RNA–Protein interactions for RNA: ENST00000463688.6

COMMD3-205, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,407 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-205ENST00000463688 C3P01024 1663 aa20.62■□□□□ 0.89
COMMD3-205ENST00000463688 PTPN23Q9H3S7 1636 aa20.62■□□□□ 0.89
COMMD3-205ENST00000463688 FAM50AQ14320 339 aaKnown RBP20.61■□□□□ 0.89
COMMD3-205ENST00000463688 ABCC5O15440 1437 aa20.61■□□□□ 0.89
COMMD3-205ENST00000463688 PTPRKQ15262 1439 aa20.61■□□□□ 0.89
COMMD3-205ENST00000463688 ERBINQ96RT1 1412 aa20.61■□□□□ 0.89
COMMD3-205ENST00000463688 KANK1Q14678 1352 aa20.61■□□□□ 0.89
COMMD3-205ENST00000463688 DAPK1P53355 1430 aa20.61■□□□□ 0.89
COMMD3-205ENST00000463688 PKD2Q13563 968 aa20.61■□□□□ 0.89
COMMD3-205ENST00000463688 RRP7BPQ9NSQ0 103 aa20.6■□□□□ 0.89
COMMD3-205ENST00000463688 PZPP20742 1482 aa20.57■□□□□ 0.88
COMMD3-205ENST00000463688 TNRQ92752 1358 aa20.57■□□□□ 0.88
COMMD3-205ENST00000463688 PTPRTO14522 1441 aa20.57■□□□□ 0.88
COMMD3-205ENST00000463688 EIF2AK4Q9P2K8 1649 aaKnown RBP20.56■□□□□ 0.88
COMMD3-205ENST00000463688 THEMISQ8N1K5 641 aaPredicted RBP20.56■□□□□ 0.88
COMMD3-205ENST00000463688 CLTCQ00610 1675 aaKnown RBP20.55■□□□□ 0.88
COMMD3-205ENST00000463688 FBXO41Q8TF61 875 aa20.55■□□□□ 0.88
COMMD3-205ENST00000463688 DNMT1P26358 1616 aaKnown RBP20.53■□□□□ 0.88
COMMD3-205ENST00000463688 PLA2R1Q13018 1463 aa20.53■□□□□ 0.88
COMMD3-205ENST00000463688 NCOA1Q15788 1441 aa20.53■□□□□ 0.88
COMMD3-205ENST00000463688 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.53■□□□□ 0.88
COMMD3-205ENST00000463688 NLRP1Q9C000 1473 aa20.52■□□□□ 0.88
COMMD3-205ENST00000463688 CHIC2Q9UKJ5 165 aa20.52■□□□□ 0.87
COMMD3-205ENST00000463688 A2ML1A8K2U0 1454 aa20.51■□□□□ 0.87
COMMD3-205ENST00000463688 RNF17Q9BXT8 1623 aaKnown RBP20.51■□□□□ 0.87
COMMD3-205ENST00000463688 ILDR1Q86SU0 546 aaPredicted RBP20.5■□□□□ 0.87
COMMD3-205ENST00000463688 FBXO31Q5XUX0 539 aaPredicted RBP20.48■□□□□ 0.87
COMMD3-205ENST00000463688 ANKLE2Q86XL3 938 aa20.48■□□□□ 0.87
COMMD3-205ENST00000463688 CERKQ8TCT0 537 aa20.48■□□□□ 0.87
COMMD3-205ENST00000463688 ADGRL2O95490 1459 aa20.48■□□□□ 0.87
COMMD3-205ENST00000463688 ZC3H13Q5T200 1668 aaKnown RBP20.48■□□□□ 0.87
COMMD3-205ENST00000463688 ARHGAP31Q2M1Z3 1444 aa20.48■□□□□ 0.87
COMMD3-205ENST00000463688 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.47■□□□□ 0.87
COMMD3-205ENST00000463688 ABCC3O15438 1527 aa20.47■□□□□ 0.87
COMMD3-205ENST00000463688 CEP170BQ9Y4F5 1589 aaPredicted RBP20.46■□□□□ 0.87
COMMD3-205ENST00000463688 ROCK1Q13464 1354 aa20.46■□□□□ 0.87
COMMD3-205ENST00000463688 ANKRD50Q9ULJ7 1429 aa20.45■□□□□ 0.86
COMMD3-205ENST00000463688 CAMSAP1Q5T5Y3 1602 aa20.44■□□□□ 0.86
COMMD3-205ENST00000463688 CROCC2H7BZ55 1655 aa20.44■□□□□ 0.86
COMMD3-205ENST00000463688 MYO3AQ8NEV4 1616 aa20.42■□□□□ 0.86
COMMD3-205ENST00000463688 PRDM15P57071 1507 aaPredicted RBP20.41■□□□□ 0.86
COMMD3-205ENST00000463688 ZNF142P52746 1687 aaPredicted RBP20.41■□□□□ 0.86
COMMD3-205ENST00000463688 NCKAP5LQ9HCH0 1330 aa20.41■□□□□ 0.86
COMMD3-205ENST00000463688 SLC52A1Q9NWF4 448 aa20.39■□□□□ 0.85
COMMD3-205ENST00000463688 STAG3Q9UJ98 1225 aa20.39■□□□□ 0.85
COMMD3-205ENST00000463688 ERVK-7P63135 1459 aa20.38■□□□□ 0.85
COMMD3-205ENST00000463688 EID1Q9Y6B2 187 aa20.37■□□□□ 0.85
COMMD3-205ENST00000463688 LMTK2Q8IWU2 1503 aa20.37■□□□□ 0.85
COMMD3-205ENST00000463688 SPATA31D1Q6ZQQ2 1576 aa20.37■□□□□ 0.85
COMMD3-205ENST00000463688 UGGT1Q9NYU2 1555 aa20.36■□□□□ 0.85
COMMD3-205ENST00000463688 HDGFP51858 240 aaKnown RBP20.36■□□□□ 0.85
COMMD3-205ENST00000463688 STRCQ7RTU9 1775 aa20.35■□□□□ 0.85
COMMD3-205ENST00000463688 IQSEC2Q5JU85 1478 aa20.34■□□□□ 0.85
COMMD3-205ENST00000463688 RPRD2Q5VT52 1461 aaKnown RBP20.33■□□□□ 0.85
COMMD3-205ENST00000463688 DEPDC5O75140 1603 aa20.32■□□□□ 0.84
COMMD3-205ENST00000463688 MROH1Q8NDA8 1641 aa20.32■□□□□ 0.84
COMMD3-205ENST00000463688 ITGAEP38570 1179 aa20.32■□□□□ 0.84
COMMD3-205ENST00000463688 ACIN1Q9UKV3 1341 aaKnown RBP20.31■□□□□ 0.84
COMMD3-205ENST00000463688 RRBP1Q9P2E9 1410 aaKnown RBP20.29■□□□□ 0.84
COMMD3-205ENST00000463688 PPARGC1BQ86YN6 1023 aaKnown RBP20.29■□□□□ 0.84
COMMD3-205ENST00000463688 VWDEQ8N2E2 1590 aa20.27■□□□□ 0.84
COMMD3-205ENST00000463688 MED14O60244 1454 aa20.27■□□□□ 0.84
COMMD3-205ENST00000463688 NPHP4O75161 1426 aaPredicted RBP20.26■□□□□ 0.83
COMMD3-205ENST00000463688 TXNDC2Q86VQ3 553 aa20.26■□□□□ 0.83
COMMD3-205ENST00000463688 NUP155O75694 1391 aa20.24■□□□□ 0.83
COMMD3-205ENST00000463688 IDI1Q13907 227 aa20.24■□□□□ 0.83
COMMD3-205ENST00000463688 EFCAB6Q5THR3 1501 aa20.24■□□□□ 0.83
COMMD3-205ENST00000463688 NOS1P29475 1434 aa20.23■□□□□ 0.83
COMMD3-205ENST00000463688 ZNF335Q9H4Z2 1342 aaPredicted RBP20.22■□□□□ 0.83
COMMD3-205ENST00000463688 CEP152O94986 1710 aa20.22■□□□□ 0.83
COMMD3-205ENST00000463688 CPS1P31327 1500 aa20.21■□□□□ 0.83
COMMD3-205ENST00000463688 TMEM2Q9UHN6 1383 aa20.21■□□□□ 0.83
COMMD3-205ENST00000463688 SCAF11Q99590 1463 aaKnown RBP20.21■□□□□ 0.83
COMMD3-205ENST00000463688 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.2■□□□□ 0.82
COMMD3-205ENST00000463688 LTBP4Q8N2S1 1624 aa20.19■□□□□ 0.82
COMMD3-205ENST00000463688 SLIT1O75093 1534 aa20.19■□□□□ 0.82
COMMD3-205ENST00000463688 TOM1O60784 492 aa20.19■□□□□ 0.82
COMMD3-205ENST00000463688 ARHGAP23Q9P227 1491 aa20.17■□□□□ 0.82
COMMD3-205ENST00000463688 KDM5AP29375 1690 aaKnown RBP20.17■□□□□ 0.82
COMMD3-205ENST00000463688 UNC13BO14795 1591 aa20.16■□□□□ 0.82
COMMD3-205ENST00000463688 POLR1AO95602 1720 aaPredicted RBP20.16■□□□□ 0.82
COMMD3-205ENST00000463688 TET3O43151 1660 aa20.15■□□□□ 0.82
COMMD3-205ENST00000463688 UBAP1LF5GYI3 381 aa20.15■□□□□ 0.82
COMMD3-205ENST00000463688 PPP1R15AO75807 674 aaPredicted RBP20.15■□□□□ 0.82
COMMD3-205ENST00000463688 BCANQ96GW7 911 aa20.14■□□□□ 0.81
COMMD3-205ENST00000463688 LTKP29376 864 aa20.13■□□□□ 0.81
COMMD3-205ENST00000463688 NEURL4Q96JN8 1562 aa20.12■□□□□ 0.81
COMMD3-205ENST00000463688 HFM1A2PYH4 1435 aa20.12■□□□□ 0.81
COMMD3-205ENST00000463688 UBR1Q8IWV7 1749 aa20.11■□□□□ 0.81
COMMD3-205ENST00000463688 CHGAP10645 457 aaKnown RBP20.1■□□□□ 0.81
COMMD3-205ENST00000463688 TRIM52Q96A61 297 aa20.1■□□□□ 0.81
COMMD3-205ENST00000463688 CFAP65Q6ZU64 1925 aaKnown RBP20.1■□□□□ 0.81
COMMD3-205ENST00000463688 NAIPQ13075 1403 aa20.09■□□□□ 0.81
COMMD3-205ENST00000463688 IQGAP3Q86VI3 1631 aa20.09■□□□□ 0.81
COMMD3-205ENST00000463688 IQGAP1P46940 1657 aa20.09■□□□□ 0.81
COMMD3-205ENST00000463688 ADGRB3O60242 1522 aa20.09■□□□□ 0.81
COMMD3-205ENST00000463688 GCC2Q8IWJ2 1684 aa20.08■□□□□ 0.8
COMMD3-205ENST00000463688 PIK3C2BO00750 1634 aa20.06■□□□□ 0.8
COMMD3-205ENST00000463688 KCNA6P17658 529 aa20.06■□□□□ 0.8
COMMD3-205ENST00000463688 SYNMO15061 1565 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms