RNA–Protein interactions for RNA: ENST00000463317.6

VAMP7-204, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 5

Gene VAMP7, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-204ENST00000463317 RXRBP28702 533 aa10.17□□□□□ -0.78
VAMP7-204ENST00000463317 C1QBPQ07021 282 aaKnown RBP10.17□□□□□ -0.78
VAMP7-204ENST00000463317 CDK13Q14004 1512 aaKnown RBP10.17□□□□□ -0.78
VAMP7-204ENST00000463317 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.16□□□□□ -0.78
VAMP7-204ENST00000463317 XIRP1Q702N8 1843 aaKnown RBP10.16□□□□□ -0.78
VAMP7-204ENST00000463317 KIDINS220Q9ULH0 1771 aa10.16□□□□□ -0.78
VAMP7-204ENST00000463317 IQGAP1P46940 1657 aa10.15□□□□□ -0.79
VAMP7-204ENST00000463317 ROBO1Q9Y6N7 1651 aa10.15□□□□□ -0.79
VAMP7-204ENST00000463317 LRP6O75581 1613 aa10.15□□□□□ -0.79
VAMP7-204ENST00000463317 JCADQ9P266 1359 aa10.14□□□□□ -0.79
VAMP7-204ENST00000463317 ABCC1P33527 1531 aa10.13□□□□□ -0.79
VAMP7-204ENST00000463317 ITSN2Q9NZM3 1697 aa10.11□□□□□ -0.79
VAMP7-204ENST00000463317 ARHGAP5Q13017 1502 aa10.11□□□□□ -0.79
VAMP7-204ENST00000463317 RGS12O14924 1447 aa10.1□□□□□ -0.79
VAMP7-204ENST00000463317 SUPT5HO00267 1087 aaKnown RBP10.1□□□□□ -0.79
VAMP7-204ENST00000463317 THEMISQ8N1K5 641 aaPredicted RBP10.1□□□□□ -0.79
VAMP7-204ENST00000463317 LRP5O75197 1615 aa10.1□□□□□ -0.79
VAMP7-204ENST00000463317 PHLPP1O60346 1717 aa10.09□□□□□ -0.79
VAMP7-204ENST00000463317 TNRQ92752 1358 aa10.09□□□□□ -0.79
VAMP7-204ENST00000463317 PRXQ9BXM0 1461 aa10.09□□□□□ -0.79
VAMP7-204ENST00000463317 SPATA31A6Q5VVP1 1343 aa10.08□□□□□ -0.8
VAMP7-204ENST00000463317 KDM5DQ9BY66 1539 aa10.08□□□□□ -0.8
VAMP7-204ENST00000463317 MEX3CQ5U5Q3 659 aaKnown RBP10.08□□□□□ -0.8
VAMP7-204ENST00000463317 ZC3H13Q5T200 1668 aaKnown RBP10.08□□□□□ -0.8
VAMP7-204ENST00000463317 PLXNC1O60486 1568 aa10.07□□□□□ -0.8
VAMP7-204ENST00000463317 SLC4A2P04920 1241 aa10.07□□□□□ -0.8
VAMP7-204ENST00000463317 UGGT1Q9NYU2 1555 aa10.06□□□□□ -0.8
VAMP7-204ENST00000463317 LRRC9Q6ZRR7 1453 aa10.06□□□□□ -0.8
VAMP7-204ENST00000463317 FBXO31Q5XUX0 539 aaPredicted RBP10.06□□□□□ -0.8
VAMP7-204ENST00000463317 COL16A1Q07092 1604 aaPredicted RBP10.06□□□□□ -0.8
VAMP7-204ENST00000463317 EP400Q96L91 3159 aa10.06□□□□□ -0.8
VAMP7-204ENST00000463317 KIF14Q15058 1648 aa10.05□□□□□ -0.8
VAMP7-204ENST00000463317 NUTM2BA6NNL0 878 aaPredicted RBP10.05□□□□□ -0.8
VAMP7-204ENST00000463317 NUTM2EB1AL46 878 aaPredicted RBP10.05□□□□□ -0.8
VAMP7-204ENST00000463317 NUTM2DQ5VT03 806 aaPredicted RBP10.05□□□□□ -0.8
VAMP7-204ENST00000463317 NUTM2AQ8IVF1 878 aaPredicted RBP10.05□□□□□ -0.8
VAMP7-204ENST00000463317 U3KPZ7 1027 aaPredicted RBP10.05□□□□□ -0.8
VAMP7-204ENST00000463317 FAM135AQ9P2D6 1515 aa10.05□□□□□ -0.8
VAMP7-204ENST00000463317 FGD6Q6ZV73 1430 aa10.05□□□□□ -0.8
VAMP7-204ENST00000463317 CDC42BPBQ9Y5S2 1711 aa10.04□□□□□ -0.8
VAMP7-204ENST00000463317 ATAD2Q6PL18 1390 aa10.04□□□□□ -0.8
VAMP7-204ENST00000463317 GGT6Q6P531 493 aa10.04□□□□□ -0.8
VAMP7-204ENST00000463317 NLRP1Q9C000 1473 aa10.04□□□□□ -0.8
VAMP7-204ENST00000463317 ATP7AQ04656 1500 aa10.03□□□□□ -0.8
VAMP7-204ENST00000463317 SAMD9LQ8IVG5 1584 aa10.03□□□□□ -0.8
VAMP7-204ENST00000463317 SLC4A1APQ9BWU0 796 aaKnown RBP10.03□□□□□ -0.8
VAMP7-204ENST00000463317 MAP3K1Q13233 1512 aa10.02□□□□□ -0.8
VAMP7-204ENST00000463317 TMEM94Q12767 1356 aa10.02□□□□□ -0.8
VAMP7-204ENST00000463317 PZPP20742 1482 aa10.02□□□□□ -0.81
VAMP7-204ENST00000463317 AFF2P51816 1311 aa10.02□□□□□ -0.81
VAMP7-204ENST00000463317 MIA2Q96PC5 1412 aa10.01□□□□□ -0.81
VAMP7-204ENST00000463317 YY1P25490 414 aa10.01□□□□□ -0.81
VAMP7-204ENST00000463317 RBM6P78332 1123 aaKnown RBP10.01□□□□□ -0.81
VAMP7-204ENST00000463317 A2MP01023 1474 aa10.01□□□□□ -0.81
VAMP7-204ENST00000463317 SHPRHQ149N8 1683 aa10□□□□□ -0.81
VAMP7-204ENST00000463317 CCDC125Q86Z20 511 aa9.99□□□□□ -0.81
VAMP7-204ENST00000463317 QTRT2Q9H974 415 aaKnown RBP9.98□□□□□ -0.81
VAMP7-204ENST00000463317 SLAIN2Q9P270 581 aa9.98□□□□□ -0.81
VAMP7-204ENST00000463317 SPAG9O60271 1321 aaKnown RBP9.98□□□□□ -0.81
VAMP7-204ENST00000463317 PREX2Q70Z35 1606 aa9.97□□□□□ -0.81
VAMP7-204ENST00000463317 TROQ12816 1431 aaPredicted RBP9.97□□□□□ -0.81
VAMP7-204ENST00000463317 NHSL1Q5SYE7 1610 aa9.96□□□□□ -0.81
VAMP7-204ENST00000463317 SCAF11Q99590 1463 aaKnown RBP9.96□□□□□ -0.82
VAMP7-204ENST00000463317 NWD1Q149M9 1564 aa9.95□□□□□ -0.82
VAMP7-204ENST00000463317 INO80Q9ULG1 1556 aaPredicted RBP9.95□□□□□ -0.82
VAMP7-204ENST00000463317 TIAM1Q13009 1591 aa9.94□□□□□ -0.82
VAMP7-204ENST00000463317 CDK11AQ9UQ88 783 aaPredicted RBP9.94□□□□□ -0.82
VAMP7-204ENST00000463317 AHDC1Q5TGY3 1603 aaPredicted RBP9.93□□□□□ -0.82
VAMP7-204ENST00000463317 LTKP29376 864 aa9.93□□□□□ -0.82
VAMP7-204ENST00000463317 NGLY1Q96IV0 654 aa9.93□□□□□ -0.82
VAMP7-204ENST00000463317 DIP2AQ14689 1571 aa9.92□□□□□ -0.82
VAMP7-204ENST00000463317 PRDM15P57071 1507 aaPredicted RBP9.92□□□□□ -0.82
VAMP7-204ENST00000463317 SENP3-EIF4A1A0A087X0R7 540 aa9.92□□□□□ -0.82
VAMP7-204ENST00000463317 KCNA6P17658 529 aa9.92□□□□□ -0.82
VAMP7-204ENST00000463317 PROSER2Q86WR7 435 aaPredicted RBP9.92□□□□□ -0.82
VAMP7-204ENST00000463317 ARHGAP23Q9P227 1491 aa9.91□□□□□ -0.82
VAMP7-204ENST00000463317 CLIP1P30622 1438 aa9.91□□□□□ -0.82
VAMP7-204ENST00000463317 MSH6P52701 1360 aa9.91□□□□□ -0.82
VAMP7-204ENST00000463317 HRCP23327 699 aa9.91□□□□□ -0.82
VAMP7-204ENST00000463317 ABCC3O15438 1527 aa9.91□□□□□ -0.82
VAMP7-204ENST00000463317 SYCP2Q9BX26 1530 aa9.91□□□□□ -0.82
VAMP7-204ENST00000463317 ADGBQ8N7X0 1667 aa9.9□□□□□ -0.82
VAMP7-204ENST00000463317 RANGAP1P46060 587 aaPredicted RBP9.9□□□□□ -0.82
VAMP7-204ENST00000463317 SLIT1O75093 1534 aa9.9□□□□□ -0.82
VAMP7-204ENST00000463317 BCL9LQ86UU0 1499 aa9.9□□□□□ -0.83
VAMP7-204ENST00000463317 TXNDC2Q86VQ3 553 aa9.89□□□□□ -0.83
VAMP7-204ENST00000463317 UBR1Q8IWV7 1749 aa9.89□□□□□ -0.83
VAMP7-204ENST00000463317 NCOA2Q15596 1464 aa9.89□□□□□ -0.83
VAMP7-204ENST00000463317 CEP350Q5VT06 3117 aa9.88□□□□□ -0.83
VAMP7-204ENST00000463317 NKTRP30414 1462 aaKnown RBP9.88□□□□□ -0.83
VAMP7-204ENST00000463317 HNRNPMP52272 730 aaKnown RBP eCLIP9.88□□□□□ -0.832e-6■■□□□ 12.5
VAMP7-204ENST00000463317 C8orf37Q96NL8 207 aa9.88□□□□□ -0.83
VAMP7-204ENST00000463317 CDC42BPAQ5VT25 1732 aa9.87□□□□□ -0.83
VAMP7-204ENST00000463317 KDM5AP29375 1690 aaKnown RBP9.87□□□□□ -0.83
VAMP7-204ENST00000463317 BLMP54132 1417 aaPredicted RBP9.87□□□□□ -0.83
VAMP7-204ENST00000463317 WASHC2CQ9Y4E1 1318 aa9.86□□□□□ -0.83
VAMP7-204ENST00000463317 DEFB132Q7Z7B7 95 aa9.86□□□□□ -0.83
VAMP7-204ENST00000463317 KIAA1107Q9UPP5 1409 aa9.85□□□□□ -0.83
VAMP7-204ENST00000463317 PSDA5PKW4 1024 aaPredicted RBP9.85□□□□□ -0.83
VAMP7-204ENST00000463317 CAPN15O75808 1086 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms