RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 FAM135AQ9P2D6 1515 aa33.27■■■□□ 2.92
CPSF7-209ENST00000463244 KIF3BO15066 747 aa33.26■■■□□ 2.91
CPSF7-209ENST00000463244 KDM5DQ9BY66 1539 aa33.25■■■□□ 2.91
CPSF7-209ENST00000463244 RSPH4AQ5TD94 716 aa33.25■■■□□ 2.91
CPSF7-209ENST00000463244 UBAP1LF5GYI3 381 aa33.23■■■□□ 2.91
CPSF7-209ENST00000463244 PZPP20742 1482 aa33.23■■■□□ 2.91
CPSF7-209ENST00000463244 TNRQ92752 1358 aa33.22■■■□□ 2.91
CPSF7-209ENST00000463244 SOCS7O14512 581 aa33.21■■■□□ 2.91
CPSF7-209ENST00000463244 FBXO31Q5XUX0 539 aaPredicted RBP33.21■■■□□ 2.91
CPSF7-209ENST00000463244 POLR1AO95602 1720 aaPredicted RBP33.21■■■□□ 2.91
CPSF7-209ENST00000463244 ARHGEF5Q12774 1597 aa33.2■■■□□ 2.91
CPSF7-209ENST00000463244 NEURL4Q96JN8 1562 aa33.17■■■□□ 2.9
CPSF7-209ENST00000463244 WASHC2CQ9Y4E1 1318 aa33.16■■■□□ 2.9
CPSF7-209ENST00000463244 TSPY4P0CV99 314 aa33.1■■■□□ 2.89
CPSF7-209ENST00000463244 TSPY10P0CW01 314 aa33.1■■■□□ 2.89
CPSF7-209ENST00000463244 MIA2Q96PC5 1412 aa33.1■■■□□ 2.89
CPSF7-209ENST00000463244 NLRP1Q9C000 1473 aa33.09■■■□□ 2.89
CPSF7-209ENST00000463244 CPS1P31327 1500 aa33.07■■■□□ 2.89
CPSF7-209ENST00000463244 LRRC9Q6ZRR7 1453 aa33.07■■■□□ 2.88
CPSF7-209ENST00000463244 RNF17Q9BXT8 1623 aaKnown RBP33.06■■■□□ 2.88
CPSF7-209ENST00000463244 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.06■■■□□ 2.881e-11■■□□□ 12.1
CPSF7-209ENST00000463244 SHANK2Q9UPX8 1470 aa33.05■■■□□ 2.88
CPSF7-209ENST00000463244 UGGT1Q9NYU2 1555 aa33.04■■■□□ 2.88
CPSF7-209ENST00000463244 MAST1Q9Y2H9 1570 aa33.04■■■□□ 2.88
CPSF7-209ENST00000463244 VPS8Q8N3P4 1428 aa33.04■■■□□ 2.88
CPSF7-209ENST00000463244 ANKLE2Q86XL3 938 aa33.04■■■□□ 2.88
CPSF7-209ENST00000463244 THEMISQ8N1K5 641 aaPredicted RBP33.04■■■□□ 2.88
CPSF7-209ENST00000463244 DEPDC5O75140 1603 aa33.01■■■□□ 2.87
CPSF7-209ENST00000463244 ZC3H13Q5T200 1668 aaKnown RBP33.01■■■□□ 2.87
CPSF7-209ENST00000463244 ABCC3O15438 1527 aa33■■■□□ 2.87
CPSF7-209ENST00000463244 VWDEQ8N2E2 1590 aa33■■■□□ 2.87
CPSF7-209ENST00000463244 MED14O60244 1454 aa32.99■■■□□ 2.87
CPSF7-209ENST00000463244 EIF2AK4Q9P2K8 1649 aaKnown RBP32.99■■■□□ 2.87
CPSF7-209ENST00000463244 NPHP4O75161 1426 aaPredicted RBP32.96■■■□□ 2.87
CPSF7-209ENST00000463244 TOM1O60784 492 aa32.94■■■□□ 2.86
CPSF7-209ENST00000463244 MAP3K1Q13233 1512 aa32.93■■■□□ 2.86
CPSF7-209ENST00000463244 MROH1Q8NDA8 1641 aa32.93■■■□□ 2.86
CPSF7-209ENST00000463244 IQGAP1P46940 1657 aa32.92■■■□□ 2.86
CPSF7-209ENST00000463244 SCAF1Q9H7N4 1312 aaKnown RBP32.92■■■□□ 2.86
CPSF7-209ENST00000463244 PIP4K2BP78356 416 aa32.91■■■□□ 2.86
CPSF7-209ENST00000463244 KANK4Q5T7N3 995 aaPredicted RBP32.91■■■□□ 2.86
CPSF7-209ENST00000463244 ERVK-7P63135 1459 aa32.91■■■□□ 2.86
CPSF7-209ENST00000463244 HSPA1LP34931 641 aa32.9■■■□□ 2.86
CPSF7-209ENST00000463244 MYOM3Q5VTT5 1437 aa32.9■■■□□ 2.86
CPSF7-209ENST00000463244 LOC105371045A0A1W2PR82 267 aa32.87■■■□□ 2.85
CPSF7-209ENST00000463244 CEP152O94986 1710 aa32.87■■■□□ 2.85
CPSF7-209ENST00000463244 CFAP65Q6ZU64 1925 aaKnown RBP32.85■■■□□ 2.85
CPSF7-209ENST00000463244 DUOX2Q9NRD8 1548 aa32.85■■■□□ 2.85
CPSF7-209ENST00000463244 ALKQ9UM73 1620 aa32.84■■■□□ 2.85
CPSF7-209ENST00000463244 STRCP1A6NGW2 1772 aa32.83■■■□□ 2.85
CPSF7-209ENST00000463244 MED1Q15648 1581 aaPredicted RBP32.81■■■□□ 2.84
CPSF7-209ENST00000463244 UBR1Q8IWV7 1749 aa32.81■■■□□ 2.84
CPSF7-209ENST00000463244 PRDM15P57071 1507 aaPredicted RBP32.77■■■□□ 2.84
CPSF7-209ENST00000463244 LRRC7Q96NW7 1537 aa32.76■■■□□ 2.83
CPSF7-209ENST00000463244 CROCC2H7BZ55 1655 aa32.75■■■□□ 2.83
CPSF7-209ENST00000463244 SYNMO15061 1565 aa32.75■■■□□ 2.83
CPSF7-209ENST00000463244 KIF15Q9NS87 1388 aa32.74■■■□□ 2.83
CPSF7-209ENST00000463244 ARHGAP31Q2M1Z3 1444 aa32.73■■■□□ 2.83
CPSF7-209ENST00000463244 SCAF11Q99590 1463 aaKnown RBP32.73■■■□□ 2.83
CPSF7-209ENST00000463244 ERBINQ96RT1 1412 aa32.72■■■□□ 2.83
CPSF7-209ENST00000463244 ABCC5O15440 1437 aa32.71■■■□□ 2.83
CPSF7-209ENST00000463244 ARHGAP23Q9P227 1491 aa32.7■■■□□ 2.83
CPSF7-209ENST00000463244 SLIT1O75093 1534 aa32.7■■■□□ 2.83
CPSF7-209ENST00000463244 PTPN23Q9H3S7 1636 aa32.69■■■□□ 2.82
CPSF7-209ENST00000463244 LTKP29376 864 aa32.66■■■□□ 2.82
CPSF7-209ENST00000463244 RRP7BPQ9NSQ0 103 aa32.66■■■□□ 2.82
CPSF7-209ENST00000463244 DAPK1P53355 1430 aa32.63■■■□□ 2.81
CPSF7-209ENST00000463244 TXNDC2Q86VQ3 553 aa32.63■■■□□ 2.81
CPSF7-209ENST00000463244 PIK3C2BO00750 1634 aa32.61■■■□□ 2.81
CPSF7-209ENST00000463244 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.59■■■□□ 2.814e-11■□□□□ 9.4
CPSF7-209ENST00000463244 FGD6Q6ZV73 1430 aa32.58■■■□□ 2.81
CPSF7-209ENST00000463244 KANK1Q14678 1352 aa32.57■■■□□ 2.8
CPSF7-209ENST00000463244 XIRP1Q702N8 1843 aaKnown RBP32.56■■■□□ 2.8
CPSF7-209ENST00000463244 APLP2Q06481 763 aa32.56■■■□□ 2.8
CPSF7-209ENST00000463244 EID1Q9Y6B2 187 aa32.56■■■□□ 2.8
CPSF7-209ENST00000463244 TMEM2Q9UHN6 1383 aa32.56■■■□□ 2.8
CPSF7-209ENST00000463244 KDM5AP29375 1690 aaKnown RBP32.55■■■□□ 2.8
CPSF7-209ENST00000463244 LMTK2Q8IWU2 1503 aa32.55■■■□□ 2.8
CPSF7-209ENST00000463244 PHF23Q9BUL5 403 aaPredicted RBP32.53■■■□□ 2.8
CPSF7-209ENST00000463244 SENP3Q9H4L4 574 aaPredicted RBP32.52■■■□□ 2.8
CPSF7-209ENST00000463244 ANKRD30AQ9BXX3 1397 aa32.51■■■□□ 2.79
CPSF7-209ENST00000463244 EFCAB6Q5THR3 1501 aa32.5■■■□□ 2.79
CPSF7-209ENST00000463244 STAG3Q9UJ98 1225 aa32.49■■■□□ 2.79
CPSF7-209ENST00000463244 CHIC2Q9UKJ5 165 aa32.48■■■□□ 2.79
CPSF7-209ENST00000463244 IDI1Q13907 227 aa32.46■■■□□ 2.79
CPSF7-209ENST00000463244 NOS1P29475 1434 aa32.43■■■□□ 2.78
CPSF7-209ENST00000463244 TET3O43151 1660 aa32.41■■■□□ 2.78
CPSF7-209ENST00000463244 ADGRL2O95490 1459 aa32.4■■■□□ 2.78
CPSF7-209ENST00000463244 ADGRB3O60242 1522 aa32.39■■■□□ 2.78
CPSF7-209ENST00000463244 TMEM94Q12767 1356 aa32.38■■■□□ 2.77
CPSF7-209ENST00000463244 FAM135BQ49AJ0 1406 aa32.37■■■□□ 2.77
CPSF7-209ENST00000463244 KCNA6P17658 529 aa32.37■■■□□ 2.77
CPSF7-209ENST00000463244 SLC26A8Q96RN1 970 aa32.34■■■□□ 2.77
CPSF7-209ENST00000463244 SLC52A1Q9NWF4 448 aa32.33■■■□□ 2.77
CPSF7-209ENST00000463244 NWD1Q149M9 1564 aa32.31■■■□□ 2.76
CPSF7-209ENST00000463244 RPRD2Q5VT52 1461 aaKnown RBP32.3■■■□□ 2.76
CPSF7-209ENST00000463244 NKTRP30414 1462 aaKnown RBP32.29■■■□□ 2.76
CPSF7-209ENST00000463244 ANKRD50Q9ULJ7 1429 aa32.28■■■□□ 2.76
CPSF7-209ENST00000463244 PROSER2Q86WR7 435 aaPredicted RBP32.28■■■□□ 2.76
CPSF7-209ENST00000463244 RGS17Q9UGC6 210 aaPredicted RBP32.28■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms