RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 C19orf67A6NJJ6 358 aa15.98■□□□□ 0.15
APP-213ENST00000464867 AFAP1Q8N556 730 aa15.98■□□□□ 0.15
APP-213ENST00000464867 MYO5CQ9NQX4 1742 aa15.98■□□□□ 0.15
APP-213ENST00000464867 SUPT6HQ7KZ85 1726 aaKnown RBP15.97■□□□□ 0.15
APP-213ENST00000464867 REREQ9P2R6 1566 aa15.96■□□□□ 0.15
APP-213ENST00000464867 AGLP35573 1532 aa15.96■□□□□ 0.15
APP-213ENST00000464867 NPATQ14207 1427 aa15.95■□□□□ 0.14
APP-213ENST00000464867 DIP2CQ9Y2E4 1556 aa15.95■□□□□ 0.14
APP-213ENST00000464867 CREBZFQ9NS37 354 aa15.94■□□□□ 0.14
APP-213ENST00000464867 FARP1Q9Y4F1 1045 aaPredicted RBP15.94■□□□□ 0.14
APP-213ENST00000464867 KDM5CP41229 1560 aa15.93■□□□□ 0.14
APP-213ENST00000464867 PLA2R1Q13018 1463 aa15.91■□□□□ 0.14
APP-213ENST00000464867 CDK11AQ9UQ88 783 aaPredicted RBP15.91■□□□□ 0.14
APP-213ENST00000464867 ARHGAP5Q13017 1502 aa15.9■□□□□ 0.14
APP-213ENST00000464867 MLH3Q9UHC1 1453 aa15.9■□□□□ 0.14
APP-213ENST00000464867 MROH2AA6NES4 1674 aa15.89■□□□□ 0.13
APP-213ENST00000464867 ABCA6Q8N139 1617 aa15.89■□□□□ 0.13
APP-213ENST00000464867 ZMYM3Q14202 1370 aa15.88■□□□□ 0.13
APP-213ENST00000464867 CPS1P31327 1500 aa15.88■□□□□ 0.13
APP-213ENST00000464867 CDK13Q14004 1512 aaKnown RBP15.88■□□□□ 0.13
APP-213ENST00000464867 PTPRKQ15262 1439 aa15.87■□□□□ 0.13
APP-213ENST00000464867 ATP1B4Q9UN42 357 aaPredicted RBP15.87■□□□□ 0.13
APP-213ENST00000464867 ZNF142P52746 1687 aaPredicted RBP15.86■□□□□ 0.13
APP-213ENST00000464867 TCOF1Q13428 1488 aaKnown RBP15.86■□□□□ 0.13
APP-213ENST00000464867 CEP170BQ9Y4F5 1589 aaPredicted RBP15.84■□□□□ 0.13
APP-213ENST00000464867 MYO3AQ8NEV4 1616 aa15.84■□□□□ 0.13
APP-213ENST00000464867 KIF14Q15058 1648 aa15.83■□□□□ 0.12
APP-213ENST00000464867 SHANK2Q9UPX8 1470 aa15.81■□□□□ 0.12
APP-213ENST00000464867 CLIP1P30622 1438 aa15.8■□□□□ 0.12
APP-213ENST00000464867 CLTCQ00610 1675 aaKnown RBP15.79■□□□□ 0.12
APP-213ENST00000464867 KIDINS220Q9ULH0 1771 aa15.77■□□□□ 0.12
APP-213ENST00000464867 CD44P16070 742 aaKnown RBP15.77■□□□□ 0.12
APP-213ENST00000464867 FKBP8Q14318 412 aa15.77■□□□□ 0.12
APP-213ENST00000464867 POLR1AO95602 1720 aaPredicted RBP15.77■□□□□ 0.11
APP-213ENST00000464867 CDC42BPBQ9Y5S2 1711 aa15.76■□□□□ 0.11
APP-213ENST00000464867 RGS17Q9UGC6 210 aaPredicted RBP15.75■□□□□ 0.11
APP-213ENST00000464867 ITSN2Q9NZM3 1697 aa15.75■□□□□ 0.11
APP-213ENST00000464867 TROQ12816 1431 aaPredicted RBP15.75■□□□□ 0.11
APP-213ENST00000464867 ABCC1P33527 1531 aa15.73■□□□□ 0.11
APP-213ENST00000464867 A2ML1A8K2U0 1454 aa15.73■□□□□ 0.11
APP-213ENST00000464867 DNMT1P26358 1616 aaKnown RBP15.72■□□□□ 0.11
APP-213ENST00000464867 MNX1P50219 401 aaPredicted RBP15.72■□□□□ 0.11
APP-213ENST00000464867 GGT6Q6P531 493 aa15.72■□□□□ 0.11
APP-213ENST00000464867 ANKLE2Q86XL3 938 aa15.72■□□□□ 0.11
APP-213ENST00000464867 FMN1Q68DA7 1419 aa15.71■□□□□ 0.11
APP-213ENST00000464867 SPAG9O60271 1321 aaKnown RBP15.7■□□□□ 0.1
APP-213ENST00000464867 PREX2Q70Z35 1606 aa15.69■□□□□ 0.1
APP-213ENST00000464867 GABBR2O75899 941 aa15.69■□□□□ 0.1
APP-213ENST00000464867 ALKQ9UM73 1620 aa15.68■□□□□ 0.1
APP-213ENST00000464867 NEURL4Q96JN8 1562 aa15.67■□□□□ 0.1
APP-213ENST00000464867 VWDEQ8N2E2 1590 aa15.66■□□□□ 0.1
APP-213ENST00000464867 POTEAQ6S8J7 498 aa15.66■□□□□ 0.1
APP-213ENST00000464867 THEMISQ8N1K5 641 aaPredicted RBP15.66■□□□□ 0.1
APP-213ENST00000464867 ZNF777Q9ULD5 760 aaPredicted RBP15.66■□□□□ 0.1
APP-213ENST00000464867 SAMD9LQ8IVG5 1584 aa15.66■□□□□ 0.1
APP-213ENST00000464867 RNF17Q9BXT8 1623 aaKnown RBP15.65■□□□□ 0.1
APP-213ENST00000464867 A2MP01023 1474 aa15.64■□□□□ 0.09
APP-213ENST00000464867 NPHP4O75161 1426 aaPredicted RBP15.63■□□□□ 0.09
APP-213ENST00000464867 TNRQ92752 1358 aa15.62■□□□□ 0.09
APP-213ENST00000464867 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.62■□□□□ 0.09
APP-213ENST00000464867 EEA1Q15075 1411 aa15.61■□□□□ 0.09
APP-213ENST00000464867 ATP7AQ04656 1500 aa15.61■□□□□ 0.09
APP-213ENST00000464867 LRRC7Q96NW7 1537 aa15.6■□□□□ 0.09
APP-213ENST00000464867 SYNMO15061 1565 aa15.6■□□□□ 0.09
APP-213ENST00000464867 PLXNC1O60486 1568 aa15.6■□□□□ 0.09
APP-213ENST00000464867 CDC42BPAQ5VT25 1732 aa15.6■□□□□ 0.09
APP-213ENST00000464867 MED14O60244 1454 aa15.59■□□□□ 0.09
APP-213ENST00000464867 DEPDC5O75140 1603 aa15.59■□□□□ 0.09
APP-213ENST00000464867 HNRNPMP52272 730 aaKnown RBP eCLIP15.59■□□□□ 0.09
APP-213ENST00000464867 ZRANB1Q9UGI0 708 aa15.59■□□□□ 0.09
APP-213ENST00000464867 IQGAP1P46940 1657 aa15.58■□□□□ 0.08
APP-213ENST00000464867 SETD1AO15047 1707 aaKnown RBP15.58■□□□□ 0.08
APP-213ENST00000464867 SYCP2Q9BX26 1530 aa15.58■□□□□ 0.08
APP-213ENST00000464867 FAM135AQ9P2D6 1515 aa15.58■□□□□ 0.08
APP-213ENST00000464867 FBXO31Q5XUX0 539 aaPredicted RBP15.56■□□□□ 0.08
APP-213ENST00000464867 ADGBQ8N7X0 1667 aa15.56■□□□□ 0.08
APP-213ENST00000464867 STRCP1A6NGW2 1772 aa15.55■□□□□ 0.08
APP-213ENST00000464867 UGGT1Q9NYU2 1555 aa15.55■□□□□ 0.08
APP-213ENST00000464867 LRRIQ1Q96JM4 1722 aa15.54■□□□□ 0.08
APP-213ENST00000464867 INO80Q9ULG1 1556 aaPredicted RBP15.54■□□□□ 0.08
APP-213ENST00000464867 UBTFP17480 764 aaKnown RBP15.54■□□□□ 0.08
APP-213ENST00000464867 ZNF579Q8NAF0 562 aaKnown RBP15.54■□□□□ 0.08
APP-213ENST00000464867 PLEKHH2Q8IVE3 1493 aa15.53■□□□□ 0.08
APP-213ENST00000464867 NLRP1Q9C000 1473 aa15.53■□□□□ 0.08
APP-213ENST00000464867 UPF1Q92900 1129 aaKnown RBP eCLIP15.52■□□□□ 0.08
APP-213ENST00000464867 PZPP20742 1482 aa15.52■□□□□ 0.07
APP-213ENST00000464867 CCDC18Q5T9S5 1454 aa15.52■□□□□ 0.07
APP-213ENST00000464867 FAM135BQ49AJ0 1406 aa15.51■□□□□ 0.07
APP-213ENST00000464867 KIAA1107Q9UPP5 1409 aa15.51■□□□□ 0.07
APP-213ENST00000464867 MIER1Q8N108 512 aa15.51■□□□□ 0.07
APP-213ENST00000464867 MIA2Q96PC5 1412 aa15.51■□□□□ 0.07
APP-213ENST00000464867 WASHC2CQ9Y4E1 1318 aa15.5■□□□□ 0.07
APP-213ENST00000464867 CFDP1Q9UEE9 299 aaPredicted RBP15.5■□□□□ 0.07
APP-213ENST00000464867 ARHGAP35Q9NRY4 1499 aa15.5■□□□□ 0.07
APP-213ENST00000464867 KIF3BO15066 747 aa15.47■□□□□ 0.07
APP-213ENST00000464867 KDM5DQ9BY66 1539 aa15.47■□□□□ 0.07
APP-213ENST00000464867 GPATCH8Q9UKJ3 1502 aaKnown RBP15.46■□□□□ 0.07
APP-213ENST00000464867 DHX29Q7Z478 1369 aaKnown RBP15.45■□□□□ 0.06
APP-213ENST00000464867 PAK3O75914 559 aaPredicted RBP15.44■□□□□ 0.06
APP-213ENST00000464867 ZNF772Q68DY9 489 aaPredicted RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms