RNA–Protein interactions for RNA: ENST00000464408.3

ALMS1-202, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-202ENST00000464408 MAST1Q9Y2H9 1570 aa22.97■■□□□ 1.27
ALMS1-202ENST00000464408 FBXO31Q5XUX0 539 aaPredicted RBP22.95■■□□□ 1.26
ALMS1-202ENST00000464408 TSPY4P0CV99 314 aa22.94■■□□□ 1.26
ALMS1-202ENST00000464408 TSPY10P0CW01 314 aa22.94■■□□□ 1.26
ALMS1-202ENST00000464408 DNMT1P26358 1616 aaKnown RBP22.93■■□□□ 1.26
ALMS1-202ENST00000464408 A2ML1A8K2U0 1454 aa22.92■■□□□ 1.26
ALMS1-202ENST00000464408 PLA2R1Q13018 1463 aa22.92■■□□□ 1.26
ALMS1-202ENST00000464408 RNF17Q9BXT8 1623 aaKnown RBP22.92■■□□□ 1.26
ALMS1-202ENST00000464408 PZPP20742 1482 aa22.92■■□□□ 1.26
ALMS1-202ENST00000464408 TCOF1Q13428 1488 aaKnown RBP22.92■■□□□ 1.26
ALMS1-202ENST00000464408 MIA2Q96PC5 1412 aa22.91■■□□□ 1.26
ALMS1-202ENST00000464408 FAM135AQ9P2D6 1515 aa22.91■■□□□ 1.26
ALMS1-202ENST00000464408 WASHC2CQ9Y4E1 1318 aa22.9■■□□□ 1.26
ALMS1-202ENST00000464408 TNRQ92752 1358 aa22.89■■□□□ 1.26
ALMS1-202ENST00000464408 MROH1Q8NDA8 1641 aa22.88■■□□□ 1.25
ALMS1-202ENST00000464408 CROCC2H7BZ55 1655 aa22.87■■□□□ 1.25
ALMS1-202ENST00000464408 PTPN23Q9H3S7 1636 aa22.86■■□□□ 1.25
ALMS1-202ENST00000464408 EIF2AK4Q9P2K8 1649 aaKnown RBP22.86■■□□□ 1.25
ALMS1-202ENST00000464408 ZNF335Q9H4Z2 1342 aaPredicted RBP22.86■■□□□ 1.25
ALMS1-202ENST00000464408 ABCC3O15438 1527 aa22.86■■□□□ 1.25
ALMS1-202ENST00000464408 PKD2Q13563 968 aa22.85■■□□□ 1.25
ALMS1-202ENST00000464408 CEP152O94986 1710 aa22.85■■□□□ 1.25
ALMS1-202ENST00000464408 POLR1AO95602 1720 aaPredicted RBP22.85■■□□□ 1.25
ALMS1-202ENST00000464408 NEURL4Q96JN8 1562 aa22.83■■□□□ 1.25
ALMS1-202ENST00000464408 ZC3H13Q5T200 1668 aaKnown RBP22.83■■□□□ 1.24
ALMS1-202ENST00000464408 ABCC5O15440 1437 aa22.82■■□□□ 1.24
ALMS1-202ENST00000464408 CFAP65Q6ZU64 1925 aaKnown RBP22.82■■□□□ 1.24
ALMS1-202ENST00000464408 DUOX2Q9NRD8 1548 aa22.81■■□□□ 1.24
ALMS1-202ENST00000464408 APLP2Q06481 763 aa22.8■■□□□ 1.24
ALMS1-202ENST00000464408 IQSEC2Q5JU85 1478 aa22.79■■□□□ 1.24
ALMS1-202ENST00000464408 SHANK2Q9UPX8 1470 aa22.79■■□□□ 1.24
ALMS1-202ENST00000464408 FGD6Q6ZV73 1430 aa22.78■■□□□ 1.24
ALMS1-202ENST00000464408 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.77■■□□□ 1.24
ALMS1-202ENST00000464408 SPATA31D1Q6ZQQ2 1576 aa22.77■■□□□ 1.24
ALMS1-202ENST00000464408 NLRP1Q9C000 1473 aa22.77■■□□□ 1.24
ALMS1-202ENST00000464408 KIF15Q9NS87 1388 aa22.76■■□□□ 1.23
ALMS1-202ENST00000464408 UGGT1Q9NYU2 1555 aa22.76■■□□□ 1.23
ALMS1-202ENST00000464408 DAPK1P53355 1430 aa22.76■■□□□ 1.23
ALMS1-202ENST00000464408 ERVK-7P63135 1459 aa22.75■■□□□ 1.23
ALMS1-202ENST00000464408 RRP7BPQ9NSQ0 103 aa22.75■■□□□ 1.23
ALMS1-202ENST00000464408 PRDM15P57071 1507 aaPredicted RBP22.73■■□□□ 1.23
ALMS1-202ENST00000464408 ERBINQ96RT1 1412 aa22.71■■□□□ 1.23
ALMS1-202ENST00000464408 DEPDC5O75140 1603 aa22.7■■□□□ 1.22
ALMS1-202ENST00000464408 THEMISQ8N1K5 641 aaPredicted RBP22.69■■□□□ 1.22
ALMS1-202ENST00000464408 CHIC2Q9UKJ5 165 aa22.69■■□□□ 1.22
ALMS1-202ENST00000464408 ANKLE2Q86XL3 938 aa22.68■■□□□ 1.22
ALMS1-202ENST00000464408 UBR1Q8IWV7 1749 aa22.68■■□□□ 1.22
ALMS1-202ENST00000464408 VWDEQ8N2E2 1590 aa22.67■■□□□ 1.22
ALMS1-202ENST00000464408 IQGAP1P46940 1657 aa22.66■■□□□ 1.22
ALMS1-202ENST00000464408 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.66■■□□□ 1.22
ALMS1-202ENST00000464408 MED14O60244 1454 aa22.66■■□□□ 1.22
ALMS1-202ENST00000464408 NPHP4O75161 1426 aaPredicted RBP22.65■■□□□ 1.22
ALMS1-202ENST00000464408 UBAP1LF5GYI3 381 aa22.65■■□□□ 1.22
ALMS1-202ENST00000464408 STRCP1A6NGW2 1772 aa22.62■■□□□ 1.21
ALMS1-202ENST00000464408 ARHGAP31Q2M1Z3 1444 aa22.62■■□□□ 1.21
ALMS1-202ENST00000464408 ANKRD30AQ9BXX3 1397 aa22.62■■□□□ 1.21
ALMS1-202ENST00000464408 CPS1P31327 1500 aa22.62■■□□□ 1.21
ALMS1-202ENST00000464408 DISP3Q9P2K9 1392 aa22.6■■□□□ 1.21
ALMS1-202ENST00000464408 FAM50AQ14320 339 aaKnown RBP22.59■■□□□ 1.21
ALMS1-202ENST00000464408 PIK3C2BO00750 1634 aa22.59■■□□□ 1.21
ALMS1-202ENST00000464408 ADGRL2O95490 1459 aa22.59■■□□□ 1.21
ALMS1-202ENST00000464408 LMTK2Q8IWU2 1503 aa22.57■■□□□ 1.2
ALMS1-202ENST00000464408 ARHGAP23Q9P227 1491 aa22.55■■□□□ 1.2
ALMS1-202ENST00000464408 KANK1Q14678 1352 aa22.55■■□□□ 1.2
ALMS1-202ENST00000464408 SYNMO15061 1565 aa22.55■■□□□ 1.2
ALMS1-202ENST00000464408 SLIT1O75093 1534 aa22.54■■□□□ 1.2
ALMS1-202ENST00000464408 SCAF11Q99590 1463 aaKnown RBP22.54■■□□□ 1.2
ALMS1-202ENST00000464408 LTKP29376 864 aa22.53■■□□□ 1.2
ALMS1-202ENST00000464408 ILDR2Q71H61 639 aa22.53■■□□□ 1.2
ALMS1-202ENST00000464408 ALKQ9UM73 1620 aa22.53■■□□□ 1.2
ALMS1-202ENST00000464408 EFCAB6Q5THR3 1501 aa22.52■■□□□ 1.2
ALMS1-202ENST00000464408 PIP4K2BP78356 416 aa22.5■■□□□ 1.19
ALMS1-202ENST00000464408 SCAF1Q9H7N4 1312 aaKnown RBP22.49■■□□□ 1.19
ALMS1-202ENST00000464408 ANKRD50Q9ULJ7 1429 aa22.48■■□□□ 1.19
ALMS1-202ENST00000464408 LRRC7Q96NW7 1537 aa22.48■■□□□ 1.19
ALMS1-202ENST00000464408 TXNDC2Q86VQ3 553 aa22.48■■□□□ 1.19
ALMS1-202ENST00000464408 NOS1P29475 1434 aa22.47■■□□□ 1.19
ALMS1-202ENST00000464408 IDI1Q13907 227 aa22.46■■□□□ 1.19
ALMS1-202ENST00000464408 KDM5AP29375 1690 aaKnown RBP22.46■■□□□ 1.19
ALMS1-202ENST00000464408 HSPA1LP34931 641 aa22.45■■□□□ 1.18
ALMS1-202ENST00000464408 TMEM2Q9UHN6 1383 aa22.45■■□□□ 1.18
ALMS1-202ENST00000464408 TOM1O60784 492 aa22.44■■□□□ 1.18
ALMS1-202ENST00000464408 XIRP1Q702N8 1843 aaKnown RBP22.44■■□□□ 1.18
ALMS1-202ENST00000464408 PPARGC1BQ86YN6 1023 aaKnown RBP22.44■■□□□ 1.18
ALMS1-202ENST00000464408 MYO5BQ9ULV0 1848 aa22.43■■□□□ 1.18
ALMS1-202ENST00000464408 TET3O43151 1660 aa22.42■■□□□ 1.18
ALMS1-202ENST00000464408 ADGRB3O60242 1522 aa22.42■■□□□ 1.18
ALMS1-202ENST00000464408 STAG3Q9UJ98 1225 aa22.42■■□□□ 1.18
ALMS1-202ENST00000464408 UNC13BO14795 1591 aa22.42■■□□□ 1.18
ALMS1-202ENST00000464408 EID1Q9Y6B2 187 aa22.4■■□□□ 1.18
ALMS1-202ENST00000464408 GCC2Q8IWJ2 1684 aa22.39■■□□□ 1.18
ALMS1-202ENST00000464408 RPRD2Q5VT52 1461 aaKnown RBP22.37■■□□□ 1.17
ALMS1-202ENST00000464408 E9PCH4 1651 aa22.36■■□□□ 1.17
ALMS1-202ENST00000464408 SENP3Q9H4L4 574 aaPredicted RBP22.35■■□□□ 1.17
ALMS1-202ENST00000464408 ITGAEP38570 1179 aa22.34■■□□□ 1.17
ALMS1-202ENST00000464408 ROCK1Q13464 1354 aa22.34■■□□□ 1.17
ALMS1-202ENST00000464408 SLC52A1Q9NWF4 448 aa22.33■■□□□ 1.17
ALMS1-202ENST00000464408 MED1Q15648 1581 aaPredicted RBP22.33■■□□□ 1.16
ALMS1-202ENST00000464408 TMEM131LA2VDJ0 1609 aa22.32■■□□□ 1.16
ALMS1-202ENST00000464408 IQGAP3Q86VI3 1631 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms