RNA–Protein interactions for RNA: ENST00000466073.5

TFAP2A-208, Transcript of transcription factor AP-2 alpha, humanhuman

TSL 1 (best)

Gene TFAP2A, Length 987 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-208ENST00000466073 RNF17Q9BXT8 1623 aaKnown RBP24.45■■□□□ 1.5
TFAP2A-208ENST00000466073 EIF2AK4Q9P2K8 1649 aaKnown RBP24.45■■□□□ 1.5
TFAP2A-208ENST00000466073 PZPP20742 1482 aa24.45■■□□□ 1.5
TFAP2A-208ENST00000466073 KIF3BO15066 747 aa24.44■■□□□ 1.5
TFAP2A-208ENST00000466073 ZC3H13Q5T200 1668 aaKnown RBP24.43■■□□□ 1.5
TFAP2A-208ENST00000466073 TSPY4P0CV99 314 aa24.43■■□□□ 1.5
TFAP2A-208ENST00000466073 TSPY10P0CW01 314 aa24.43■■□□□ 1.5
TFAP2A-208ENST00000466073 A2ML1A8K2U0 1454 aa24.43■■□□□ 1.5
TFAP2A-208ENST00000466073 TCOF1Q13428 1488 aaKnown RBP24.41■■□□□ 1.5
TFAP2A-208ENST00000466073 LTBP4Q8N2S1 1624 aa24.41■■□□□ 1.5
TFAP2A-208ENST00000466073 CROCC2H7BZ55 1655 aa24.4■■□□□ 1.5
TFAP2A-208ENST00000466073 DNMT1P26358 1616 aaKnown RBP24.39■■□□□ 1.5
TFAP2A-208ENST00000466073 IQSEC2Q5JU85 1478 aa24.39■■□□□ 1.5
TFAP2A-208ENST00000466073 KANK4Q5T7N3 995 aaPredicted RBP24.39■■□□□ 1.49
TFAP2A-208ENST00000466073 TNRQ92752 1358 aa24.38■■□□□ 1.49
TFAP2A-208ENST00000466073 POLR1AO95602 1720 aaPredicted RBP24.38■■□□□ 1.49
TFAP2A-208ENST00000466073 PKD2Q13563 968 aa24.36■■□□□ 1.49
TFAP2A-208ENST00000466073 SHANK2Q9UPX8 1470 aa24.36■■□□□ 1.49
TFAP2A-208ENST00000466073 WASHC2CQ9Y4E1 1318 aa24.35■■□□□ 1.49
TFAP2A-208ENST00000466073 PTPN23Q9H3S7 1636 aa24.35■■□□□ 1.49
TFAP2A-208ENST00000466073 APLP2Q06481 763 aa24.34■■□□□ 1.49
TFAP2A-208ENST00000466073 ABCC3O15438 1527 aa24.34■■□□□ 1.49
TFAP2A-208ENST00000466073 DUOX2Q9NRD8 1548 aa24.33■■□□□ 1.49
TFAP2A-208ENST00000466073 NCKAP5LQ9HCH0 1330 aa24.33■■□□□ 1.48
TFAP2A-208ENST00000466073 NLRP1Q9C000 1473 aa24.32■■□□□ 1.48
TFAP2A-208ENST00000466073 MROH1Q8NDA8 1641 aa24.32■■□□□ 1.48
TFAP2A-208ENST00000466073 CEP152O94986 1710 aa24.29■■□□□ 1.48
TFAP2A-208ENST00000466073 SPATA31D1Q6ZQQ2 1576 aa24.28■■□□□ 1.48
TFAP2A-208ENST00000466073 PRDM15P57071 1507 aaPredicted RBP24.27■■□□□ 1.48
TFAP2A-208ENST00000466073 NEURL4Q96JN8 1562 aa24.27■■□□□ 1.48
TFAP2A-208ENST00000466073 FBXO31Q5XUX0 539 aaPredicted RBP24.26■■□□□ 1.47
TFAP2A-208ENST00000466073 FGD6Q6ZV73 1430 aa24.26■■□□□ 1.47
TFAP2A-208ENST00000466073 ERBINQ96RT1 1412 aa24.26■■□□□ 1.47
TFAP2A-208ENST00000466073 UGGT1Q9NYU2 1555 aa24.25■■□□□ 1.47
TFAP2A-208ENST00000466073 KIF15Q9NS87 1388 aa24.25■■□□□ 1.47
TFAP2A-208ENST00000466073 ZNF335Q9H4Z2 1342 aaPredicted RBP24.24■■□□□ 1.47
TFAP2A-208ENST00000466073 ABCC5O15440 1437 aa24.24■■□□□ 1.47
TFAP2A-208ENST00000466073 DAPK1P53355 1430 aa24.23■■□□□ 1.47
TFAP2A-208ENST00000466073 ERVK-7P63135 1459 aa24.23■■□□□ 1.47
TFAP2A-208ENST00000466073 DEPDC5O75140 1603 aa24.21■■□□□ 1.47
TFAP2A-208ENST00000466073 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.16■■□□□ 1.46
TFAP2A-208ENST00000466073 CPS1P31327 1500 aa24.16■■□□□ 1.46
TFAP2A-208ENST00000466073 THEMISQ8N1K5 641 aaPredicted RBP24.16■■□□□ 1.46
TFAP2A-208ENST00000466073 IQGAP1P46940 1657 aa24.15■■□□□ 1.46
TFAP2A-208ENST00000466073 MED14O60244 1454 aa24.13■■□□□ 1.45
TFAP2A-208ENST00000466073 UBR1Q8IWV7 1749 aa24.13■■□□□ 1.45
TFAP2A-208ENST00000466073 ANKLE2Q86XL3 938 aa24.13■■□□□ 1.45
TFAP2A-208ENST00000466073 NPHP4O75161 1426 aaPredicted RBP24.12■■□□□ 1.45
TFAP2A-208ENST00000466073 ARHGAP31Q2M1Z3 1444 aa24.12■■□□□ 1.45
TFAP2A-208ENST00000466073 ANKRD30AQ9BXX3 1397 aa24.12■■□□□ 1.45
TFAP2A-208ENST00000466073 VWDEQ8N2E2 1590 aa24.11■■□□□ 1.45
TFAP2A-208ENST00000466073 RRP7BPQ9NSQ0 103 aa24.1■■□□□ 1.45
TFAP2A-208ENST00000466073 KANK1Q14678 1352 aa24.1■■□□□ 1.45
TFAP2A-208ENST00000466073 CFAP65Q6ZU64 1925 aaKnown RBP24.09■■□□□ 1.45
TFAP2A-208ENST00000466073 ADGRL2O95490 1459 aa24.08■■□□□ 1.45
TFAP2A-208ENST00000466073 LMTK2Q8IWU2 1503 aa24.07■■□□□ 1.44
TFAP2A-208ENST00000466073 UBAP1LF5GYI3 381 aa24.06■■□□□ 1.44
TFAP2A-208ENST00000466073 SYNMO15061 1565 aa24.05■■□□□ 1.44
TFAP2A-208ENST00000466073 SCAF11Q99590 1463 aaKnown RBP24.03■■□□□ 1.44
TFAP2A-208ENST00000466073 EFCAB6Q5THR3 1501 aa24.03■■□□□ 1.44
TFAP2A-208ENST00000466073 PIK3C2BO00750 1634 aa24.02■■□□□ 1.44
TFAP2A-208ENST00000466073 KDM5AP29375 1690 aaKnown RBP24.02■■□□□ 1.44
TFAP2A-208ENST00000466073 SLIT1O75093 1534 aa24.02■■□□□ 1.44
TFAP2A-208ENST00000466073 DISP3Q9P2K9 1392 aa24.02■■□□□ 1.44
TFAP2A-208ENST00000466073 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.01■■□□□ 1.43
TFAP2A-208ENST00000466073 ARHGAP23Q9P227 1491 aa24■■□□□ 1.43
TFAP2A-208ENST00000466073 CHIC2Q9UKJ5 165 aa24■■□□□ 1.43
TFAP2A-208ENST00000466073 FAM50AQ14320 339 aaKnown RBP23.97■■□□□ 1.43
TFAP2A-208ENST00000466073 STRCP1A6NGW2 1772 aa23.96■■□□□ 1.43
TFAP2A-208ENST00000466073 ANKRD50Q9ULJ7 1429 aa23.94■■□□□ 1.42
TFAP2A-208ENST00000466073 ADGRB3O60242 1522 aa23.94■■□□□ 1.42
TFAP2A-208ENST00000466073 RPRD2Q5VT52 1461 aaKnown RBP23.92■■□□□ 1.42
TFAP2A-208ENST00000466073 TET3O43151 1660 aa23.92■■□□□ 1.42
TFAP2A-208ENST00000466073 UNC13BO14795 1591 aa23.91■■□□□ 1.42
TFAP2A-208ENST00000466073 TOM1O60784 492 aa23.91■■□□□ 1.42
TFAP2A-208ENST00000466073 NOS1P29475 1434 aa23.91■■□□□ 1.42
TFAP2A-208ENST00000466073 TMEM2Q9UHN6 1383 aa23.91■■□□□ 1.42
TFAP2A-208ENST00000466073 SCAF1Q9H7N4 1312 aaKnown RBP23.9■■□□□ 1.42
TFAP2A-208ENST00000466073 LRRC7Q96NW7 1537 aa23.89■■□□□ 1.42
TFAP2A-208ENST00000466073 GCC2Q8IWJ2 1684 aa23.89■■□□□ 1.42
TFAP2A-208ENST00000466073 EID1Q9Y6B2 187 aa23.89■■□□□ 1.41
TFAP2A-208ENST00000466073 STAG3Q9UJ98 1225 aa23.88■■□□□ 1.41
TFAP2A-208ENST00000466073 TXNDC2Q86VQ3 553 aa23.87■■□□□ 1.41
TFAP2A-208ENST00000466073 ALKQ9UM73 1620 aa23.86■■□□□ 1.41
TFAP2A-208ENST00000466073 LTKP29376 864 aa23.85■■□□□ 1.41
TFAP2A-208ENST00000466073 PIP4K2BP78356 416 aa23.85■■□□□ 1.41
TFAP2A-208ENST00000466073 ROCK1Q13464 1354 aa23.84■■□□□ 1.41
TFAP2A-208ENST00000466073 IQGAP3Q86VI3 1631 aa23.81■■□□□ 1.4
TFAP2A-208ENST00000466073 IDI1Q13907 227 aa23.8■■□□□ 1.4
TFAP2A-208ENST00000466073 SLC52A1Q9NWF4 448 aa23.79■■□□□ 1.4
TFAP2A-208ENST00000466073 XIRP1Q702N8 1843 aaKnown RBP23.78■■□□□ 1.4
TFAP2A-208ENST00000466073 HSPA1LP34931 641 aa23.78■■□□□ 1.4
TFAP2A-208ENST00000466073 MED1Q15648 1581 aaPredicted RBP23.78■■□□□ 1.4
TFAP2A-208ENST00000466073 E9PCH4 1651 aa23.77■■□□□ 1.4
TFAP2A-208ENST00000466073 ILDR2Q71H61 639 aa23.77■■□□□ 1.4
TFAP2A-208ENST00000466073 MYO5BQ9ULV0 1848 aa23.77■■□□□ 1.4
TFAP2A-208ENST00000466073 NWD1Q149M9 1564 aa23.75■■□□□ 1.39
TFAP2A-208ENST00000466073 TMEM131LA2VDJ0 1609 aa23.74■■□□□ 1.39
TFAP2A-208ENST00000466073 NKTRP30414 1462 aaKnown RBP23.73■■□□□ 1.39
TFAP2A-208ENST00000466073 ZFYVE9O95405 1425 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms