RNA–Protein interactions for RNA: ENST00000465209.1

COL11A1-207, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-207ENST00000465209 NEURL4Q96JN8 1562 aa17.67■□□□□ 0.42
COL11A1-207ENST00000465209 ZNF335Q9H4Z2 1342 aaPredicted RBP17.67■□□□□ 0.42
COL11A1-207ENST00000465209 PKD2Q13563 968 aa17.66■□□□□ 0.42
COL11A1-207ENST00000465209 PZPP20742 1482 aa17.66■□□□□ 0.42
COL11A1-207ENST00000465209 ILDR2Q71H61 639 aa17.63■□□□□ 0.41
COL11A1-207ENST00000465209 DISP3Q9P2K9 1392 aa17.63■□□□□ 0.41
COL11A1-207ENST00000465209 MAST1Q9Y2H9 1570 aa17.62■□□□□ 0.41
COL11A1-207ENST00000465209 RNF17Q9BXT8 1623 aaKnown RBP17.62■□□□□ 0.41
COL11A1-207ENST00000465209 LRRC9Q6ZRR7 1453 aa17.6■□□□□ 0.41
COL11A1-207ENST00000465209 TNRQ92752 1358 aa17.59■□□□□ 0.41
COL11A1-207ENST00000465209 ZC3H13Q5T200 1668 aaKnown RBP17.58■□□□□ 0.41
COL11A1-207ENST00000465209 MROH1Q8NDA8 1641 aa17.58■□□□□ 0.41
COL11A1-207ENST00000465209 VPS8Q8N3P4 1428 aa17.58■□□□□ 0.41
COL11A1-207ENST00000465209 KIF3BO15066 747 aa17.58■□□□□ 0.4
COL11A1-207ENST00000465209 FBXO31Q5XUX0 539 aaPredicted RBP17.58■□□□□ 0.4
COL11A1-207ENST00000465209 EIF2AK4Q9P2K8 1649 aaKnown RBP17.58■□□□□ 0.4
COL11A1-207ENST00000465209 RSPH4AQ5TD94 716 aa17.57■□□□□ 0.4
COL11A1-207ENST00000465209 DEPDC5O75140 1603 aa17.56■□□□□ 0.4
COL11A1-207ENST00000465209 ABCC3O15438 1527 aa17.56■□□□□ 0.4
COL11A1-207ENST00000465209 NLRP1Q9C000 1473 aa17.56■□□□□ 0.4
COL11A1-207ENST00000465209 VWDEQ8N2E2 1590 aa17.55■□□□□ 0.4
COL11A1-207ENST00000465209 MAP3K1Q13233 1512 aa17.55■□□□□ 0.4
COL11A1-207ENST00000465209 MIA2Q96PC5 1412 aa17.54■□□□□ 0.4
COL11A1-207ENST00000465209 CPS1P31327 1500 aa17.53■□□□□ 0.4
COL11A1-207ENST00000465209 MED14O60244 1454 aa17.53■□□□□ 0.4
COL11A1-207ENST00000465209 UGGT1Q9NYU2 1555 aa17.53■□□□□ 0.4
COL11A1-207ENST00000465209 ALKQ9UM73 1620 aa17.52■□□□□ 0.4
COL11A1-207ENST00000465209 CEP152O94986 1710 aa17.52■□□□□ 0.39
COL11A1-207ENST00000465209 WASHC2CQ9Y4E1 1318 aa17.51■□□□□ 0.39
COL11A1-207ENST00000465209 SHANK2Q9UPX8 1470 aa17.51■□□□□ 0.39
COL11A1-207ENST00000465209 UBAP1LF5GYI3 381 aa17.51■□□□□ 0.39
COL11A1-207ENST00000465209 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.51■□□□□ 0.39
COL11A1-207ENST00000465209 SOCS7O14512 581 aa17.5■□□□□ 0.39
COL11A1-207ENST00000465209 CROCC2H7BZ55 1655 aa17.5■□□□□ 0.39
COL11A1-207ENST00000465209 IQGAP1P46940 1657 aa17.5■□□□□ 0.39
COL11A1-207ENST00000465209 STRCP1A6NGW2 1772 aa17.5■□□□□ 0.39
COL11A1-207ENST00000465209 MYOM3Q5VTT5 1437 aa17.49■□□□□ 0.39
COL11A1-207ENST00000465209 ERVK-7P63135 1459 aa17.49■□□□□ 0.39
COL11A1-207ENST00000465209 KANK4Q5T7N3 995 aaPredicted RBP17.48■□□□□ 0.39
COL11A1-207ENST00000465209 UBR1Q8IWV7 1749 aa17.47■□□□□ 0.39
COL11A1-207ENST00000465209 TSPY4P0CV99 314 aa17.47■□□□□ 0.39
COL11A1-207ENST00000465209 TSPY10P0CW01 314 aa17.47■□□□□ 0.39
COL11A1-207ENST00000465209 PRDM15P57071 1507 aaPredicted RBP17.47■□□□□ 0.39
COL11A1-207ENST00000465209 NPHP4O75161 1426 aaPredicted RBP17.47■□□□□ 0.39
COL11A1-207ENST00000465209 DUOX2Q9NRD8 1548 aa17.46■□□□□ 0.39
COL11A1-207ENST00000465209 CFAP65Q6ZU64 1925 aaKnown RBP17.43■□□□□ 0.38
COL11A1-207ENST00000465209 LOC105371045A0A1W2PR82 267 aa17.43■□□□□ 0.38
COL11A1-207ENST00000465209 ANKLE2Q86XL3 938 aa17.43■□□□□ 0.38
COL11A1-207ENST00000465209 THEMISQ8N1K5 641 aaPredicted RBP17.43■□□□□ 0.38
COL11A1-207ENST00000465209 SYNMO15061 1565 aa17.42■□□□□ 0.38
COL11A1-207ENST00000465209 MED1Q15648 1581 aaPredicted RBP17.41■□□□□ 0.38
COL11A1-207ENST00000465209 PTPN23Q9H3S7 1636 aa17.41■□□□□ 0.38
COL11A1-207ENST00000465209 ARHGAP31Q2M1Z3 1444 aa17.4■□□□□ 0.38
COL11A1-207ENST00000465209 ARHGAP23Q9P227 1491 aa17.4■□□□□ 0.38
COL11A1-207ENST00000465209 ABCC5O15440 1437 aa17.39■□□□□ 0.38
COL11A1-207ENST00000465209 SLIT1O75093 1534 aa17.39■□□□□ 0.37
COL11A1-207ENST00000465209 LRRC7Q96NW7 1537 aa17.39■□□□□ 0.37
COL11A1-207ENST00000465209 ERBINQ96RT1 1412 aa17.38■□□□□ 0.37
COL11A1-207ENST00000465209 HSPA1LP34931 641 aa17.38■□□□□ 0.37
COL11A1-207ENST00000465209 KIF15Q9NS87 1388 aa17.38■□□□□ 0.37
COL11A1-207ENST00000465209 XIRP1Q702N8 1843 aaKnown RBP17.37■□□□□ 0.37
COL11A1-207ENST00000465209 SCAF11Q99590 1463 aaKnown RBP17.36■□□□□ 0.37
COL11A1-207ENST00000465209 TOM1O60784 492 aa17.35■□□□□ 0.37
COL11A1-207ENST00000465209 DAPK1P53355 1430 aa17.35■□□□□ 0.37
COL11A1-207ENST00000465209 PIK3C2BO00750 1634 aa17.35■□□□□ 0.37
COL11A1-207ENST00000465209 KDM5AP29375 1690 aaKnown RBP17.35■□□□□ 0.37
COL11A1-207ENST00000465209 PIP4K2BP78356 416 aa17.34■□□□□ 0.37
COL11A1-207ENST00000465209 LMTK2Q8IWU2 1503 aa17.34■□□□□ 0.37
COL11A1-207ENST00000465209 FGD6Q6ZV73 1430 aa17.32■□□□□ 0.36
COL11A1-207ENST00000465209 SCAF1Q9H7N4 1312 aaKnown RBP17.3■□□□□ 0.36
COL11A1-207ENST00000465209 LTKP29376 864 aa17.3■□□□□ 0.36
COL11A1-207ENST00000465209 EFCAB6Q5THR3 1501 aa17.28■□□□□ 0.36
COL11A1-207ENST00000465209 RRP7BPQ9NSQ0 103 aa17.27■□□□□ 0.36
COL11A1-207ENST00000465209 ADGRL2O95490 1459 aa17.26■□□□□ 0.35
COL11A1-207ENST00000465209 TMEM2Q9UHN6 1383 aa17.26■□□□□ 0.35
COL11A1-207ENST00000465209 NOS1P29475 1434 aa17.25■□□□□ 0.35
COL11A1-207ENST00000465209 TET3O43151 1660 aa17.25■□□□□ 0.35
COL11A1-207ENST00000465209 ADGRB3O60242 1522 aa17.24■□□□□ 0.35
COL11A1-207ENST00000465209 TXNDC2Q86VQ3 553 aa17.22■□□□□ 0.35
COL11A1-207ENST00000465209 ANKRD30AQ9BXX3 1397 aa17.22■□□□□ 0.35
COL11A1-207ENST00000465209 NWD1Q149M9 1564 aa17.22■□□□□ 0.35
COL11A1-207ENST00000465209 KANK1Q14678 1352 aa17.2■□□□□ 0.34
COL11A1-207ENST00000465209 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.2■□□□□ 0.34
COL11A1-207ENST00000465209 MYO5BQ9ULV0 1848 aa17.19■□□□□ 0.34
COL11A1-207ENST00000465209 IDI1Q13907 227 aa17.19■□□□□ 0.34
COL11A1-207ENST00000465209 CHIC2Q9UKJ5 165 aa17.17■□□□□ 0.34
COL11A1-207ENST00000465209 RPRD2Q5VT52 1461 aaKnown RBP17.17■□□□□ 0.34
COL11A1-207ENST00000465209 EID1Q9Y6B2 187 aa17.16■□□□□ 0.34
COL11A1-207ENST00000465209 GCC2Q8IWJ2 1684 aa17.16■□□□□ 0.34
COL11A1-207ENST00000465209 UNC13BO14795 1591 aa17.15■□□□□ 0.34
COL11A1-207ENST00000465209 ZFYVE9O95405 1425 aa17.15■□□□□ 0.34
COL11A1-207ENST00000465209 FAM135BQ49AJ0 1406 aa17.15■□□□□ 0.34
COL11A1-207ENST00000465209 NKTRP30414 1462 aaKnown RBP17.15■□□□□ 0.34
COL11A1-207ENST00000465209 ROBO1Q9Y6N7 1651 aa17.14■□□□□ 0.33
COL11A1-207ENST00000465209 APLP2Q06481 763 aa17.14■□□□□ 0.33
COL11A1-207ENST00000465209 TMEM131LA2VDJ0 1609 aa17.14■□□□□ 0.33
COL11A1-207ENST00000465209 TMEM94Q12767 1356 aa17.14■□□□□ 0.33
COL11A1-207ENST00000465209 ANKRD50Q9ULJ7 1429 aa17.13■□□□□ 0.33
COL11A1-207ENST00000465209 CHD2O14647 1828 aaKnown RBP17.12■□□□□ 0.33
COL11A1-207ENST00000465209 KCNA6P17658 529 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms