0.38
CSF3R-208ENST00000466138 DCAF8L1A6NGE4 600 aa17.44■□□□□ 0.38
CSF3R-208ENST00000466138 R3HDM1Q15032 1099 aaKnown RBP17.44■□□□□ 0.38
CSF3R-208ENST00000466138 ADGBQ8N7X0 1667 aa17.44■□□□□ 0.38
CSF3R-208ENST00000466138 BCL9LQ86UU0 1499 aa17.44■□□□□ 0.38
CSF3R-208ENST00000466138 INO80Q9ULG1 1556 aaPredicted RBP17.42■□□□□ 0.38
CSF3R-208ENST00000466138 BCANQ96GW7 911 aa17.39■□□□□ 0.37
CSF3R-208ENST00000466138 KDM5AP29375 1690 aaKnown RBP17.39■□□□□ 0.37
CSF3R-208ENST00000466138 UBR1Q8IWV7 1749 aa17.38■□□□□ 0.37
CSF3R-208ENST00000466138 CAPN15O75808 1086 aa17.37■□□□□ 0.37
CSF3R-208ENST00000466138 BRINP3Q76B58 766 aa17.37■□□□□ 0.37
CSF3R-208ENST00000466138 DDX17Q92841 729 aaKnown RBP17.35■□□□□ 0.37
CSF3R-208ENST00000466138 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.35■□□□□ 0.37
CSF3R-208ENST00000466138 NKTRP30414 1462 aaKnown RBP17.35■□□□□ 0.37
CSF3R-208ENST00000466138 ARHGAP23Q9P227 1491 aa17.35■□□□□ 0.37
CSF3R-208ENST00000466138 ABCC3O15438 1527 aa17.35■□□□□ 0.37
CSF3R-208ENST00000466138 ATF3P18847 181 aa17.34■□□□□ 0.37
CSF3R-208ENST00000466138 MAST1Q9Y2H9 1570 aa17.33■□□□□ 0.37
CSF3R-208ENST00000466138 ATRNO75882 1429 aa17.33■□□□□ 0.36
CSF3R-208ENST00000466138 CDC42BPAQ5VT25 1732 aa17.33■□□□□ 0.36
CSF3R-208ENST00000466138 SLIT1O75093 1534 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms