RNA–Protein interactions for RNA: ENST00000464395.1

PITRM1-209, Transcript of pitrilysin metallopeptidase 1, humanhuman

TSL 1 (best)

Gene PITRM1, Length 3,240 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-209ENST00000464395 TSPY4P0CV99 314 aa15.22■□□□□ 0.03
PITRM1-209ENST00000464395 TSPY10P0CW01 314 aa15.22■□□□□ 0.03
PITRM1-209ENST00000464395 PLCH2O75038 1416 aa15.22■□□□□ 0.03
PITRM1-209ENST00000464395 ARAP3Q8WWN8 1544 aa15.22■□□□□ 0.03
PITRM1-209ENST00000464395 PRAG1Q86YV5 1406 aa15.22■□□□□ 0.03
PITRM1-209ENST00000464395 RNF17Q9BXT8 1623 aaKnown RBP15.22■□□□□ 0.03
PITRM1-209ENST00000464395 DEPDC5O75140 1603 aa15.21■□□□□ 0.03
PITRM1-209ENST00000464395 A2MP01023 1474 aa15.2■□□□□ 0.02
PITRM1-209ENST00000464395 PRDM15P57071 1507 aaPredicted RBP15.2■□□□□ 0.02
PITRM1-209ENST00000464395 ERBINQ96RT1 1412 aa15.2■□□□□ 0.02
PITRM1-209ENST00000464395 GPRASP1Q5JY77 1395 aa15.19■□□□□ 0.02
PITRM1-209ENST00000464395 HNRNPUQ00839 825 aaKnown RBP eCLIP15.19■□□□□ 0.02
PITRM1-209ENST00000464395 ABCA9Q8IUA7 1624 aa15.18■□□□□ 0.02
PITRM1-209ENST00000464395 ZBED9Q6R2W3 1325 aa15.16■□□□□ 0.02
PITRM1-209ENST00000464395 ZFYVE16Q7Z3T8 1539 aa15.16■□□□□ 0.02
PITRM1-209ENST00000464395 VWDEQ8N2E2 1590 aa15.15■□□□□ 0.02
PITRM1-209ENST00000464395 BCANQ96GW7 911 aa15.15■□□□□ 0.02
PITRM1-209ENST00000464395 CEP152O94986 1710 aa15.15■□□□□ 0.02
PITRM1-209ENST00000464395 TRAPPC8Q9Y2L5 1435 aa15.15■□□□□ 0.02
PITRM1-209ENST00000464395 INO80Q9ULG1 1556 aaPredicted RBP15.14■□□□□ 0.01
PITRM1-209ENST00000464395 EIF2AK4Q9P2K8 1649 aaKnown RBP15.14■□□□□ 0.01
PITRM1-209ENST00000464395 ROCK2O75116 1388 aaKnown RBP15.14■□□□□ 0.01
PITRM1-209ENST00000464395 SPHKAPQ2M3C7 1700 aa15.13■□□□□ 0.01
PITRM1-209ENST00000464395 IQGAP1P46940 1657 aa15.12■□□□□ 0.01
PITRM1-209ENST00000464395 MADDQ8WXG6 1647 aa15.12■□□□□ 0.01
PITRM1-209ENST00000464395 CCDC144AA2RUR9 1427 aa15.12■□□□□ 0.01
PITRM1-209ENST00000464395 RTEL1-TNFRSF6BF6WH68 1400 aa15.11■□□□□ 0.01
PITRM1-209ENST00000464395 MRS2Q9HD23 443 aa15.11■□□□□ 0.01
PITRM1-209ENST00000464395 MROH1Q8NDA8 1641 aa15.11■□□□□ 0.01
PITRM1-209ENST00000464395 LRPPRCP42704 1394 aaKnown RBP15.1■□□□□ 0.01
PITRM1-209ENST00000464395 COL17A1Q9UMD9 1497 aaPredicted RBP15.09■□□□□ 0.01
PITRM1-209ENST00000464395 DCAF11Q8TEB1 546 aa15.09■□□□□ 0.01
PITRM1-209ENST00000464395 CARD11Q9BXL7 1154 aa15.09■□□□□ 0.01
PITRM1-209ENST00000464395 TRPM2O94759 1503 aa15.09■□□□□ 0.01
PITRM1-209ENST00000464395 ST20-MTHFSA0A0A6YYL1 179 aa15.09■□□□□ 0.01
PITRM1-209ENST00000464395 TET3O43151 1660 aa15.09■□□□□ 0.01
PITRM1-209ENST00000464395 NEURL4Q96JN8 1562 aa15.08■□□□□ 0.01
PITRM1-209ENST00000464395 PTPRTO14522 1441 aa15.08■□□□□ 0
PITRM1-209ENST00000464395 CLTCL1P53675 1640 aa15.08■□□□□ 0
PITRM1-209ENST00000464395 ZNF326Q5BKZ1 582 aaKnown RBP15.07■□□□□ 0
PITRM1-209ENST00000464395 SMG6Q86US8 1419 aaKnown RBP15.07■□□□□ 0
PITRM1-209ENST00000464395 FAM9BQ8IZU0 186 aa15.06■□□□□ 0
PITRM1-209ENST00000464395 PNISRQ8TF01 805 aaKnown RBP15.06■□□□□ 0
PITRM1-209ENST00000464395 ERICH6BQ5W0A0 696 aa15.06■□□□□ 0
PITRM1-209ENST00000464395 RNF123Q5XPI4 1314 aa15.06■□□□□ 0
PITRM1-209ENST00000464395 KTN1Q86UP2 1357 aaKnown RBP15.06■□□□□ 0
PITRM1-209ENST00000464395 NEFLP07196 543 aa15.05■□□□□ 0
PITRM1-209ENST00000464395 TESK2Q96S53 571 aa15.05■□□□□ 0
PITRM1-209ENST00000464395 NBPF1Q3BBV0 1214 aa15.05■□□□□ -0
PITRM1-209ENST00000464395 WDR7Q9Y4E6 1490 aa15.05■□□□□ -0
PITRM1-209ENST00000464395 IFT172Q9UG01 1749 aa15.05■□□□□ -0
PITRM1-209ENST00000464395 PER1O15534 1290 aaPredicted RBP15.04■□□□□ -0
PITRM1-209ENST00000464395 KDM2AQ9Y2K7 1162 aa15.04■□□□□ -0
PITRM1-209ENST00000464395 PARD3Q8TEW0 1356 aa15.04■□□□□ -0
PITRM1-209ENST00000464395 KIAA1210Q9ULL0 1709 aa15.04■□□□□ -0
PITRM1-209ENST00000464395 ATP7AQ04656 1500 aa15.03■□□□□ -0
PITRM1-209ENST00000464395 KIDINS220Q9ULH0 1771 aa15.02□□□□□ -0.01
PITRM1-209ENST00000464395 EFCAB2Q5VUJ9 269 aa15.02□□□□□ -0.01
PITRM1-209ENST00000464395 MYOM1P52179 1685 aa15.02□□□□□ -0.01
PITRM1-209ENST00000464395 DISP3Q9P2K9 1392 aa15.02□□□□□ -0.01
PITRM1-209ENST00000464395 BRD4O60885 1362 aaPredicted RBP15.01□□□□□ -0.01
PITRM1-209ENST00000464395 ZMYM4Q5VZL5 1548 aa14.98□□□□□ -0.01
PITRM1-209ENST00000464395 IRX6P78412 446 aaPredicted RBP14.98□□□□□ -0.01
PITRM1-209ENST00000464395 FANCAO15360 1455 aa14.98□□□□□ -0.01
PITRM1-209ENST00000464395 MYBBP1AQ9BQG0 1328 aaKnown RBP14.97□□□□□ -0.01
PITRM1-209ENST00000464395 SCAPERQ9BY12 1400 aa14.97□□□□□ -0.01
PITRM1-209ENST00000464395 RBM19Q9Y4C8 960 aaKnown RBP14.97□□□□□ -0.01
PITRM1-209ENST00000464395 MROH2AA6NES4 1674 aa14.97□□□□□ -0.01
PITRM1-209ENST00000464395 RALBP1Q15311 655 aa14.96□□□□□ -0.01
PITRM1-209ENST00000464395 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.96□□□□□ -0.026e-6■■■□□ 19.2
PITRM1-209ENST00000464395 PPRC1Q5VV67 1664 aaKnown RBP14.95□□□□□ -0.02
PITRM1-209ENST00000464395 AFAP1Q8N556 730 aa14.95□□□□□ -0.02
PITRM1-209ENST00000464395 LMTK2Q8IWU2 1503 aa14.95□□□□□ -0.02
PITRM1-209ENST00000464395 INSRP06213 1382 aa14.95□□□□□ -0.02
PITRM1-209ENST00000464395 PPP4R2Q9NY27 417 aa14.94□□□□□ -0.02
PITRM1-209ENST00000464395 RGL3Q3MIN7 710 aa14.94□□□□□ -0.02
PITRM1-209ENST00000464395 EFCAB6Q5THR3 1501 aa14.93□□□□□ -0.02
PITRM1-209ENST00000464395 NUDCQ9Y266 331 aa14.93□□□□□ -0.02
PITRM1-209ENST00000464395 SPAG9O60271 1321 aaKnown RBP14.93□□□□□ -0.02
PITRM1-209ENST00000464395 SYNMO15061 1565 aa14.93□□□□□ -0.02
PITRM1-209ENST00000464395 ABCA6Q8N139 1617 aa14.93□□□□□ -0.02
PITRM1-209ENST00000464395 MAP3K4Q9Y6R4 1608 aa14.93□□□□□ -0.02
PITRM1-209ENST00000464395 FRMPD1Q5SYB0 1578 aa14.92□□□□□ -0.02
PITRM1-209ENST00000464395 KIF1BO60333 1816 aa14.92□□□□□ -0.02
PITRM1-209ENST00000464395 MYO3AQ8NEV4 1616 aa14.92□□□□□ -0.02
PITRM1-209ENST00000464395 NRXN1Q9ULB1 1477 aa14.92□□□□□ -0.02
PITRM1-209ENST00000464395 WASHC2CQ9Y4E1 1318 aa14.92□□□□□ -0.02
PITRM1-209ENST00000464395 BLMP54132 1417 aaPredicted RBP14.92□□□□□ -0.02
PITRM1-209ENST00000464395 ASXL2Q76L83 1435 aa14.92□□□□□ -0.02
PITRM1-209ENST00000464395 ADGRL1O94910 1474 aa14.91□□□□□ -0.02
PITRM1-209ENST00000464395 MYOM2P54296 1465 aa14.91□□□□□ -0.02
PITRM1-209ENST00000464395 UGGT1Q9NYU2 1555 aa14.9□□□□□ -0.02
PITRM1-209ENST00000464395 POLR3GLQ9BT43 218 aa14.9□□□□□ -0.02
PITRM1-209ENST00000464395 ZC3H13Q5T200 1668 aaKnown RBP14.88□□□□□ -0.03
PITRM1-209ENST00000464395 SCAF11Q99590 1463 aaKnown RBP14.88□□□□□ -0.03
PITRM1-209ENST00000464395 PPLO60437 1756 aa14.87□□□□□ -0.03
PITRM1-209ENST00000464395 ADGRB3O60242 1522 aa14.86□□□□□ -0.03
PITRM1-209ENST00000464395 TMC1Q8TDI8 760 aa14.86□□□□□ -0.03
PITRM1-209ENST00000464395 CFAP74Q9C0B2 1584 aa14.86□□□□□ -0.03
PITRM1-209ENST00000464395 NLRP13Q86W25 1043 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms