RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 DUOX2Q9NRD8 1548 aa20.24■□□□□ 0.83
HDAC1-203ENST00000463172 DMRT2Q9Y5R5 561 aa20.24■□□□□ 0.83
HDAC1-203ENST00000463172 ABCC5O15440 1437 aa20.22■□□□□ 0.83
HDAC1-203ENST00000463172 DAPK1P53355 1430 aa20.22■□□□□ 0.83
HDAC1-203ENST00000463172 RNF17Q9BXT8 1623 aaKnown RBP20.2■□□□□ 0.82
HDAC1-203ENST00000463172 KIF15Q9NS87 1388 aa20.2■□□□□ 0.82
HDAC1-203ENST00000463172 ZC3H13Q5T200 1668 aaKnown RBP20.19■□□□□ 0.82
HDAC1-203ENST00000463172 PTPRKQ15262 1439 aa20.19■□□□□ 0.82
HDAC1-203ENST00000463172 ANKRD30AQ9BXX3 1397 aa20.19■□□□□ 0.82
HDAC1-203ENST00000463172 FAM50AQ14320 339 aaKnown RBP20.18■□□□□ 0.82
HDAC1-203ENST00000463172 ERBINQ96RT1 1412 aa20.18■□□□□ 0.82
HDAC1-203ENST00000463172 MYO3AQ8NEV4 1616 aa20.17■□□□□ 0.82
HDAC1-203ENST00000463172 RRP7BPQ9NSQ0 103 aa20.16■□□□□ 0.82
HDAC1-203ENST00000463172 PZPP20742 1482 aa20.16■□□□□ 0.82
HDAC1-203ENST00000463172 ZNF142P52746 1687 aaPredicted RBP20.16■□□□□ 0.82
HDAC1-203ENST00000463172 STRCQ7RTU9 1775 aa20.14■□□□□ 0.81
HDAC1-203ENST00000463172 CEP170BQ9Y4F5 1589 aaPredicted RBP20.13■□□□□ 0.81
HDAC1-203ENST00000463172 TNRQ92752 1358 aa20.12■□□□□ 0.81
HDAC1-203ENST00000463172 CHIC2Q9UKJ5 165 aa20.12■□□□□ 0.81
HDAC1-203ENST00000463172 KANK1Q14678 1352 aa20.11■□□□□ 0.81
HDAC1-203ENST00000463172 CAMSAP1Q5T5Y3 1602 aa20.11■□□□□ 0.81
HDAC1-203ENST00000463172 ABCC3O15438 1527 aa20.11■□□□□ 0.81
HDAC1-203ENST00000463172 NCOA1Q15788 1441 aa20.1■□□□□ 0.81
HDAC1-203ENST00000463172 A2ML1A8K2U0 1454 aa20.1■□□□□ 0.81
HDAC1-203ENST00000463172 PTPRTO14522 1441 aa20.1■□□□□ 0.81
HDAC1-203ENST00000463172 ADGRL2O95490 1459 aa20.09■□□□□ 0.81
HDAC1-203ENST00000463172 PRDM15P57071 1507 aaPredicted RBP20.08■□□□□ 0.81
HDAC1-203ENST00000463172 CEP152O94986 1710 aa20.08■□□□□ 0.81
HDAC1-203ENST00000463172 MROH1Q8NDA8 1641 aa20.08■□□□□ 0.8
HDAC1-203ENST00000463172 PLA2R1Q13018 1463 aa20.07■□□□□ 0.8
HDAC1-203ENST00000463172 PKD2Q13563 968 aa20.07■□□□□ 0.8
HDAC1-203ENST00000463172 FBXO31Q5XUX0 539 aaPredicted RBP20.07■□□□□ 0.8
HDAC1-203ENST00000463172 ILDR1Q86SU0 546 aaPredicted RBP20.07■□□□□ 0.8
HDAC1-203ENST00000463172 NLRP1Q9C000 1473 aa20.06■□□□□ 0.8
HDAC1-203ENST00000463172 DEPDC5O75140 1603 aa20.05■□□□□ 0.8
HDAC1-203ENST00000463172 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.05■□□□□ 0.82e-9■□□□□ 10.2
HDAC1-203ENST00000463172 FBXO41Q8TF61 875 aa20.04■□□□□ 0.8
HDAC1-203ENST00000463172 CFAP65Q6ZU64 1925 aaKnown RBP20.03■□□□□ 0.8
HDAC1-203ENST00000463172 THEMISQ8N1K5 641 aaPredicted RBP20.02■□□□□ 0.8
HDAC1-203ENST00000463172 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.02■□□□□ 0.8
HDAC1-203ENST00000463172 SPATA31D1Q6ZQQ2 1576 aa20.02■□□□□ 0.8
HDAC1-203ENST00000463172 ARHGAP31Q2M1Z3 1444 aa20.01■□□□□ 0.79
HDAC1-203ENST00000463172 ANKRD50Q9ULJ7 1429 aa20.01■□□□□ 0.79
HDAC1-203ENST00000463172 ERVK-7P63135 1459 aa20■□□□□ 0.79
HDAC1-203ENST00000463172 PPARGC1BQ86YN6 1023 aaKnown RBP20■□□□□ 0.79
HDAC1-203ENST00000463172 CERKQ8TCT0 537 aa20■□□□□ 0.79
HDAC1-203ENST00000463172 UGGT1Q9NYU2 1555 aa19.99■□□□□ 0.79
HDAC1-203ENST00000463172 NCKAP5LQ9HCH0 1330 aa19.99■□□□□ 0.79
HDAC1-203ENST00000463172 ROCK1Q13464 1354 aa19.98■□□□□ 0.79
HDAC1-203ENST00000463172 POLR1AO95602 1720 aaPredicted RBP19.98■□□□□ 0.79
HDAC1-203ENST00000463172 LMTK2Q8IWU2 1503 aa19.97■□□□□ 0.79
HDAC1-203ENST00000463172 ANKLE2Q86XL3 938 aa19.95■□□□□ 0.78
HDAC1-203ENST00000463172 ITGAEP38570 1179 aa19.94■□□□□ 0.78
HDAC1-203ENST00000463172 VWDEQ8N2E2 1590 aa19.94■□□□□ 0.78
HDAC1-203ENST00000463172 EFCAB6Q5THR3 1501 aa19.91■□□□□ 0.78
HDAC1-203ENST00000463172 RRBP1Q9P2E9 1410 aaKnown RBP19.89■□□□□ 0.77
HDAC1-203ENST00000463172 STAG3Q9UJ98 1225 aa19.89■□□□□ 0.77
HDAC1-203ENST00000463172 UBR1Q8IWV7 1749 aa19.88■□□□□ 0.77
HDAC1-203ENST00000463172 UNC13BO14795 1591 aa19.88■□□□□ 0.77
HDAC1-203ENST00000463172 RPRD2Q5VT52 1461 aaKnown RBP19.88■□□□□ 0.77
HDAC1-203ENST00000463172 TET3O43151 1660 aa19.87■□□□□ 0.77
HDAC1-203ENST00000463172 IQSEC2Q5JU85 1478 aa19.86■□□□□ 0.77
HDAC1-203ENST00000463172 GCC2Q8IWJ2 1684 aa19.86■□□□□ 0.77
HDAC1-203ENST00000463172 LTBP4Q8N2S1 1624 aa19.85■□□□□ 0.77
HDAC1-203ENST00000463172 NEURL4Q96JN8 1562 aa19.85■□□□□ 0.77
HDAC1-203ENST00000463172 NPHP4O75161 1426 aaPredicted RBP19.85■□□□□ 0.77
HDAC1-203ENST00000463172 KDM5AP29375 1690 aaKnown RBP19.84■□□□□ 0.77
HDAC1-203ENST00000463172 EID1Q9Y6B2 187 aa19.84■□□□□ 0.77
HDAC1-203ENST00000463172 MED14O60244 1454 aa19.84■□□□□ 0.77
HDAC1-203ENST00000463172 ZNF335Q9H4Z2 1342 aaPredicted RBP19.83■□□□□ 0.77
HDAC1-203ENST00000463172 SLC52A1Q9NWF4 448 aa19.83■□□□□ 0.77
HDAC1-203ENST00000463172 PIK3C2BO00750 1634 aa19.83■□□□□ 0.76
HDAC1-203ENST00000463172 IQGAP1P46940 1657 aa19.82■□□□□ 0.76
HDAC1-203ENST00000463172 NOS1P29475 1434 aa19.82■□□□□ 0.76
HDAC1-203ENST00000463172 IQGAP3Q86VI3 1631 aa19.81■□□□□ 0.76
HDAC1-203ENST00000463172 SLIT1O75093 1534 aa19.8■□□□□ 0.76
HDAC1-203ENST00000463172 NUP155O75694 1391 aa19.8■□□□□ 0.76
HDAC1-203ENST00000463172 SCAF11Q99590 1463 aaKnown RBP19.79■□□□□ 0.76
HDAC1-203ENST00000463172 SYNMO15061 1565 aa19.79■□□□□ 0.76
HDAC1-203ENST00000463172 CPS1P31327 1500 aa19.78■□□□□ 0.76
HDAC1-203ENST00000463172 IDI1Q13907 227 aa19.78■□□□□ 0.76
HDAC1-203ENST00000463172 TXNDC2Q86VQ3 553 aa19.78■□□□□ 0.76
HDAC1-203ENST00000463172 ARHGAP23Q9P227 1491 aa19.77■□□□□ 0.76
HDAC1-203ENST00000463172 TMEM2Q9UHN6 1383 aa19.76■□□□□ 0.75
HDAC1-203ENST00000463172 ADGRB3O60242 1522 aa19.76■□□□□ 0.75
HDAC1-203ENST00000463172 E9PCH4 1651 aa19.75■□□□□ 0.75
HDAC1-203ENST00000463172 HDGFP51858 240 aaKnown RBP19.74■□□□□ 0.75
HDAC1-203ENST00000463172 NAIPQ13075 1403 aa19.7■□□□□ 0.74
HDAC1-203ENST00000463172 LTKP29376 864 aa19.7■□□□□ 0.74
HDAC1-203ENST00000463172 HFM1A2PYH4 1435 aa19.69■□□□□ 0.74
HDAC1-203ENST00000463172 UBAP1LF5GYI3 381 aa19.69■□□□□ 0.74
HDAC1-203ENST00000463172 CHGAP10645 457 aaKnown RBP19.68■□□□□ 0.74
HDAC1-203ENST00000463172 BCANQ96GW7 911 aa19.67■□□□□ 0.74
HDAC1-203ENST00000463172 MYO5BQ9ULV0 1848 aa19.67■□□□□ 0.74
HDAC1-203ENST00000463172 PPP1R15AO75807 674 aaPredicted RBP19.66■□□□□ 0.74
HDAC1-203ENST00000463172 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.66■□□□□ 0.74
HDAC1-203ENST00000463172 TMEM131LA2VDJ0 1609 aa19.65■□□□□ 0.74
HDAC1-203ENST00000463172 SPHKAPQ2M3C7 1700 aa19.65■□□□□ 0.74
HDAC1-203ENST00000463172 TOM1O60784 492 aa19.65■□□□□ 0.74
HDAC1-203ENST00000463172 TRIM52Q96A61 297 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms