RNA–Protein interactions for RNA: ENST00000465057.5

CMTM1-207, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 797 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-207ENST00000465057 CDAN1Q8IWY9 1227 aa9.74□□□□□ -0.85
CMTM1-207ENST00000465057 PLPP6Q8IY26 295 aa9.74□□□□□ -0.85
CMTM1-207ENST00000465057 NCKAP5LQ9HCH0 1330 aa9.74□□□□□ -0.85
CMTM1-207ENST00000465057 ARSIQ5FYB1 569 aa9.73□□□□□ -0.85
CMTM1-207ENST00000465057 TOP2BQ02880 1626 aa9.72□□□□□ -0.85
CMTM1-207ENST00000465057 FAM205CA6NFA0 338 aa9.72□□□□□ -0.85
CMTM1-207ENST00000465057 CHMP7Q8WUX9 453 aaPredicted RBP9.72□□□□□ -0.85
CMTM1-207ENST00000465057 PAXIP1Q6ZW49 1069 aaPredicted RBP9.71□□□□□ -0.86
CMTM1-207ENST00000465057 HS3ST6Q96QI5 342 aa9.71□□□□□ -0.86
CMTM1-207ENST00000465057 ADAMTS12P58397 1594 aa9.71□□□□□ -0.86
CMTM1-207ENST00000465057 POTEB3A0JP26 581 aa9.7□□□□□ -0.86
CMTM1-207ENST00000465057 POTEBQ6S5H4 581 aa9.7□□□□□ -0.86
CMTM1-207ENST00000465057 CADPS2Q86UW7 1296 aa9.7□□□□□ -0.86
CMTM1-207ENST00000465057 KHSRPQ92945 711 aaKnown RBP eCLIP9.7□□□□□ -0.86
CMTM1-207ENST00000465057 CFAP44Q96MT7 982 aa9.7□□□□□ -0.86
CMTM1-207ENST00000465057 PPP1R15BQ5SWA1 713 aa9.69□□□□□ -0.86
CMTM1-207ENST00000465057 PTCD2Q8WV60 388 aaKnown RBP9.69□□□□□ -0.86
CMTM1-207ENST00000465057 PCDHGA4Q9Y5G9 962 aa9.69□□□□□ -0.86
CMTM1-207ENST00000465057 ERBB3P21860 1342 aa9.68□□□□□ -0.86
CMTM1-207ENST00000465057 LARP6Q9BRS8 491 aaKnown RBP9.68□□□□□ -0.86
CMTM1-207ENST00000465057 CEP170Q5SW79 1584 aa9.67□□□□□ -0.86
CMTM1-207ENST00000465057 WRNQ14191 1432 aaPredicted RBP eCLIP9.67□□□□□ -0.86
CMTM1-207ENST00000465057 MFSD10Q14728 455 aa9.67□□□□□ -0.86
CMTM1-207ENST00000465057 ERCC6L2Q5T890 1561 aa9.67□□□□□ -0.86
CMTM1-207ENST00000465057 GRIN2AQ12879 1464 aa9.66□□□□□ -0.86
CMTM1-207ENST00000465057 DDX27Q96GQ7 796 aaKnown RBP9.66□□□□□ -0.86
CMTM1-207ENST00000465057 NUDT7P0C024 238 aa9.65□□□□□ -0.86
CMTM1-207ENST00000465057 ZNF316A6NFI3 1004 aaPredicted RBP9.63□□□□□ -0.87
CMTM1-207ENST00000465057 TBC1D12O60347 775 aa9.63□□□□□ -0.87
CMTM1-207ENST00000465057 VARS2Q5ST30 1063 aaKnown RBP9.63□□□□□ -0.87
CMTM1-207ENST00000465057 SHROOM2Q13796 1616 aa9.63□□□□□ -0.87
CMTM1-207ENST00000465057 ERICH3Q5RHP9 1530 aa9.62□□□□□ -0.87
CMTM1-207ENST00000465057 OXER1Q8TDS5 423 aa9.62□□□□□ -0.87
CMTM1-207ENST00000465057 KDM4FA0A1W2PPD8 638 aa9.61□□□□□ -0.87
CMTM1-207ENST00000465057 NUP160Q12769 1436 aa9.61□□□□□ -0.87
CMTM1-207ENST00000465057 FHAD1B1AJZ9 1412 aa9.6□□□□□ -0.87
CMTM1-207ENST00000465057 ZNF687Q8N1G0 1237 aa9.59□□□□□ -0.87
CMTM1-207ENST00000465057 LHX6Q9UPM6 363 aa9.59□□□□□ -0.87
CMTM1-207ENST00000465057 RUSC2Q8N2Y8 1516 aa9.58□□□□□ -0.88
CMTM1-207ENST00000465057 UPF1Q92900 1129 aaKnown RBP eCLIP9.58□□□□□ -0.88
CMTM1-207ENST00000465057 KRTAP3-3Q9BYR6 98 aa9.57□□□□□ -0.88
CMTM1-207ENST00000465057 KRTAP3-2Q9BYR7 98 aa9.57□□□□□ -0.88
CMTM1-207ENST00000465057 KIF13AQ9H1H9 1805 aa9.55□□□□□ -0.88
CMTM1-207ENST00000465057 PSDA5PKW4 1024 aaPredicted RBP9.54□□□□□ -0.88
CMTM1-207ENST00000465057 CAMK2BQ13554 666 aa9.54□□□□□ -0.88
CMTM1-207ENST00000465057 EMILIN3Q9NT22 766 aa9.54□□□□□ -0.88
CMTM1-207ENST00000465057 CUL7Q14999 1698 aa9.53□□□□□ -0.88
CMTM1-207ENST00000465057 MAP3K9P80192 1104 aa9.52□□□□□ -0.89
CMTM1-207ENST00000465057 PRG4Q92954 1404 aaPredicted RBP9.52□□□□□ -0.89
CMTM1-207ENST00000465057 MMRN1Q13201 1228 aa9.51□□□□□ -0.89
CMTM1-207ENST00000465057 SPNS2Q8IVW8 549 aa9.51□□□□□ -0.89
CMTM1-207ENST00000465057 ANO8Q9HCE9 1232 aaPredicted RBP9.51□□□□□ -0.89
CMTM1-207ENST00000465057 EVI5O60447 810 aa9.5□□□□□ -0.89
CMTM1-207ENST00000465057 TSHZ2Q9NRE2 1034 aa9.5□□□□□ -0.89
CMTM1-207ENST00000465057 WDR70Q9NW82 654 aa9.48□□□□□ -0.89
CMTM1-207ENST00000465057 ADCY10Q96PN6 1610 aa9.48□□□□□ -0.89
CMTM1-207ENST00000465057 SLC24A1O60721 1099 aa9.47□□□□□ -0.89
CMTM1-207ENST00000465057 PBX2P40425 430 aa9.47□□□□□ -0.89
CMTM1-207ENST00000465057 PLCB2Q00722 1185 aa9.47□□□□□ -0.89
CMTM1-207ENST00000465057 POTEEQ6S8J3 1075 aa9.47□□□□□ -0.89
CMTM1-207ENST00000465057 JPH4Q96JJ6 628 aa9.47□□□□□ -0.89
CMTM1-207ENST00000465057 KIF27Q86VH2 1401 aa9.47□□□□□ -0.89
CMTM1-207ENST00000465057 PPP4R3BQ5MIZ7 849 aa9.46□□□□□ -0.9
CMTM1-207ENST00000465057 E2F4Q16254 413 aa9.45□□□□□ -0.9
CMTM1-207ENST00000465057 IGF1RP08069 1367 aa9.45□□□□□ -0.9
CMTM1-207ENST00000465057 DPYSL4O14531 572 aa9.44□□□□□ -0.9
CMTM1-207ENST00000465057 KIAA0586Q9BVV6 1533 aa9.44□□□□□ -0.9
CMTM1-207ENST00000465057 DIP2BQ9P265 1576 aa9.44□□□□□ -0.9
CMTM1-207ENST00000465057 TSPOAP1O95153 1857 aa9.44□□□□□ -0.9
CMTM1-207ENST00000465057 ARHGAP33O14559 1287 aa9.43□□□□□ -0.9
CMTM1-207ENST00000465057 FOSBP53539 338 aa9.43□□□□□ -0.9
CMTM1-207ENST00000465057 ZNF454Q8N9F8 522 aa9.43□□□□□ -0.9
CMTM1-207ENST00000465057 MAPKBP1O60336 1514 aa9.42□□□□□ -0.9
CMTM1-207ENST00000465057 AXIN2Q9Y2T1 843 aa9.42□□□□□ -0.9
CMTM1-207ENST00000465057 IQGAP2Q13576 1575 aa9.41□□□□□ -0.9
CMTM1-207ENST00000465057 LSM11P83369 360 aaKnown RBP eCLIP9.41□□□□□ -0.9
CMTM1-207ENST00000465057 ARIH1Q9Y4X5 557 aaPredicted RBP9.41□□□□□ -0.9
CMTM1-207ENST00000465057 ANKRD13DQ6ZTN6 518 aa9.4□□□□□ -0.9
CMTM1-207ENST00000465057 ABCC10Q5T3U5 1492 aa9.4□□□□□ -0.91
CMTM1-207ENST00000465057 CARMIL1Q5VZK9 1371 aa9.39□□□□□ -0.91
CMTM1-207ENST00000465057 BCL2L12Q9HB09 334 aa9.38□□□□□ -0.91
CMTM1-207ENST00000465057 CTTNBP2Q8WZ74 1663 aa9.38□□□□□ -0.91
CMTM1-207ENST00000465057 TTBK1Q5TCY1 1321 aaPredicted RBP9.37□□□□□ -0.91
CMTM1-207ENST00000465057 PHF14O94880 888 aa9.37□□□□□ -0.91
CMTM1-207ENST00000465057 PTGER2P43116 358 aa9.37□□□□□ -0.91
CMTM1-207ENST00000465057 PSEN2P49810 448 aa9.37□□□□□ -0.91
CMTM1-207ENST00000465057 PDIA6Q15084 440 aa9.37□□□□□ -0.91
CMTM1-207ENST00000465057 ZDHHC16Q969W1 377 aa9.37□□□□□ -0.91
CMTM1-207ENST00000465057 PCDHGA10Q9Y5H3 936 aa9.37□□□□□ -0.91
CMTM1-207ENST00000465057 SPDYE16A6NNV3 312 aaPredicted RBP9.36□□□□□ -0.91
CMTM1-207ENST00000465057 FAM69CQ0P6D2 419 aa9.36□□□□□ -0.91
CMTM1-207ENST00000465057 KDM6BO15054 1643 aa9.35□□□□□ -0.91
CMTM1-207ENST00000465057 DMRTA1Q5VZB9 504 aa9.35□□□□□ -0.91
CMTM1-207ENST00000465057 DISP1Q96F81 1524 aa9.35□□□□□ -0.91
CMTM1-207ENST00000465057 KIAA0556O60303 1618 aa9.34□□□□□ -0.91
CMTM1-207ENST00000465057 PTPRGP23470 1445 aa9.34□□□□□ -0.91
CMTM1-207ENST00000465057 CARMIL2Q6F5E8 1435 aa9.34□□□□□ -0.91
CMTM1-207ENST00000465057 PTPREP23469 700 aa9.34□□□□□ -0.91
CMTM1-207ENST00000465057 KCNH8Q96L42 1107 aa9.34□□□□□ -0.91
CMTM1-207ENST00000465057 KCNK17Q96T54 332 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms