RNA–Protein interactions for RNA: ENST00000464045.1

THUMPD3-208, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-208ENST00000464045 GGT6Q6P531 493 aa11.48□□□□□ -0.57
THUMPD3-208ENST00000464045 NPATQ14207 1427 aa11.48□□□□□ -0.57
THUMPD3-208ENST00000464045 UHRF1BP1Q6BDS2 1440 aa11.48□□□□□ -0.57
THUMPD3-208ENST00000464045 STRCQ7RTU9 1775 aa11.47□□□□□ -0.57
THUMPD3-208ENST00000464045 CROCC2H7BZ55 1655 aa11.47□□□□□ -0.57
THUMPD3-208ENST00000464045 DUOX2Q9NRD8 1548 aa11.47□□□□□ -0.57
THUMPD3-208ENST00000464045 ZMYM3Q14202 1370 aa11.47□□□□□ -0.57
THUMPD3-208ENST00000464045 KIF3BO15066 747 aa11.47□□□□□ -0.57
THUMPD3-208ENST00000464045 C3P01024 1663 aa11.46□□□□□ -0.57
THUMPD3-208ENST00000464045 EIF2AK4Q9P2K8 1649 aaKnown RBP11.46□□□□□ -0.57
THUMPD3-208ENST00000464045 KIF15Q9NS87 1388 aa11.46□□□□□ -0.57
THUMPD3-208ENST00000464045 SETD1BQ9UPS6 1966 aaKnown RBP11.46□□□□□ -0.58
THUMPD3-208ENST00000464045 KDM5DQ9BY66 1539 aa11.45□□□□□ -0.58
THUMPD3-208ENST00000464045 ERBINQ96RT1 1412 aa11.45□□□□□ -0.58
THUMPD3-208ENST00000464045 ANKRD30AQ9BXX3 1397 aa11.45□□□□□ -0.58
THUMPD3-208ENST00000464045 RNF17Q9BXT8 1623 aaKnown RBP11.45□□□□□ -0.58
THUMPD3-208ENST00000464045 ADGRL2O95490 1459 aa11.44□□□□□ -0.58
THUMPD3-208ENST00000464045 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.44□□□□□ -0.58
THUMPD3-208ENST00000464045 FAM50AQ14320 339 aaKnown RBP11.44□□□□□ -0.58
THUMPD3-208ENST00000464045 CLTCQ00610 1675 aaKnown RBP11.43□□□□□ -0.58
THUMPD3-208ENST00000464045 WASHC2CQ9Y4E1 1318 aa11.43□□□□□ -0.58
THUMPD3-208ENST00000464045 NCOA1Q15788 1441 aa11.43□□□□□ -0.58
THUMPD3-208ENST00000464045 RRP7BPQ9NSQ0 103 aa11.42□□□□□ -0.58
THUMPD3-208ENST00000464045 DMRT2Q9Y5R5 561 aa11.42□□□□□ -0.58
THUMPD3-208ENST00000464045 PTPRKQ15262 1439 aa11.42□□□□□ -0.58
THUMPD3-208ENST00000464045 DISP3Q9P2K9 1392 aa11.41□□□□□ -0.58
THUMPD3-208ENST00000464045 PZPP20742 1482 aa11.41□□□□□ -0.58
THUMPD3-208ENST00000464045 ZC3H13Q5T200 1668 aaKnown RBP11.4□□□□□ -0.58
THUMPD3-208ENST00000464045 ADRA2BP18089 450 aa11.4□□□□□ -0.58
THUMPD3-208ENST00000464045 ILDR2Q71H61 639 aa11.4□□□□□ -0.58
THUMPD3-208ENST00000464045 ROCK1Q13464 1354 aa11.4□□□□□ -0.59
THUMPD3-208ENST00000464045 ABCC3O15438 1527 aa11.4□□□□□ -0.59
THUMPD3-208ENST00000464045 PRDM15P57071 1507 aaPredicted RBP11.4□□□□□ -0.59
THUMPD3-208ENST00000464045 NCKAP5LQ9HCH0 1330 aa11.39□□□□□ -0.59
THUMPD3-208ENST00000464045 MROH1Q8NDA8 1641 aa11.39□□□□□ -0.59
THUMPD3-208ENST00000464045 CHIC2Q9UKJ5 165 aa11.39□□□□□ -0.59
THUMPD3-208ENST00000464045 RRBP1Q9P2E9 1410 aaKnown RBP11.37□□□□□ -0.59
THUMPD3-208ENST00000464045 DEPDC5O75140 1603 aa11.37□□□□□ -0.59
THUMPD3-208ENST00000464045 KANK1Q14678 1352 aa11.37□□□□□ -0.59
THUMPD3-208ENST00000464045 ARHGAP31Q2M1Z3 1444 aa11.36□□□□□ -0.59
THUMPD3-208ENST00000464045 ANKRD50Q9ULJ7 1429 aa11.36□□□□□ -0.59
THUMPD3-208ENST00000464045 CAMSAP1Q5T5Y3 1602 aa11.36□□□□□ -0.59
THUMPD3-208ENST00000464045 PPARGC1BQ86YN6 1023 aaKnown RBP11.36□□□□□ -0.59
THUMPD3-208ENST00000464045 TNRQ92752 1358 aa11.36□□□□□ -0.59
THUMPD3-208ENST00000464045 ZNF142P52746 1687 aaPredicted RBP11.36□□□□□ -0.59
THUMPD3-208ENST00000464045 PTPRTO14522 1441 aa11.35□□□□□ -0.59
THUMPD3-208ENST00000464045 MYO3AQ8NEV4 1616 aa11.35□□□□□ -0.59
THUMPD3-208ENST00000464045 LMTK2Q8IWU2 1503 aa11.35□□□□□ -0.59
THUMPD3-208ENST00000464045 ZNF335Q9H4Z2 1342 aaPredicted RBP11.35□□□□□ -0.59
THUMPD3-208ENST00000464045 VWDEQ8N2E2 1590 aa11.34□□□□□ -0.59
THUMPD3-208ENST00000464045 CEP170BQ9Y4F5 1589 aaPredicted RBP11.34□□□□□ -0.59
THUMPD3-208ENST00000464045 A2ML1A8K2U0 1454 aa11.34□□□□□ -0.59
THUMPD3-208ENST00000464045 NLRP1Q9C000 1473 aa11.34□□□□□ -0.59
THUMPD3-208ENST00000464045 SPATA31D1Q6ZQQ2 1576 aa11.33□□□□□ -0.6
THUMPD3-208ENST00000464045 PLA2R1Q13018 1463 aa11.33□□□□□ -0.6
THUMPD3-208ENST00000464045 FBXO31Q5XUX0 539 aaPredicted RBP11.33□□□□□ -0.6
THUMPD3-208ENST00000464045 LTBP4Q8N2S1 1624 aa11.33□□□□□ -0.6
THUMPD3-208ENST00000464045 ERVK-7P63135 1459 aa11.32□□□□□ -0.6
THUMPD3-208ENST00000464045 UBAP1LF5GYI3 381 aa11.31□□□□□ -0.6
THUMPD3-208ENST00000464045 PKD2Q13563 968 aa11.31□□□□□ -0.6
THUMPD3-208ENST00000464045 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.31□□□□□ -0.6
THUMPD3-208ENST00000464045 CEP152O94986 1710 aa11.3□□□□□ -0.6
THUMPD3-208ENST00000464045 SCAF1Q9H7N4 1312 aaKnown RBP11.3□□□□□ -0.6
THUMPD3-208ENST00000464045 ITGAEP38570 1179 aa11.29□□□□□ -0.6
THUMPD3-208ENST00000464045 RPRD2Q5VT52 1461 aaKnown RBP11.29□□□□□ -0.6
THUMPD3-208ENST00000464045 EFCAB6Q5THR3 1501 aa11.29□□□□□ -0.6
THUMPD3-208ENST00000464045 UNC13BO14795 1591 aa11.28□□□□□ -0.6
THUMPD3-208ENST00000464045 THEMISQ8N1K5 641 aaPredicted RBP11.28□□□□□ -0.6
THUMPD3-208ENST00000464045 UGGT1Q9NYU2 1555 aa11.27□□□□□ -0.61
THUMPD3-208ENST00000464045 SOCS7O14512 581 aa11.26□□□□□ -0.61
THUMPD3-208ENST00000464045 PIP4K2BP78356 416 aa11.26□□□□□ -0.61
THUMPD3-208ENST00000464045 NOS1P29475 1434 aa11.26□□□□□ -0.61
THUMPD3-208ENST00000464045 TET3O43151 1660 aa11.24□□□□□ -0.61
THUMPD3-208ENST00000464045 ANKLE2Q86XL3 938 aa11.24□□□□□ -0.61
THUMPD3-208ENST00000464045 HFM1A2PYH4 1435 aa11.24□□□□□ -0.61
THUMPD3-208ENST00000464045 NAIPQ13075 1403 aa11.24□□□□□ -0.61
THUMPD3-208ENST00000464045 IQGAP3Q86VI3 1631 aa11.24□□□□□ -0.61
THUMPD3-208ENST00000464045 SLC52A1Q9NWF4 448 aa11.23□□□□□ -0.61
THUMPD3-208ENST00000464045 NUP155O75694 1391 aa11.23□□□□□ -0.61
THUMPD3-208ENST00000464045 MED14O60244 1454 aa11.22□□□□□ -0.61
THUMPD3-208ENST00000464045 GCC2Q8IWJ2 1684 aa11.22□□□□□ -0.61
THUMPD3-208ENST00000464045 KDM5AP29375 1690 aaKnown RBP11.21□□□□□ -0.61
THUMPD3-208ENST00000464045 SYNMO15061 1565 aa11.21□□□□□ -0.61
THUMPD3-208ENST00000464045 CFAP65Q6ZU64 1925 aaKnown RBP11.21□□□□□ -0.62
THUMPD3-208ENST00000464045 UBR1Q8IWV7 1749 aa11.21□□□□□ -0.62
THUMPD3-208ENST00000464045 SLIT1O75093 1534 aa11.2□□□□□ -0.62
THUMPD3-208ENST00000464045 IQSEC2Q5JU85 1478 aa11.2□□□□□ -0.62
THUMPD3-208ENST00000464045 ARHGAP23Q9P227 1491 aa11.2□□□□□ -0.62
THUMPD3-208ENST00000464045 HSPA1LP34931 641 aa11.2□□□□□ -0.62
THUMPD3-208ENST00000464045 IDI1Q13907 227 aa11.2□□□□□ -0.62
THUMPD3-208ENST00000464045 POLR1AO95602 1720 aaPredicted RBP11.2□□□□□ -0.62
THUMPD3-208ENST00000464045 NEURL4Q96JN8 1562 aa11.2□□□□□ -0.62
THUMPD3-208ENST00000464045 NPHP4O75161 1426 aaPredicted RBP11.18□□□□□ -0.62
THUMPD3-208ENST00000464045 TMEM2Q9UHN6 1383 aa11.18□□□□□ -0.62
THUMPD3-208ENST00000464045 ACIN1Q9UKV3 1341 aaKnown RBP11.18□□□□□ -0.62
THUMPD3-208ENST00000464045 PIK3C2BO00750 1634 aa11.18□□□□□ -0.62
THUMPD3-208ENST00000464045 STAG3Q9UJ98 1225 aa11.18□□□□□ -0.62
THUMPD3-208ENST00000464045 ADGRB3O60242 1522 aa11.18□□□□□ -0.62
THUMPD3-208ENST00000464045 SCAF11Q99590 1463 aaKnown RBP11.18□□□□□ -0.62
THUMPD3-208ENST00000464045 EID1Q9Y6B2 187 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms