RNA–Protein interactions for RNA: ENST00000463653.1

CAPN10-212, Transcript of calpain 10, humanhuman

TSL 2

Gene CAPN10, Length 787 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN10-212ENST00000463653 CLTCQ00610 1675 aaKnown RBP35.21■■■■□ 3.23
CAPN10-212ENST00000463653 NCKAP5LQ9HCH0 1330 aa35.18■■■■□ 3.22
CAPN10-212ENST00000463653 ADGBQ8N7X0 1667 aa35.17■■■■□ 3.22
CAPN10-212ENST00000463653 SHANK2Q9UPX8 1470 aa35.16■■■■□ 3.22
CAPN10-212ENST00000463653 ABCC5O15440 1437 aa35.16■■■■□ 3.22
CAPN10-212ENST00000463653 TSPY4P0CV99 314 aa35.16■■■■□ 3.22
CAPN10-212ENST00000463653 TSPY10P0CW01 314 aa35.16■■■■□ 3.22
CAPN10-212ENST00000463653 A2MP01023 1474 aa35.16■■■■□ 3.22
CAPN10-212ENST00000463653 DAPK1P53355 1430 aa35.15■■■■□ 3.22
CAPN10-212ENST00000463653 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.15■■■■□ 3.22
CAPN10-212ENST00000463653 RRBP1Q9P2E9 1410 aaKnown RBP35.14■■■■□ 3.22
CAPN10-212ENST00000463653 PLXNC1O60486 1568 aa35.13■■■■□ 3.21
CAPN10-212ENST00000463653 GGT6Q6P531 493 aa35.13■■■■□ 3.21
CAPN10-212ENST00000463653 ZNF142P52746 1687 aaPredicted RBP35.13■■■■□ 3.21
CAPN10-212ENST00000463653 MYO3AQ8NEV4 1616 aa35.13■■■■□ 3.21
CAPN10-212ENST00000463653 ZNF335Q9H4Z2 1342 aaPredicted RBP35.1■■■■□ 3.21
CAPN10-212ENST00000463653 PKD2Q13563 968 aa35.1■■■■□ 3.21
CAPN10-212ENST00000463653 FAM50AQ14320 339 aaKnown RBP35.1■■■■□ 3.21
CAPN10-212ENST00000463653 PLA2R1Q13018 1463 aa35.09■■■■□ 3.21
CAPN10-212ENST00000463653 CEP170BQ9Y4F5 1589 aaPredicted RBP35.08■■■■□ 3.21
CAPN10-212ENST00000463653 PTPRKQ15262 1439 aa35.07■■■■□ 3.21
CAPN10-212ENST00000463653 UBAP1LF5GYI3 381 aa35.05■■■■□ 3.2
CAPN10-212ENST00000463653 PPP6R1Q9UPN7 881 aa35.02■■■■□ 3.2
CAPN10-212ENST00000463653 DHX29Q7Z478 1369 aaKnown RBP34.99■■■■□ 3.19
CAPN10-212ENST00000463653 ADGRL2O95490 1459 aa34.97■■■■□ 3.19
CAPN10-212ENST00000463653 DUOX2Q9NRD8 1548 aa34.91■■■■□ 3.18
CAPN10-212ENST00000463653 A2ML1A8K2U0 1454 aa34.91■■■■□ 3.18
CAPN10-212ENST00000463653 ANKRD30AQ9BXX3 1397 aa34.91■■■■□ 3.18
CAPN10-212ENST00000463653 KIF15Q9NS87 1388 aa34.89■■■■□ 3.18
CAPN10-212ENST00000463653 EIF2AK4Q9P2K8 1649 aaKnown RBP34.88■■■■□ 3.17
CAPN10-212ENST00000463653 CHIC2Q9UKJ5 165 aa34.87■■■■□ 3.17
CAPN10-212ENST00000463653 ROCK1Q13464 1354 aa34.85■■■■□ 3.17
CAPN10-212ENST00000463653 POLR1AO95602 1720 aaPredicted RBP34.84■■■■□ 3.17
CAPN10-212ENST00000463653 RRP7BPQ9NSQ0 103 aa34.82■■■■□ 3.16
CAPN10-212ENST00000463653 ERBINQ96RT1 1412 aa34.81■■■■□ 3.16
CAPN10-212ENST00000463653 KIF3BO15066 747 aa34.81■■■■□ 3.16
CAPN10-212ENST00000463653 TNRQ92752 1358 aa34.79■■■■□ 3.16
CAPN10-212ENST00000463653 RNF17Q9BXT8 1623 aaKnown RBP34.79■■■■□ 3.16
CAPN10-212ENST00000463653 SCAF1Q9H7N4 1312 aaKnown RBP34.79■■■■□ 3.16
CAPN10-212ENST00000463653 FBXO31Q5XUX0 539 aaPredicted RBP34.77■■■■□ 3.16
CAPN10-212ENST00000463653 ITGAEP38570 1179 aa34.76■■■■□ 3.16
CAPN10-212ENST00000463653 KDM5DQ9BY66 1539 aa34.75■■■■□ 3.15
CAPN10-212ENST00000463653 PZPP20742 1482 aa34.74■■■■□ 3.15
CAPN10-212ENST00000463653 CPS1P31327 1500 aa34.74■■■■□ 3.15
CAPN10-212ENST00000463653 PIP4K2BP78356 416 aa34.73■■■■□ 3.15
CAPN10-212ENST00000463653 NEURL4Q96JN8 1562 aa34.73■■■■□ 3.15
CAPN10-212ENST00000463653 WASHC2CQ9Y4E1 1318 aa34.73■■■■□ 3.15
CAPN10-212ENST00000463653 FAM135AQ9P2D6 1515 aa34.72■■■■□ 3.15
CAPN10-212ENST00000463653 TOM1O60784 492 aa34.72■■■■□ 3.15
CAPN10-212ENST00000463653 DEPDC5O75140 1603 aa34.7■■■■□ 3.14
CAPN10-212ENST00000463653 ANKLE2Q86XL3 938 aa34.69■■■■□ 3.14
CAPN10-212ENST00000463653 MROH1Q8NDA8 1641 aa34.69■■■■□ 3.14
CAPN10-212ENST00000463653 HSPA1LP34931 641 aa34.68■■■■□ 3.14
CAPN10-212ENST00000463653 ANKRD50Q9ULJ7 1429 aa34.68■■■■□ 3.14
CAPN10-212ENST00000463653 THEMISQ8N1K5 641 aaPredicted RBP34.66■■■■□ 3.14
CAPN10-212ENST00000463653 PRDM15P57071 1507 aaPredicted RBP34.65■■■■□ 3.14
CAPN10-212ENST00000463653 GCC2Q8IWJ2 1684 aa34.63■■■■□ 3.13
CAPN10-212ENST00000463653 NLRP1Q9C000 1473 aa34.62■■■■□ 3.13
CAPN10-212ENST00000463653 ZC3H13Q5T200 1668 aaKnown RBP34.62■■■■□ 3.13
CAPN10-212ENST00000463653 UGGT1Q9NYU2 1555 aa34.62■■■■□ 3.13
CAPN10-212ENST00000463653 MED1Q15648 1581 aaPredicted RBP34.6■■■■□ 3.13
CAPN10-212ENST00000463653 VWDEQ8N2E2 1590 aa34.57■■■■□ 3.13
CAPN10-212ENST00000463653 HFM1A2PYH4 1435 aa34.57■■■■□ 3.13
CAPN10-212ENST00000463653 NAIPQ13075 1403 aa34.57■■■■□ 3.13
CAPN10-212ENST00000463653 NPHP4O75161 1426 aaPredicted RBP34.56■■■■□ 3.12
CAPN10-212ENST00000463653 ABCC3O15438 1527 aa34.55■■■■□ 3.12
CAPN10-212ENST00000463653 UNC13BO14795 1591 aa34.54■■■■□ 3.12
CAPN10-212ENST00000463653 MED14O60244 1454 aa34.54■■■■□ 3.12
CAPN10-212ENST00000463653 CEP152O94986 1710 aa34.52■■■■□ 3.12
CAPN10-212ENST00000463653 IQGAP1P46940 1657 aa34.51■■■■□ 3.12
CAPN10-212ENST00000463653 KANK1Q14678 1352 aa34.47■■■■□ 3.11
CAPN10-212ENST00000463653 LMTK2Q8IWU2 1503 aa34.46■■■■□ 3.11
CAPN10-212ENST00000463653 PHF23Q9BUL5 403 aaPredicted RBP34.43■■■■□ 3.1
CAPN10-212ENST00000463653 ALKQ9UM73 1620 aa34.42■■■■□ 3.1
CAPN10-212ENST00000463653 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.42■■■■□ 3.15e-6■■■■□ 19.5
CAPN10-212ENST00000463653 CFAP65Q6ZU64 1925 aaKnown RBP34.42■■■■□ 3.1
CAPN10-212ENST00000463653 STRCP1A6NGW2 1772 aa34.4■■■■□ 3.1
CAPN10-212ENST00000463653 IQGAP3Q86VI3 1631 aa34.4■■■■□ 3.1
CAPN10-212ENST00000463653 ERVK-7P63135 1459 aa34.38■■■■□ 3.09
CAPN10-212ENST00000463653 ARHGAP31Q2M1Z3 1444 aa34.38■■■■□ 3.09
CAPN10-212ENST00000463653 LRRC7Q96NW7 1537 aa34.36■■■■□ 3.09
CAPN10-212ENST00000463653 SENP3Q9H4L4 574 aaPredicted RBP34.36■■■■□ 3.09
CAPN10-212ENST00000463653 TET3O43151 1660 aa34.35■■■■□ 3.09
CAPN10-212ENST00000463653 SYNMO15061 1565 aa34.35■■■■□ 3.09
CAPN10-212ENST00000463653 EFCAB6Q5THR3 1501 aa34.34■■■■□ 3.09
CAPN10-212ENST00000463653 UBR1Q8IWV7 1749 aa34.32■■■■□ 3.08
CAPN10-212ENST00000463653 NUP155O75694 1391 aa34.3■■■■□ 3.08
CAPN10-212ENST00000463653 SETD5Q9C0A6 1442 aa34.3■■■■□ 3.08
CAPN10-212ENST00000463653 SCAF11Q99590 1463 aaKnown RBP34.27■■■■□ 3.08
CAPN10-212ENST00000463653 RPRD2Q5VT52 1461 aaKnown RBP34.26■■■■□ 3.07
CAPN10-212ENST00000463653 ACIN1Q9UKV3 1341 aaKnown RBP34.23■■■■□ 3.07
CAPN10-212ENST00000463653 E9PCH4 1651 aa34.22■■■■□ 3.07
CAPN10-212ENST00000463653 TXNDC2Q86VQ3 553 aa34.22■■■■□ 3.07
CAPN10-212ENST00000463653 LTKP29376 864 aa34.19■■■■□ 3.06
CAPN10-212ENST00000463653 SLIT1O75093 1534 aa34.17■■■■□ 3.06
CAPN10-212ENST00000463653 RAB3GAP2Q9H2M9 1393 aa34.17■■■■□ 3.06
CAPN10-212ENST00000463653 ARHGAP23Q9P227 1491 aa34.17■■■■□ 3.06
CAPN10-212ENST00000463653 EID1Q9Y6B2 187 aa34.17■■■■□ 3.06
CAPN10-212ENST00000463653 TRIM26Q12899 539 aaPredicted RBP34.15■■■■□ 3.06
CAPN10-212ENST00000463653 NOS1P29475 1434 aa34.14■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms