RNA–Protein interactions for RNA: ENST00000464611.1

ACTB-208, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 715 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-208ENST00000464611 CHIC2Q9UKJ5 165 aa11.88□□□□□ -0.51
ACTB-208ENST00000464611 ANKRD30BQ9BXX2 1392 aa11.88□□□□□ -0.51
ACTB-208ENST00000464611 RICTORQ6R327 1708 aa11.88□□□□□ -0.51
ACTB-208ENST00000464611 ZNF518AQ6AHZ1 1483 aa11.88□□□□□ -0.51
ACTB-208ENST00000464611 CROCC2H7BZ55 1655 aa11.87□□□□□ -0.51
ACTB-208ENST00000464611 POGZQ7Z3K3 1410 aa11.87□□□□□ -0.51
ACTB-208ENST00000464611 ANKRD30AQ9BXX3 1397 aa11.87□□□□□ -0.51
ACTB-208ENST00000464611 DENND4BO75064 1496 aaPredicted RBP11.87□□□□□ -0.51
ACTB-208ENST00000464611 RPRD2Q5VT52 1461 aaKnown RBP11.87□□□□□ -0.51
ACTB-208ENST00000464611 CCDC141Q6ZP82 1450 aa11.86□□□□□ -0.51
ACTB-208ENST00000464611 KDM5CP41229 1560 aa11.86□□□□□ -0.51
ACTB-208ENST00000464611 ADGBQ8N7X0 1667 aa11.86□□□□□ -0.51
ACTB-208ENST00000464611 ZMYM4Q5VZL5 1548 aa11.86□□□□□ -0.51
ACTB-208ENST00000464611 NCOA1Q15788 1441 aa11.86□□□□□ -0.51
ACTB-208ENST00000464611 FRMPD1Q5SYB0 1578 aa11.85□□□□□ -0.51
ACTB-208ENST00000464611 HECW2Q9P2P5 1572 aa11.85□□□□□ -0.51
ACTB-208ENST00000464611 SHANK2Q9UPX8 1470 aa11.85□□□□□ -0.51
ACTB-208ENST00000464611 ZNF777Q9ULD5 760 aaPredicted RBP11.85□□□□□ -0.51
ACTB-208ENST00000464611 SCAPERQ9BY12 1400 aa11.85□□□□□ -0.51
ACTB-208ENST00000464611 ARID4BQ4LE39 1312 aaPredicted RBP11.85□□□□□ -0.51
ACTB-208ENST00000464611 SLC4A2P04920 1241 aa11.83□□□□□ -0.52
ACTB-208ENST00000464611 SLC4A1APQ9BWU0 796 aaKnown RBP11.83□□□□□ -0.52
ACTB-208ENST00000464611 INO80Q9ULG1 1556 aaPredicted RBP11.83□□□□□ -0.52
ACTB-208ENST00000464611 MAST1Q9Y2H9 1570 aa11.83□□□□□ -0.52
ACTB-208ENST00000464611 SUPT16HQ9Y5B9 1047 aaKnown RBP11.82□□□□□ -0.52
ACTB-208ENST00000464611 MBD5Q9P267 1494 aa11.82□□□□□ -0.52
ACTB-208ENST00000464611 ZFYVE16Q7Z3T8 1539 aa11.81□□□□□ -0.52
ACTB-208ENST00000464611 ARHGEF40Q8TER5 1519 aa11.81□□□□□ -0.52
ACTB-208ENST00000464611 ARHGEF12Q9NZN5 1544 aa11.81□□□□□ -0.52
ACTB-208ENST00000464611 NEFLP07196 543 aa11.81□□□□□ -0.52
ACTB-208ENST00000464611 HSPA5P11021 654 aaKnown RBP11.81□□□□□ -0.52
ACTB-208ENST00000464611 L3MBTL2Q969R5 705 aa11.81□□□□□ -0.52
ACTB-208ENST00000464611 MAGI2Q86UL8 1455 aa11.81□□□□□ -0.52
ACTB-208ENST00000464611 TSPY4P0CV99 314 aa11.8□□□□□ -0.52
ACTB-208ENST00000464611 TSPY10P0CW01 314 aa11.8□□□□□ -0.52
ACTB-208ENST00000464611 ATP7AQ04656 1500 aa11.8□□□□□ -0.52
ACTB-208ENST00000464611 TRAPPC8Q9Y2L5 1435 aa11.79□□□□□ -0.52
ACTB-208ENST00000464611 MLH3Q9UHC1 1453 aa11.79□□□□□ -0.52
ACTB-208ENST00000464611 PLXNC1O60486 1568 aa11.79□□□□□ -0.52
ACTB-208ENST00000464611 ERICH6BQ5W0A0 696 aa11.78□□□□□ -0.52
ACTB-208ENST00000464611 ZNF644Q9H582 1327 aaPredicted RBP11.78□□□□□ -0.52
ACTB-208ENST00000464611 RTEL1-TNFRSF6BF6WH68 1400 aa11.77□□□□□ -0.52
ACTB-208ENST00000464611 C9orf84Q5VXU9 1444 aa11.77□□□□□ -0.52
ACTB-208ENST00000464611 COL17A1Q9UMD9 1497 aaPredicted RBP11.77□□□□□ -0.52
ACTB-208ENST00000464611 KIDINS220Q9ULH0 1771 aa11.77□□□□□ -0.53
ACTB-208ENST00000464611 CNTLNQ9NXG0 1405 aa11.77□□□□□ -0.53
ACTB-208ENST00000464611 ANKRD50Q9ULJ7 1429 aa11.77□□□□□ -0.53
ACTB-208ENST00000464611 KDM5DQ9BY66 1539 aa11.76□□□□□ -0.53
ACTB-208ENST00000464611 ABCA6Q8N139 1617 aa11.76□□□□□ -0.53
ACTB-208ENST00000464611 PZPP20742 1482 aa11.76□□□□□ -0.53
ACTB-208ENST00000464611 REREQ9P2R6 1566 aa11.75□□□□□ -0.53
ACTB-208ENST00000464611 DIP2CQ9Y2E4 1556 aa11.75□□□□□ -0.53
ACTB-208ENST00000464611 POLR1AO95602 1720 aaPredicted RBP11.75□□□□□ -0.53
ACTB-208ENST00000464611 HNRNPMP52272 730 aaKnown RBP eCLIP11.75□□□□□ -0.53
ACTB-208ENST00000464611 SPAG9O60271 1321 aaKnown RBP11.75□□□□□ -0.53
ACTB-208ENST00000464611 WASHC2AQ641Q2 1341 aa11.75□□□□□ -0.53
ACTB-208ENST00000464611 CCDC7Q96M83 1385 aa11.75□□□□□ -0.53
ACTB-208ENST00000464611 RAPGEF3O95398 923 aa11.74□□□□□ -0.53
ACTB-208ENST00000464611 ROCK2O75116 1388 aaKnown RBP11.74□□□□□ -0.53
ACTB-208ENST00000464611 SPATA31E1Q6ZUB1 1445 aa11.74□□□□□ -0.53
ACTB-208ENST00000464611 UHRF1BP1Q6BDS2 1440 aa11.73□□□□□ -0.53
ACTB-208ENST00000464611 EIF2AK4Q9P2K8 1649 aaKnown RBP11.72□□□□□ -0.53
ACTB-208ENST00000464611 HIRIP3Q9BW71 556 aaPredicted RBP11.72□□□□□ -0.53
ACTB-208ENST00000464611 MYT1LQ9UL68 1186 aa11.72□□□□□ -0.53
ACTB-208ENST00000464611 DUOX2Q9NRD8 1548 aa11.71□□□□□ -0.53
ACTB-208ENST00000464611 SAMD1Q6SPF0 538 aaPredicted RBP11.71□□□□□ -0.53
ACTB-208ENST00000464611 AFAP1Q8N556 730 aa11.71□□□□□ -0.53
ACTB-208ENST00000464611 YEATS2Q9ULM3 1422 aa11.7□□□□□ -0.54
ACTB-208ENST00000464611 KTN1Q86UP2 1357 aaKnown RBP11.7□□□□□ -0.54
ACTB-208ENST00000464611 PKD2Q13563 968 aa11.7□□□□□ -0.54
ACTB-208ENST00000464611 ATP10AO60312 1499 aa11.7□□□□□ -0.54
ACTB-208ENST00000464611 A2MP01023 1474 aa11.7□□□□□ -0.54
ACTB-208ENST00000464611 ERBINQ96RT1 1412 aa11.69□□□□□ -0.54
ACTB-208ENST00000464611 BCORL1Q5H9F3 1711 aa11.69□□□□□ -0.54
ACTB-208ENST00000464611 NUP155O75694 1391 aa11.68□□□□□ -0.54
ACTB-208ENST00000464611 KIF15Q9NS87 1388 aa11.68□□□□□ -0.54
ACTB-208ENST00000464611 NBPF8Q3BBV2 869 aa11.68□□□□□ -0.54
ACTB-208ENST00000464611 PRKRIP1Q9H875 184 aaPredicted RBP11.68□□□□□ -0.54
ACTB-208ENST00000464611 AGLP35573 1532 aa11.68□□□□□ -0.54
ACTB-208ENST00000464611 PIP4P2Q8N4L2 257 aa11.67□□□□□ -0.54
ACTB-208ENST00000464611 STAC3Q96MF2 364 aa11.67□□□□□ -0.54
ACTB-208ENST00000464611 HAX1O00165 279 aa11.66□□□□□ -0.54
ACTB-208ENST00000464611 FKBP8Q14318 412 aa11.66□□□□□ -0.54
ACTB-208ENST00000464611 RALGAPBQ86X10 1494 aa11.65□□□□□ -0.54
ACTB-208ENST00000464611 RNF17Q9BXT8 1623 aaKnown RBP11.65□□□□□ -0.54
ACTB-208ENST00000464611 FAM135AQ9P2D6 1515 aa11.65□□□□□ -0.55
ACTB-208ENST00000464611 KIF7Q2M1P5 1343 aa11.64□□□□□ -0.55
ACTB-208ENST00000464611 HNRNPUQ00839 825 aaKnown RBP eCLIP11.64□□□□□ -0.55
ACTB-208ENST00000464611 DHX29Q7Z478 1369 aaKnown RBP11.64□□□□□ -0.55
ACTB-208ENST00000464611 DEPDC5O75140 1603 aa11.64□□□□□ -0.55
ACTB-208ENST00000464611 ZC3H13Q5T200 1668 aaKnown RBP11.63□□□□□ -0.55
ACTB-208ENST00000464611 USP47Q96K76 1375 aa11.63□□□□□ -0.55
ACTB-208ENST00000464611 SIGLEC1Q9BZZ2 1709 aa11.63□□□□□ -0.55
ACTB-208ENST00000464611 UNC13BO14795 1591 aa11.62□□□□□ -0.55
ACTB-208ENST00000464611 PRDM15P57071 1507 aaPredicted RBP11.62□□□□□ -0.55
ACTB-208ENST00000464611 ZBED9Q6R2W3 1325 aa11.61□□□□□ -0.55
ACTB-208ENST00000464611 POLA2Q14181 598 aa11.61□□□□□ -0.55
ACTB-208ENST00000464611 AKT1S1Q96B36 256 aa11.61□□□□□ -0.55
ACTB-208ENST00000464611 MRS2Q9HD23 443 aa11.6□□□□□ -0.55
ACTB-208ENST00000464611 WASHC2CQ9Y4E1 1318 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms