RNA–Protein interactions for RNA: ENST00000464266.1

HOXB3-203, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-203ENST00000464266 SHROOM4Q9ULL8 1493 aa8.66□□□□□ -1.02
HOXB3-203ENST00000464266 MDM2Q00987 491 aaPredicted RBP8.66□□□□□ -1.02
HOXB3-203ENST00000464266 TMUB1Q9BVT8 246 aa8.66□□□□□ -1.02
HOXB3-203ENST00000464266 CUX2O14529 1486 aa8.65□□□□□ -1.02
HOXB3-203ENST00000464266 SPDYE5A6NIY4 337 aa8.65□□□□□ -1.02
HOXB3-203ENST00000464266 KIF3CO14782 793 aa8.65□□□□□ -1.02
HOXB3-203ENST00000464266 SSTR3P32745 418 aaPredicted RBP8.65□□□□□ -1.02
HOXB3-203ENST00000464266 PRIM1P49642 420 aaKnown RBP8.65□□□□□ -1.02
HOXB3-203ENST00000464266 PROCA1Q8NCQ7 364 aaPredicted RBP8.65□□□□□ -1.02
HOXB3-203ENST00000464266 G3V3G9 751 aa8.64□□□□□ -1.03
HOXB3-203ENST00000464266 BEGAINQ9BUH8 593 aa8.64□□□□□ -1.03
HOXB3-203ENST00000464266 PLSCR2Q9NRY7 297 aa8.64□□□□□ -1.03
HOXB3-203ENST00000464266 POLR3EQ9NVU0 708 aa8.64□□□□□ -1.03
HOXB3-203ENST00000464266 TMCO4Q5TGY1 634 aa8.63□□□□□ -1.03
HOXB3-203ENST00000464266 PIP4P2Q8N4L2 257 aa8.63□□□□□ -1.03
HOXB3-203ENST00000464266 RETREG2Q8NC44 543 aa8.63□□□□□ -1.03
HOXB3-203ENST00000464266 TRIM35Q9UPQ4 493 aa8.63□□□□□ -1.03
HOXB3-203ENST00000464266 COG6Q9Y2V7 657 aa8.63□□□□□ -1.03
HOXB3-203ENST00000464266 ZNF330Q9Y3S2 320 aaPredicted RBP8.63□□□□□ -1.03
HOXB3-203ENST00000464266 EVI5O60447 810 aa8.61□□□□□ -1.03
HOXB3-203ENST00000464266 TMEM121BQ9BXQ6 578 aaPredicted RBP8.61□□□□□ -1.03
HOXB3-203ENST00000464266 BMP2KQ9NSY1 1161 aaPredicted RBP8.61□□□□□ -1.03
HOXB3-203ENST00000464266 BOLA1Q9Y3E2 137 aa8.61□□□□□ -1.03
HOXB3-203ENST00000464266 PDCD7Q8N8D1 485 aaKnown RBP8.6□□□□□ -1.03
HOXB3-203ENST00000464266 BANK1Q8NDB2 785 aa8.6□□□□□ -1.03
HOXB3-203ENST00000464266 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.59□□□□□ -1.03
HOXB3-203ENST00000464266 GZF1Q9H116 711 aaPredicted RBP8.59□□□□□ -1.03
HOXB3-203ENST00000464266 EIF4G1Q04637 1599 aaKnown RBP8.59□□□□□ -1.03
HOXB3-203ENST00000464266 MYSM1Q5VVJ2 828 aa8.58□□□□□ -1.04
HOXB3-203ENST00000464266 RGS22Q8NE09 1264 aa8.58□□□□□ -1.04
HOXB3-203ENST00000464266 FAM217BQ9NTX9 383 aaPredicted RBP8.58□□□□□ -1.04
HOXB3-203ENST00000464266 PPP1R15AO75807 674 aaPredicted RBP8.57□□□□□ -1.04
HOXB3-203ENST00000464266 CLK2P49760 499 aaKnown RBP8.57□□□□□ -1.04
HOXB3-203ENST00000464266 PDE4CQ08493 712 aa8.57□□□□□ -1.04
HOXB3-203ENST00000464266 WWC1Q8IX03 1113 aa8.57□□□□□ -1.04
HOXB3-203ENST00000464266 PHOX2BQ99453 314 aa8.57□□□□□ -1.04
HOXB3-203ENST00000464266 CDHR5Q9HBB8 845 aa8.57□□□□□ -1.04
HOXB3-203ENST00000464266 NPDC1Q9NQX5 325 aaPredicted RBP8.57□□□□□ -1.04
HOXB3-203ENST00000464266 SNRKQ9NRH2 765 aa8.57□□□□□ -1.04
HOXB3-203ENST00000464266 ACIN1Q9UKV3 1341 aaKnown RBP8.56□□□□□ -1.04
HOXB3-203ENST00000464266 MAP3K7O43318 606 aa8.56□□□□□ -1.04
HOXB3-203ENST00000464266 RFC5P40937 340 aa8.56□□□□□ -1.04
HOXB3-203ENST00000464266 MFAP1P55081 439 aaKnown RBP8.56□□□□□ -1.04
HOXB3-203ENST00000464266 CHRDL2Q6WN34 429 aa8.56□□□□□ -1.04
HOXB3-203ENST00000464266 MTMR7Q9Y216 660 aa8.56□□□□□ -1.04
HOXB3-203ENST00000464266 EN1Q05925 392 aaPredicted RBP8.55□□□□□ -1.04
HOXB3-203ENST00000464266 IRF5Q13568 498 aa8.55□□□□□ -1.04
HOXB3-203ENST00000464266 TMEM259Q4ZIN3 620 aa8.55□□□□□ -1.04
HOXB3-203ENST00000464266 EPAS1Q99814 870 aa8.54□□□□□ -1.04
HOXB3-203ENST00000464266 OATP04181 439 aa8.53□□□□□ -1.04
HOXB3-203ENST00000464266 DIXDC1Q155Q3 683 aa8.53□□□□□ -1.04
HOXB3-203ENST00000464266 FBXW7Q969H0 707 aa8.53□□□□□ -1.04
HOXB3-203ENST00000464266 CALR3Q96L12 384 aaKnown RBP8.53□□□□□ -1.04
HOXB3-203ENST00000464266 OCEL1Q9H607 264 aa8.53□□□□□ -1.04
HOXB3-203ENST00000464266 GDPD2Q9HCC8 539 aa8.52□□□□□ -1.05
HOXB3-203ENST00000464266 MYO15BQ96JP2 1530 aa8.51□□□□□ -1.05
HOXB3-203ENST00000464266 PATL2C9JE40 543 aaKnown RBP8.51□□□□□ -1.05
HOXB3-203ENST00000464266 PHF14O94880 888 aa8.51□□□□□ -1.05
HOXB3-203ENST00000464266 IRX5P78411 483 aaPredicted RBP8.51□□□□□ -1.05
HOXB3-203ENST00000464266 METTL3Q86U44 580 aaKnown RBP8.51□□□□□ -1.05
HOXB3-203ENST00000464266 RBM33Q96EV2 1170 aaKnown RBP8.51□□□□□ -1.05
HOXB3-203ENST00000464266 TBC1D2Q9BYX2 928 aa8.51□□□□□ -1.05
HOXB3-203ENST00000464266 PRM3Q9NNZ6 103 aa8.51□□□□□ -1.05
HOXB3-203ENST00000464266 NLRP7Q8WX94 980 aa8.5□□□□□ -1.05
HOXB3-203ENST00000464266 ANO8Q9HCE9 1232 aaPredicted RBP8.5□□□□□ -1.05
HOXB3-203ENST00000464266 RBM25P49756 843 aaKnown RBP8.49□□□□□ -1.05
HOXB3-203ENST00000464266 FAM161AQ3B820 660 aa8.49□□□□□ -1.05
HOXB3-203ENST00000464266 FOXD4L5Q5VV16 416 aaPredicted RBP8.49□□□□□ -1.05
HOXB3-203ENST00000464266 TMEM92Q6UXU6 159 aa8.49□□□□□ -1.05
HOXB3-203ENST00000464266 FOXD4L4Q8WXT5 416 aaPredicted RBP8.49□□□□□ -1.05
HOXB3-203ENST00000464266 L3MBTL3Q96JM7 780 aaPredicted RBP8.49□□□□□ -1.05
HOXB3-203ENST00000464266 ABL2P42684 1182 aa8.48□□□□□ -1.05
HOXB3-203ENST00000464266 PPP2R2DQ66LE6 453 aa8.48□□□□□ -1.05
HOXB3-203ENST00000464266 MTMR14Q8NCE2 650 aa8.48□□□□□ -1.05
HOXB3-203ENST00000464266 PTCD2Q8WV60 388 aaKnown RBP8.48□□□□□ -1.05
HOXB3-203ENST00000464266 TSR1Q2NL82 804 aaKnown RBP8.47□□□□□ -1.05
HOXB3-203ENST00000464266 PXYLP1Q8TE99 480 aa8.47□□□□□ -1.05
HOXB3-203ENST00000464266 GLMNQ92990 594 aa8.47□□□□□ -1.05
HOXB3-203ENST00000464266 PLCG2P16885 1265 aa8.46□□□□□ -1.06
HOXB3-203ENST00000464266 IER5LQ5T953 404 aa8.46□□□□□ -1.06
HOXB3-203ENST00000464266 SLAIN1Q8ND83 568 aa8.46□□□□□ -1.06
HOXB3-203ENST00000464266 LIMD1Q9UGP4 676 aa8.46□□□□□ -1.06
HOXB3-203ENST00000464266 C19orf67A6NJJ6 358 aa8.45□□□□□ -1.06
HOXB3-203ENST00000464266 FBXO31Q5XUX0 539 aaPredicted RBP8.45□□□□□ -1.06
HOXB3-203ENST00000464266 TYW1BQ6NUM6 668 aa8.45□□□□□ -1.06
HOXB3-203ENST00000464266 RIC3Q7Z5B4 369 aa8.45□□□□□ -1.06
HOXB3-203ENST00000464266 POM121CA8CG34 1229 aa8.44□□□□□ -1.06
HOXB3-203ENST00000464266 GALR2O43603 387 aaPredicted RBP8.44□□□□□ -1.06
HOXB3-203ENST00000464266 ATN1P54259 1190 aaPredicted RBP8.44□□□□□ -1.06
HOXB3-203ENST00000464266 KCNA1Q09470 495 aa8.44□□□□□ -1.06
HOXB3-203ENST00000464266 PCDHGA10Q9Y5H3 936 aa8.44□□□□□ -1.06
HOXB3-203ENST00000464266 ADGRG1Q9Y653 693 aa8.44□□□□□ -1.06
HOXB3-203ENST00000464266 SOCS7O14512 581 aa8.43□□□□□ -1.06
HOXB3-203ENST00000464266 PADI6Q6TGC4 694 aa8.43□□□□□ -1.06
HOXB3-203ENST00000464266 CERKQ8TCT0 537 aa8.43□□□□□ -1.06
HOXB3-203ENST00000464266 PBXIP1Q96AQ6 731 aa8.43□□□□□ -1.06
HOXB3-203ENST00000464266 BRD1O95696 1058 aa8.42□□□□□ -1.06
HOXB3-203ENST00000464266 ZNF428Q96B54 188 aa8.42□□□□□ -1.06
HOXB3-203ENST00000464266 TBC1D2BQ9UPU7 963 aa8.42□□□□□ -1.06
HOXB3-203ENST00000464266 CSB-PGBD3P0DP91 1061 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms