RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 NUP153P49790 1475 aaKnown RBP9.21□□□□□ -0.93
CHMP3-206ENST00000466032 PLB1Q6P1J6 1458 aa9.21□□□□□ -0.93
CHMP3-206ENST00000466032 LRRC9Q6ZRR7 1453 aa9.21□□□□□ -0.93
CHMP3-206ENST00000466032 PLEKHD1A6NEE1 506 aa9.21□□□□□ -0.94
CHMP3-206ENST00000466032 ARHGEF11O15085 1522 aa9.21□□□□□ -0.94
CHMP3-206ENST00000466032 EHBP1L1Q8N3D4 1523 aa9.21□□□□□ -0.94
CHMP3-206ENST00000466032 DOK7Q18PE1 504 aa9.2□□□□□ -0.94
CHMP3-206ENST00000466032 TRIM26Q12899 539 aaPredicted RBP9.19□□□□□ -0.94
CHMP3-206ENST00000466032 KDM5BQ9UGL1 1544 aa9.19□□□□□ -0.94
CHMP3-206ENST00000466032 ERCC6L2Q5T890 1561 aa9.19□□□□□ -0.94
CHMP3-206ENST00000466032 LOC100996750A0A140TA64 210 aa9.18□□□□□ -0.94
CHMP3-206ENST00000466032 ATP10BO94823 1461 aa9.18□□□□□ -0.94
CHMP3-206ENST00000466032 TTBK1Q5TCY1 1321 aaPredicted RBP9.18□□□□□ -0.94
CHMP3-206ENST00000466032 KRTAP4-6Q9BYQ5 205 aa9.18□□□□□ -0.94
CHMP3-206ENST00000466032 TROQ12816 1431 aaPredicted RBP9.17□□□□□ -0.94
CHMP3-206ENST00000466032 LSM11P83369 360 aaKnown RBP eCLIP9.16□□□□□ -0.94
CHMP3-206ENST00000466032 SUPT6HQ7KZ85 1726 aaKnown RBP9.16□□□□□ -0.94
CHMP3-206ENST00000466032 RIMBP3CA6NJZ7 1639 aa9.15□□□□□ -0.94
CHMP3-206ENST00000466032 RIMBP3BA6NNM3 1639 aa9.15□□□□□ -0.94
CHMP3-206ENST00000466032 RIMBP3Q9UFD9 1639 aa9.15□□□□□ -0.94
CHMP3-206ENST00000466032 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.14□□□□□ -0.95
CHMP3-206ENST00000466032 SPDYE4A6NLX3 237 aa9.14□□□□□ -0.95
CHMP3-206ENST00000466032 KANK4Q5T7N3 995 aaPredicted RBP9.14□□□□□ -0.95
CHMP3-206ENST00000466032 MYT1Q01538 1121 aa9.13□□□□□ -0.95
CHMP3-206ENST00000466032 CDK13Q14004 1512 aaKnown RBP9.13□□□□□ -0.95
CHMP3-206ENST00000466032 MIA2Q96PC5 1412 aa9.13□□□□□ -0.95
CHMP3-206ENST00000466032 ADCY10Q96PN6 1610 aa9.13□□□□□ -0.95
CHMP3-206ENST00000466032 LRRIQ1Q96JM4 1722 aa9.12□□□□□ -0.95
CHMP3-206ENST00000466032 IFFO2Q5TF58 517 aa9.12□□□□□ -0.95
CHMP3-206ENST00000466032 NCOA2Q15596 1464 aa9.12□□□□□ -0.95
CHMP3-206ENST00000466032 KIF14Q15058 1648 aa9.12□□□□□ -0.95
CHMP3-206ENST00000466032 CYB5RLQ6IPT4 315 aa9.11□□□□□ -0.95
CHMP3-206ENST00000466032 ZCCHC11Q5TAX3 1644 aaKnown RBP9.11□□□□□ -0.95
CHMP3-206ENST00000466032 RRBP1Q9P2E9 1410 aaKnown RBP9.11□□□□□ -0.95
CHMP3-206ENST00000466032 CCNB3Q8WWL7 1395 aa9.11□□□□□ -0.95
CHMP3-206ENST00000466032 ZSWIM6Q9HCJ5 1215 aa9.1□□□□□ -0.95
CHMP3-206ENST00000466032 MYOM3Q5VTT5 1437 aa9.1□□□□□ -0.95
CHMP3-206ENST00000466032 MAPKBP1O60336 1514 aa9.1□□□□□ -0.95
CHMP3-206ENST00000466032 WDR7Q9Y4E6 1490 aa9.09□□□□□ -0.95
CHMP3-206ENST00000466032 ACIN1Q9UKV3 1341 aaKnown RBP9.09□□□□□ -0.95
CHMP3-206ENST00000466032 RIMBP2O15034 1052 aa9.09□□□□□ -0.95
CHMP3-206ENST00000466032 RSPH4AQ5TD94 716 aa9.09□□□□□ -0.95
CHMP3-206ENST00000466032 Q6ZNB5 142 aa9.09□□□□□ -0.95
CHMP3-206ENST00000466032 ITSN2Q9NZM3 1697 aa9.08□□□□□ -0.96
CHMP3-206ENST00000466032 MAGI3Q5TCQ9 1506 aa9.08□□□□□ -0.96
CHMP3-206ENST00000466032 FGD6Q6ZV73 1430 aa9.07□□□□□ -0.96
CHMP3-206ENST00000466032 ASXL2Q76L83 1435 aa9.07□□□□□ -0.96
CHMP3-206ENST00000466032 ARAP3Q8WWN8 1544 aa9.07□□□□□ -0.96
CHMP3-206ENST00000466032 ARID3CA6NKF2 412 aa9.07□□□□□ -0.96
CHMP3-206ENST00000466032 PPARGC1BQ86YN6 1023 aaKnown RBP9.07□□□□□ -0.96
CHMP3-206ENST00000466032 PHLDB1Q86UU1 1377 aa9.07□□□□□ -0.96
CHMP3-206ENST00000466032 GPR153Q6NV75 609 aa9.06□□□□□ -0.96
CHMP3-206ENST00000466032 ILDR1Q86SU0 546 aaPredicted RBP9.06□□□□□ -0.96
CHMP3-206ENST00000466032 CFDP1Q9UEE9 299 aaPredicted RBP9.06□□□□□ -0.96
CHMP3-206ENST00000466032 ABCC10Q5T3U5 1492 aa9.06□□□□□ -0.96
CHMP3-206ENST00000466032 PLEKHH2Q8IVE3 1493 aa9.06□□□□□ -0.96
CHMP3-206ENST00000466032 TCOF1Q13428 1488 aaKnown RBP9.05□□□□□ -0.96
CHMP3-206ENST00000466032 EFCAB2Q5VUJ9 269 aa9.04□□□□□ -0.96
CHMP3-206ENST00000466032 GPATCH8Q9UKJ3 1502 aaKnown RBP9.04□□□□□ -0.96
CHMP3-206ENST00000466032 PLCH2O75038 1416 aa9.04□□□□□ -0.96
CHMP3-206ENST00000466032 KCNH8Q96L42 1107 aa9.03□□□□□ -0.96
CHMP3-206ENST00000466032 ABCA9Q8IUA7 1624 aa9.02□□□□□ -0.96
CHMP3-206ENST00000466032 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.02□□□□□ -0.97
CHMP3-206ENST00000466032 PCGF6Q9BYE7 350 aa9.02□□□□□ -0.97
CHMP3-206ENST00000466032 KIAA1107Q9UPP5 1409 aa9.02□□□□□ -0.97
CHMP3-206ENST00000466032 GLI2P10070 1586 aa9.02□□□□□ -0.97
CHMP3-206ENST00000466032 PTPN23Q9H3S7 1636 aa9.02□□□□□ -0.97
CHMP3-206ENST00000466032 LCE2BO14633 110 aa9.01□□□□□ -0.97
CHMP3-206ENST00000466032 FAM50AQ14320 339 aaKnown RBP9.01□□□□□ -0.97
CHMP3-206ENST00000466032 MYO5CQ9NQX4 1742 aa9.01□□□□□ -0.97
CHMP3-206ENST00000466032 PREX2Q70Z35 1606 aa9.01□□□□□ -0.97
CHMP3-206ENST00000466032 CFAP74Q9C0B2 1584 aa9□□□□□ -0.97
CHMP3-206ENST00000466032 HRCP23327 699 aa9□□□□□ -0.97
CHMP3-206ENST00000466032 CD109Q6YHK3 1445 aa8.99□□□□□ -0.97
CHMP3-206ENST00000466032 TSPY4P0CV99 314 aa8.99□□□□□ -0.97
CHMP3-206ENST00000466032 TSPY10P0CW01 314 aa8.99□□□□□ -0.97
CHMP3-206ENST00000466032 CDC42BPAQ5VT25 1732 aa8.99□□□□□ -0.97
CHMP3-206ENST00000466032 ARHGAP5Q13017 1502 aa8.99□□□□□ -0.97
CHMP3-206ENST00000466032 AKNAQ7Z591 1439 aa8.98□□□□□ -0.97
CHMP3-206ENST00000466032 A0A0G2JS52 829 aa8.98□□□□□ -0.97
CHMP3-206ENST00000466032 CAMSAP2Q08AD1 1489 aa8.97□□□□□ -0.97
CHMP3-206ENST00000466032 TEX14Q8IWB6 1497 aa8.97□□□□□ -0.97
CHMP3-206ENST00000466032 NEO1Q92859 1461 aa8.97□□□□□ -0.97
CHMP3-206ENST00000466032 NUBP1P53384 320 aa8.97□□□□□ -0.97
CHMP3-206ENST00000466032 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.97□□□□□ -0.972e-6■■■□□ 18.6
CHMP3-206ENST00000466032 ARHGEF5Q12774 1597 aa8.97□□□□□ -0.97
CHMP3-206ENST00000466032 TTC37Q6PGP7 1564 aa8.97□□□□□ -0.97
CHMP3-206ENST00000466032 ROCK1Q13464 1354 aa8.97□□□□□ -0.97
CHMP3-206ENST00000466032 FANCAO15360 1455 aa8.96□□□□□ -0.97
CHMP3-206ENST00000466032 SHANK2Q9UPX8 1470 aa8.96□□□□□ -0.97
CHMP3-206ENST00000466032 FAM69CQ0P6D2 419 aa8.96□□□□□ -0.98
CHMP3-206ENST00000466032 MKRN3Q13064 507 aaKnown RBP8.96□□□□□ -0.98
CHMP3-206ENST00000466032 ZNF777Q9ULD5 760 aaPredicted RBP8.96□□□□□ -0.98
CHMP3-206ENST00000466032 CDC42BPBQ9Y5S2 1711 aa8.96□□□□□ -0.98
CHMP3-206ENST00000466032 DNMT1P26358 1616 aaKnown RBP8.95□□□□□ -0.98
CHMP3-206ENST00000466032 DAPK1P53355 1430 aa8.95□□□□□ -0.98
CHMP3-206ENST00000466032 CCDC141Q6ZP82 1450 aa8.95□□□□□ -0.98
CHMP3-206ENST00000466032 DIP2BQ9P265 1576 aa8.95□□□□□ -0.98
CHMP3-206ENST00000466032 PBX2P40425 430 aa8.94□□□□□ -0.98
CHMP3-206ENST00000466032 ANKRD30AQ9BXX3 1397 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms