RNA–Protein interactions for RNA: ENST00000463672.1

GGA1-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 3

Gene GGA1, Length 367 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-217ENST00000463672 CEP170BQ9Y4F5 1589 aaPredicted RBP22.44■■□□□ 1.18
GGA1-217ENST00000463672 PLA2R1Q13018 1463 aa22.41■■□□□ 1.18
GGA1-217ENST00000463672 KIF3BO15066 747 aa22.39■■□□□ 1.17
GGA1-217ENST00000463672 KANK4Q5T7N3 995 aaPredicted RBP22.39■■□□□ 1.17
GGA1-217ENST00000463672 EIF2AK4Q9P2K8 1649 aaKnown RBP22.39■■□□□ 1.17
GGA1-217ENST00000463672 PZPP20742 1482 aa22.37■■□□□ 1.17
GGA1-217ENST00000463672 RNF17Q9BXT8 1623 aaKnown RBP22.37■■□□□ 1.17
GGA1-217ENST00000463672 ZC3H13Q5T200 1668 aaKnown RBP22.36■■□□□ 1.17
GGA1-217ENST00000463672 APLP2Q06481 763 aa22.36■■□□□ 1.17
GGA1-217ENST00000463672 A2ML1A8K2U0 1454 aa22.34■■□□□ 1.17
GGA1-217ENST00000463672 WASHC2CQ9Y4E1 1318 aa22.33■■□□□ 1.17
GGA1-217ENST00000463672 TCOF1Q13428 1488 aaKnown RBP22.33■■□□□ 1.16
GGA1-217ENST00000463672 CROCC2H7BZ55 1655 aa22.33■■□□□ 1.16
GGA1-217ENST00000463672 DNMT1P26358 1616 aaKnown RBP22.32■■□□□ 1.16
GGA1-217ENST00000463672 LTBP4Q8N2S1 1624 aa22.31■■□□□ 1.16
GGA1-217ENST00000463672 IQSEC2Q5JU85 1478 aa22.31■■□□□ 1.16
GGA1-217ENST00000463672 SHANK2Q9UPX8 1470 aa22.31■■□□□ 1.16
GGA1-217ENST00000463672 PKD2Q13563 968 aa22.31■■□□□ 1.16
GGA1-217ENST00000463672 TNRQ92752 1358 aa22.3■■□□□ 1.16
GGA1-217ENST00000463672 PTPN23Q9H3S7 1636 aa22.3■■□□□ 1.16
GGA1-217ENST00000463672 DUOX2Q9NRD8 1548 aa22.3■■□□□ 1.16
GGA1-217ENST00000463672 POLR1AO95602 1720 aaPredicted RBP22.27■■□□□ 1.16
GGA1-217ENST00000463672 NLRP1Q9C000 1473 aa22.27■■□□□ 1.16
GGA1-217ENST00000463672 ABCC3O15438 1527 aa22.26■■□□□ 1.15
GGA1-217ENST00000463672 NCKAP5LQ9HCH0 1330 aa22.26■■□□□ 1.15
GGA1-217ENST00000463672 MROH1Q8NDA8 1641 aa22.25■■□□□ 1.15
GGA1-217ENST00000463672 FGD6Q6ZV73 1430 aa22.24■■□□□ 1.15
GGA1-217ENST00000463672 FBXO31Q5XUX0 539 aaPredicted RBP22.23■■□□□ 1.15
GGA1-217ENST00000463672 ERBINQ96RT1 1412 aa22.23■■□□□ 1.15
GGA1-217ENST00000463672 ABCC5O15440 1437 aa22.22■■□□□ 1.15
GGA1-217ENST00000463672 PRDM15P57071 1507 aaPredicted RBP22.21■■□□□ 1.15
GGA1-217ENST00000463672 SPATA31D1Q6ZQQ2 1576 aa22.21■■□□□ 1.15
GGA1-217ENST00000463672 KIF15Q9NS87 1388 aa22.21■■□□□ 1.15
GGA1-217ENST00000463672 DAPK1P53355 1430 aa22.21■■□□□ 1.15
GGA1-217ENST00000463672 UGGT1Q9NYU2 1555 aa22.21■■□□□ 1.15
GGA1-217ENST00000463672 CEP152O94986 1710 aa22.2■■□□□ 1.14
GGA1-217ENST00000463672 NEURL4Q96JN8 1562 aa22.18■■□□□ 1.14
GGA1-217ENST00000463672 DEPDC5O75140 1603 aa22.17■■□□□ 1.14
GGA1-217ENST00000463672 ERVK-7P63135 1459 aa22.16■■□□□ 1.14
GGA1-217ENST00000463672 ZNF335Q9H4Z2 1342 aaPredicted RBP22.16■■□□□ 1.14
GGA1-217ENST00000463672 THEMISQ8N1K5 641 aaPredicted RBP22.15■■□□□ 1.14
GGA1-217ENST00000463672 ARHGAP31Q2M1Z3 1444 aa22.13■■□□□ 1.13
GGA1-217ENST00000463672 ANKRD30AQ9BXX3 1397 aa22.12■■□□□ 1.13
GGA1-217ENST00000463672 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.12■■□□□ 1.13
GGA1-217ENST00000463672 MED14O60244 1454 aa22.11■■□□□ 1.13
GGA1-217ENST00000463672 ANKLE2Q86XL3 938 aa22.11■■□□□ 1.13
GGA1-217ENST00000463672 RRP7BPQ9NSQ0 103 aa22.11■■□□□ 1.13
GGA1-217ENST00000463672 CPS1P31327 1500 aa22.1■■□□□ 1.13
GGA1-217ENST00000463672 KANK1Q14678 1352 aa22.09■■□□□ 1.13
GGA1-217ENST00000463672 UBR1Q8IWV7 1749 aa22.08■■□□□ 1.12
GGA1-217ENST00000463672 ADGRL2O95490 1459 aa22.08■■□□□ 1.12
GGA1-217ENST00000463672 IQGAP1P46940 1657 aa22.07■■□□□ 1.12
GGA1-217ENST00000463672 NPHP4O75161 1426 aaPredicted RBP22.06■■□□□ 1.12
GGA1-217ENST00000463672 LMTK2Q8IWU2 1503 aa22.06■■□□□ 1.12
GGA1-217ENST00000463672 VWDEQ8N2E2 1590 aa22.04■■□□□ 1.12
GGA1-217ENST00000463672 CFAP65Q6ZU64 1925 aaKnown RBP22.02■■□□□ 1.12
GGA1-217ENST00000463672 CHIC2Q9UKJ5 165 aa22.02■■□□□ 1.12
GGA1-217ENST00000463672 KDM5AP29375 1690 aaKnown RBP22.01■■□□□ 1.11
GGA1-217ENST00000463672 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22■■□□□ 1.116e-7■■■□□ 15.8
GGA1-217ENST00000463672 SLIT1O75093 1534 aa22■■□□□ 1.11
GGA1-217ENST00000463672 UBAP1LF5GYI3 381 aa21.99■■□□□ 1.11
GGA1-217ENST00000463672 FAM50AQ14320 339 aaKnown RBP21.99■■□□□ 1.11
GGA1-217ENST00000463672 EFCAB6Q5THR3 1501 aa21.99■■□□□ 1.11
GGA1-217ENST00000463672 ARHGAP23Q9P227 1491 aa21.98■■□□□ 1.11
GGA1-217ENST00000463672 PIK3C2BO00750 1634 aa21.98■■□□□ 1.11
GGA1-217ENST00000463672 SCAF11Q99590 1463 aaKnown RBP21.97■■□□□ 1.11
GGA1-217ENST00000463672 SYNMO15061 1565 aa21.96■■□□□ 1.11
GGA1-217ENST00000463672 ANKRD50Q9ULJ7 1429 aa21.95■■□□□ 1.1
GGA1-217ENST00000463672 RPRD2Q5VT52 1461 aaKnown RBP21.93■■□□□ 1.1
GGA1-217ENST00000463672 NOS1P29475 1434 aa21.9■■□□□ 1.1
GGA1-217ENST00000463672 DISP3Q9P2K9 1392 aa21.9■■□□□ 1.1
GGA1-217ENST00000463672 EID1Q9Y6B2 187 aa21.9■■□□□ 1.1
GGA1-217ENST00000463672 TET3O43151 1660 aa21.9■■□□□ 1.1
GGA1-217ENST00000463672 UNC13BO14795 1591 aa21.9■■□□□ 1.1
GGA1-217ENST00000463672 STRCP1A6NGW2 1772 aa21.89■■□□□ 1.1
GGA1-217ENST00000463672 TOM1O60784 492 aa21.89■■□□□ 1.09
GGA1-217ENST00000463672 ADGRB3O60242 1522 aa21.89■■□□□ 1.09
GGA1-217ENST00000463672 TMEM2Q9UHN6 1383 aa21.88■■□□□ 1.09
GGA1-217ENST00000463672 STAG3Q9UJ98 1225 aa21.88■■□□□ 1.09
GGA1-217ENST00000463672 GCC2Q8IWJ2 1684 aa21.88■■□□□ 1.09
GGA1-217ENST00000463672 ROCK1Q13464 1354 aa21.87■■□□□ 1.09
GGA1-217ENST00000463672 TXNDC2Q86VQ3 553 aa21.87■■□□□ 1.09
GGA1-217ENST00000463672 LRRC7Q96NW7 1537 aa21.85■■□□□ 1.09
GGA1-217ENST00000463672 LTKP29376 864 aa21.85■■□□□ 1.09
GGA1-217ENST00000463672 SLC52A1Q9NWF4 448 aa21.84■■□□□ 1.09
GGA1-217ENST00000463672 IDI1Q13907 227 aa21.83■■□□□ 1.09
GGA1-217ENST00000463672 SCAF1Q9H7N4 1312 aaKnown RBP21.82■■□□□ 1.08
GGA1-217ENST00000463672 IQGAP3Q86VI3 1631 aa21.8■■□□□ 1.08
GGA1-217ENST00000463672 PIP4K2BP78356 416 aa21.8■■□□□ 1.08
GGA1-217ENST00000463672 ALKQ9UM73 1620 aa21.8■■□□□ 1.08
GGA1-217ENST00000463672 E9PCH4 1651 aa21.77■■□□□ 1.08
GGA1-217ENST00000463672 TMEM131LA2VDJ0 1609 aa21.74■■□□□ 1.07
GGA1-217ENST00000463672 XIRP1Q702N8 1843 aaKnown RBP21.74■■□□□ 1.07
GGA1-217ENST00000463672 HSPA1LP34931 641 aa21.74■■□□□ 1.07
GGA1-217ENST00000463672 MYO5BQ9ULV0 1848 aa21.73■■□□□ 1.07
GGA1-217ENST00000463672 NWD1Q149M9 1564 aa21.72■■□□□ 1.07
GGA1-217ENST00000463672 ZFYVE9O95405 1425 aa21.72■■□□□ 1.07
GGA1-217ENST00000463672 NKTRP30414 1462 aaKnown RBP21.71■■□□□ 1.07
GGA1-217ENST00000463672 HDGFP51858 240 aaKnown RBP21.7■■□□□ 1.06
GGA1-217ENST00000463672 ITGAEP38570 1179 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms