RNA–Protein interactions for RNA: ENST00000464138.1

SSR3-203, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3

Gene SSR3, Length 533 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-203ENST00000464138 FOSBP53539 338 aa11.66□□□□□ -0.54
SSR3-203ENST00000464138 RBM33Q96EV2 1170 aaKnown RBP11.66□□□□□ -0.54
SSR3-203ENST00000464138 GTF3C3Q9Y5Q9 886 aa11.66□□□□□ -0.54
SSR3-203ENST00000464138 ARSIQ5FYB1 569 aa11.65□□□□□ -0.54
SSR3-203ENST00000464138 CERKQ8TCT0 537 aa11.65□□□□□ -0.54
SSR3-203ENST00000464138 NUDT7P0C024 238 aa11.64□□□□□ -0.55
SSR3-203ENST00000464138 GPR153Q6NV75 609 aa11.64□□□□□ -0.55
SSR3-203ENST00000464138 ZDHHC16Q969W1 377 aa11.64□□□□□ -0.55
SSR3-203ENST00000464138 AMHR2Q16671 573 aa11.63□□□□□ -0.55
SSR3-203ENST00000464138 ZNF454Q8N9F8 522 aa11.63□□□□□ -0.55
SSR3-203ENST00000464138 KDM4CQ9H3R0 1056 aa11.63□□□□□ -0.55
SSR3-203ENST00000464138 NPDC1Q9NQX5 325 aaPredicted RBP11.63□□□□□ -0.55
SSR3-203ENST00000464138 PSDA5PKW4 1024 aaPredicted RBP11.62□□□□□ -0.55
SSR3-203ENST00000464138 FECHP22830 423 aa11.62□□□□□ -0.55
SSR3-203ENST00000464138 CDHR5Q9HBB8 845 aa11.62□□□□□ -0.55
SSR3-203ENST00000464138 GPBP1L1Q9HC44 474 aaPredicted RBP11.62□□□□□ -0.55
SSR3-203ENST00000464138 TSR1Q2NL82 804 aaKnown RBP11.61□□□□□ -0.55
SSR3-203ENST00000464138 ERICH6Q7L0X2 663 aa11.61□□□□□ -0.55
SSR3-203ENST00000464138 C6orf132Q5T0Z8 1188 aa11.6□□□□□ -0.55
SSR3-203ENST00000464138 KHSRPQ92945 711 aaKnown RBP eCLIP11.59□□□□□ -0.55
SSR3-203ENST00000464138 MYO15BQ96JP2 1530 aa11.59□□□□□ -0.55
SSR3-203ENST00000464138 BICRAQ9NZM4 1560 aa11.58□□□□□ -0.55
SSR3-203ENST00000464138 PPP4R3BQ5MIZ7 849 aa11.57□□□□□ -0.56
SSR3-203ENST00000464138 RBM27Q9P2N5 1060 aaKnown RBP11.57□□□□□ -0.56
SSR3-203ENST00000464138 LHX6Q9UPM6 363 aa11.55□□□□□ -0.56
SSR3-203ENST00000464138 TTLL12Q14166 644 aaPredicted RBP11.54□□□□□ -0.56
SSR3-203ENST00000464138 PARP9Q8IXQ6 854 aa11.54□□□□□ -0.56
SSR3-203ENST00000464138 OATP04181 439 aa11.53□□□□□ -0.56
SSR3-203ENST00000464138 HOXB1P14653 301 aaPredicted RBP11.53□□□□□ -0.56
SSR3-203ENST00000464138 IL27Q8NEV9 243 aa11.53□□□□□ -0.56
SSR3-203ENST00000464138 DDRGK1Q96HY6 314 aa11.53□□□□□ -0.56
SSR3-203ENST00000464138 ADAM33Q9BZ11 813 aa11.53□□□□□ -0.56
SSR3-203ENST00000464138 CLCN1P35523 988 aa11.5□□□□□ -0.57
SSR3-203ENST00000464138 BCL2L12Q9HB09 334 aa11.5□□□□□ -0.57
SSR3-203ENST00000464138 PRSS12P56730 875 aa11.49□□□□□ -0.57
SSR3-203ENST00000464138 PADI6Q6TGC4 694 aa11.49□□□□□ -0.57
SSR3-203ENST00000464138 TTC13Q8NBP0 860 aa11.49□□□□□ -0.57
SSR3-203ENST00000464138 SHROOM4Q9ULL8 1493 aa11.48□□□□□ -0.57
SSR3-203ENST00000464138 PTPREP23469 700 aa11.47□□□□□ -0.57
SSR3-203ENST00000464138 OTUD5Q96G74 571 aa11.47□□□□□ -0.57
SSR3-203ENST00000464138 FAM117AQ9C073 453 aa11.47□□□□□ -0.57
SSR3-203ENST00000464138 GIGYF2Q6Y7W6 1299 aaKnown RBP11.46□□□□□ -0.57
SSR3-203ENST00000464138 METTL3Q86U44 580 aaKnown RBP11.46□□□□□ -0.57
SSR3-203ENST00000464138 CDCA7LQ96GN5 454 aa11.46□□□□□ -0.57
SSR3-203ENST00000464138 GPCPD1Q9NPB8 672 aa11.46□□□□□ -0.57
SSR3-203ENST00000464138 ADGRG1Q9Y653 693 aa11.46□□□□□ -0.57
SSR3-203ENST00000464138 PPP1R3GB7ZBB8 358 aa11.45□□□□□ -0.58
SSR3-203ENST00000464138 RBM46Q8TBY0 533 aaKnown RBP11.44□□□□□ -0.58
SSR3-203ENST00000464138 KCNH8Q96L42 1107 aa11.44□□□□□ -0.58
SSR3-203ENST00000464138 PXYLP1Q8TE99 480 aa11.43□□□□□ -0.58
SSR3-203ENST00000464138 CC2D2AQ9P2K1 1620 aa11.42□□□□□ -0.58
SSR3-203ENST00000464138 MDM2Q00987 491 aaPredicted RBP11.42□□□□□ -0.58
SSR3-203ENST00000464138 LHX8Q68G74 356 aa11.42□□□□□ -0.58
SSR3-203ENST00000464138 PHOX2BQ99453 314 aa11.42□□□□□ -0.58
SSR3-203ENST00000464138 TMUB1Q9BVT8 246 aa11.42□□□□□ -0.58
SSR3-203ENST00000464138 CECR2Q9BXF3 1484 aa11.42□□□□□ -0.58
SSR3-203ENST00000464138 PLEKHG3A1L390 1219 aa11.4□□□□□ -0.58
SSR3-203ENST00000464138 COL9A1P20849 921 aa11.4□□□□□ -0.58
SSR3-203ENST00000464138 TIMELESSQ9UNS1 1208 aa11.4□□□□□ -0.58
SSR3-203ENST00000464138 FAM161AQ3B820 660 aa11.39□□□□□ -0.59
SSR3-203ENST00000464138 GOPCQ9HD26 462 aa11.39□□□□□ -0.59
SSR3-203ENST00000464138 MS4A1P11836 297 aa11.38□□□□□ -0.59
SSR3-203ENST00000464138 REPIN1Q9BWE0 567 aaKnown RBP11.38□□□□□ -0.59
SSR3-203ENST00000464138 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.37□□□□□ -0.59
SSR3-203ENST00000464138 ONECUT3O60422 494 aaPredicted RBP11.37□□□□□ -0.59
SSR3-203ENST00000464138 SSTR3P32745 418 aaPredicted RBP11.37□□□□□ -0.59
SSR3-203ENST00000464138 PACS2Q86VP3 889 aa11.37□□□□□ -0.59
SSR3-203ENST00000464138 NBPF26B4DH59 902 aa11.36□□□□□ -0.59
SSR3-203ENST00000464138 C14orf37Q86TY3 774 aa11.36□□□□□ -0.59
SSR3-203ENST00000464138 FAM217BQ9NTX9 383 aaPredicted RBP11.36□□□□□ -0.59
SSR3-203ENST00000464138 TRIM6-TRIM34B2RNG4 842 aa11.35□□□□□ -0.59
SSR3-203ENST00000464138 KCNK17Q96T54 332 aa11.35□□□□□ -0.59
SSR3-203ENST00000464138 RSPH6AQ9H0K4 717 aa11.34□□□□□ -0.59
SSR3-203ENST00000464138 TSKSQ9UJT2 592 aa11.34□□□□□ -0.59
SSR3-203ENST00000464138 ERBB3P21860 1342 aa11.34□□□□□ -0.59
SSR3-203ENST00000464138 EYA1Q99502 592 aa11.33□□□□□ -0.6
SSR3-203ENST00000464138 FAM198AQ9UFP1 575 aa11.33□□□□□ -0.6
SSR3-203ENST00000464138 EIF4G1Q04637 1599 aaKnown RBP11.33□□□□□ -0.6
SSR3-203ENST00000464138 RCCD1A6NED2 376 aa11.31□□□□□ -0.6
SSR3-203ENST00000464138 NUDT18Q6ZVK8 323 aa11.31□□□□□ -0.6
SSR3-203ENST00000464138 TATDN2Q93075 761 aa11.31□□□□□ -0.6
SSR3-203ENST00000464138 DCAF1Q9Y4B6 1507 aa11.3□□□□□ -0.6
SSR3-203ENST00000464138 DNAJB2P25686 324 aa11.3□□□□□ -0.6
SSR3-203ENST00000464138 PCMTD1Q96MG8 357 aaPredicted RBP11.3□□□□□ -0.6
SSR3-203ENST00000464138 BEGAINQ9BUH8 593 aa11.3□□□□□ -0.6
SSR3-203ENST00000464138 PNMA3Q9UL41 463 aa11.3□□□□□ -0.6
SSR3-203ENST00000464138 ARHGAP33O14559 1287 aa11.29□□□□□ -0.6
SSR3-203ENST00000464138 DIXDC1Q155Q3 683 aa11.29□□□□□ -0.6
SSR3-203ENST00000464138 SH3D19Q5HYK7 790 aa11.29□□□□□ -0.6
SSR3-203ENST00000464138 VARS2Q5ST30 1063 aaKnown RBP11.29□□□□□ -0.6
SSR3-203ENST00000464138 SULF1Q8IWU6 871 aa11.29□□□□□ -0.6
SSR3-203ENST00000464138 NLRP7Q8WX94 980 aa11.29□□□□□ -0.6
SSR3-203ENST00000464138 PBX2P40425 430 aa11.28□□□□□ -0.6
SSR3-203ENST00000464138 ST18O60284 1047 aa11.27□□□□□ -0.61
SSR3-203ENST00000464138 EMP3P54852 163 aa11.27□□□□□ -0.61
SSR3-203ENST00000464138 ZBED2Q9BTP6 218 aa11.27□□□□□ -0.61
SSR3-203ENST00000464138 SLC4A5Q9BY07 1137 aa11.27□□□□□ -0.61
SSR3-203ENST00000464138 PROX2Q3B8N5 592 aa11.26□□□□□ -0.61
SSR3-203ENST00000464138 SKIV2LQ15477 1246 aaKnown RBP11.25□□□□□ -0.61
SSR3-203ENST00000464138 TMEM134Q9H6X4 195 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms