RNA–Protein interactions for RNA: ENST00000462862.1

ERCC4-203, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 3

Gene ERCC4, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-203ENST00000462862 UGGT2Q9NYU1 1516 aa6.2□□□□□ -1.42
ERCC4-203ENST00000462862 TDRD9Q8NDG6 1382 aaKnown RBP6.2□□□□□ -1.42
ERCC4-203ENST00000462862 IQGAP2Q13576 1575 aa6.2□□□□□ -1.42
ERCC4-203ENST00000462862 POTEB3A0JP26 581 aa6.2□□□□□ -1.42
ERCC4-203ENST00000462862 STK25O00506 426 aa6.2□□□□□ -1.42
ERCC4-203ENST00000462862 DOK7Q18PE1 504 aa6.2□□□□□ -1.42
ERCC4-203ENST00000462862 POTEBQ6S5H4 581 aa6.2□□□□□ -1.42
ERCC4-203ENST00000462862 TMEM92Q6UXU6 159 aa6.2□□□□□ -1.42
ERCC4-203ENST00000462862 HS3ST6Q96QI5 342 aa6.2□□□□□ -1.42
ERCC4-203ENST00000462862 CFAP43Q8NDM7 1665 aa6.2□□□□□ -1.42
ERCC4-203ENST00000462862 RGL2O15211 777 aa6.19□□□□□ -1.42
ERCC4-203ENST00000462862 HOXB1P14653 301 aaPredicted RBP6.19□□□□□ -1.42
ERCC4-203ENST00000462862 LRRC9Q6ZRR7 1453 aa6.19□□□□□ -1.42
ERCC4-203ENST00000462862 SYNJ2O15056 1496 aa6.18□□□□□ -1.42
ERCC4-203ENST00000462862 SPNS2Q8IVW8 549 aa6.18□□□□□ -1.42
ERCC4-203ENST00000462862 FBXO22Q8NEZ5 403 aa6.18□□□□□ -1.42
ERCC4-203ENST00000462862 CCNB3Q8WWL7 1395 aa6.18□□□□□ -1.42
ERCC4-203ENST00000462862 GRIN2AQ12879 1464 aa6.17□□□□□ -1.42
ERCC4-203ENST00000462862 RIMBP2O15034 1052 aa6.17□□□□□ -1.42
ERCC4-203ENST00000462862 MFRPQ9BY79 579 aa6.17□□□□□ -1.42
ERCC4-203ENST00000462862 EIF4G3O43432 1585 aaKnown RBP6.17□□□□□ -1.42
ERCC4-203ENST00000462862 HECW1Q76N89 1606 aa6.17□□□□□ -1.42
ERCC4-203ENST00000462862 SNAPC4Q5SXM2 1469 aa6.16□□□□□ -1.42
ERCC4-203ENST00000462862 EHBP1L1Q8N3D4 1523 aa6.16□□□□□ -1.42
ERCC4-203ENST00000462862 PCF11O94913 1555 aaKnown RBP6.16□□□□□ -1.42
ERCC4-203ENST00000462862 MMRN1Q13201 1228 aa6.16□□□□□ -1.42
ERCC4-203ENST00000462862 ERBB3P21860 1342 aa6.15□□□□□ -1.43
ERCC4-203ENST00000462862 NUP160Q12769 1436 aa6.15□□□□□ -1.43
ERCC4-203ENST00000462862 CARMIL2Q6F5E8 1435 aa6.15□□□□□ -1.43
ERCC4-203ENST00000462862 CCER1Q8TC90 406 aaPredicted RBP6.14□□□□□ -1.43
ERCC4-203ENST00000462862 KRTAP3-3Q9BYR6 98 aa6.14□□□□□ -1.43
ERCC4-203ENST00000462862 KRTAP3-2Q9BYR7 98 aa6.14□□□□□ -1.43
ERCC4-203ENST00000462862 FHOD3Q2V2M9 1422 aa6.14□□□□□ -1.43
ERCC4-203ENST00000462862 ZSWIM6Q9HCJ5 1215 aa6.13□□□□□ -1.43
ERCC4-203ENST00000462862 MTUS2Q5JR59 1369 aa6.13□□□□□ -1.43
ERCC4-203ENST00000462862 GPR153Q6NV75 609 aa6.12□□□□□ -1.43
ERCC4-203ENST00000462862 MIA2Q96PC5 1412 aa6.12□□□□□ -1.43
ERCC4-203ENST00000462862 CDK11AQ9UQ88 783 aaPredicted RBP6.12□□□□□ -1.43
ERCC4-203ENST00000462862 KIAA0556O60303 1618 aa6.11□□□□□ -1.43
ERCC4-203ENST00000462862 ZNF608Q9ULD9 1512 aaPredicted RBP6.11□□□□□ -1.43
ERCC4-203ENST00000462862 AKNAQ7Z591 1439 aa6.11□□□□□ -1.43
ERCC4-203ENST00000462862 VARS2Q5ST30 1063 aaKnown RBP6.11□□□□□ -1.43
ERCC4-203ENST00000462862 SUPT6HQ7KZ85 1726 aaKnown RBP6.11□□□□□ -1.43
ERCC4-203ENST00000462862 ARHGEF11O15085 1522 aa6.1□□□□□ -1.43
ERCC4-203ENST00000462862 ARSIQ5FYB1 569 aa6.1□□□□□ -1.43
ERCC4-203ENST00000462862 CHMP7Q8WUX9 453 aaPredicted RBP6.1□□□□□ -1.43
ERCC4-203ENST00000462862 EPRSP07814 1512 aaKnown RBP6.09□□□□□ -1.43
ERCC4-203ENST00000462862 MYOM3Q5VTT5 1437 aa6.09□□□□□ -1.43
ERCC4-203ENST00000462862 FGD6Q6ZV73 1430 aa6.09□□□□□ -1.43
ERCC4-203ENST00000462862 C2orf72A6NCS6 295 aa6.09□□□□□ -1.43
ERCC4-203ENST00000462862 RANGAP1P46060 587 aaPredicted RBP6.09□□□□□ -1.43
ERCC4-203ENST00000462862 KANK4Q5T7N3 995 aaPredicted RBP6.09□□□□□ -1.43
ERCC4-203ENST00000462862 TIMELESSQ9UNS1 1208 aa6.09□□□□□ -1.43
ERCC4-203ENST00000462862 DISP1Q96F81 1524 aa6.09□□□□□ -1.44
ERCC4-203ENST00000462862 KIF3CO14782 793 aa6.08□□□□□ -1.44
ERCC4-203ENST00000462862 PPP1R37O75864 691 aa6.08□□□□□ -1.44
ERCC4-203ENST00000462862 TCOF1Q13428 1488 aaKnown RBP6.08□□□□□ -1.44
ERCC4-203ENST00000462862 PHLDB1Q86UU1 1377 aa6.07□□□□□ -1.44
ERCC4-203ENST00000462862 RAPGEF6Q8TEU7 1601 aa6.07□□□□□ -1.44
ERCC4-203ENST00000462862 PPARGC1BQ86YN6 1023 aaKnown RBP6.07□□□□□ -1.44
ERCC4-203ENST00000462862 ZNF687Q8N1G0 1237 aa6.07□□□□□ -1.44
ERCC4-203ENST00000462862 KHSRPQ92945 711 aaKnown RBP eCLIP6.07□□□□□ -1.44
ERCC4-203ENST00000462862 NCOA2Q15596 1464 aa6.07□□□□□ -1.44
ERCC4-203ENST00000462862 SETD5Q9C0A6 1442 aa6.07□□□□□ -1.44
ERCC4-203ENST00000462862 CEP170Q5SW79 1584 aa6.06□□□□□ -1.44
ERCC4-203ENST00000462862 DNAJC5Q9H3Z4 198 aa6.06□□□□□ -1.44
ERCC4-203ENST00000462862 HFM1A2PYH4 1435 aa6.06□□□□□ -1.44
ERCC4-203ENST00000462862 TMC2Q8TDI7 906 aa6.05□□□□□ -1.44
ERCC4-203ENST00000462862 TROQ12816 1431 aaPredicted RBP6.05□□□□□ -1.44
ERCC4-203ENST00000462862 ROCK1Q13464 1354 aa6.05□□□□□ -1.44
ERCC4-203ENST00000462862 DHX57Q6P158 1386 aaKnown RBP6.05□□□□□ -1.44
ERCC4-203ENST00000462862 ADCY10Q96PN6 1610 aa6.04□□□□□ -1.44
ERCC4-203ENST00000462862 ZNF316A6NFI3 1004 aaPredicted RBP6.04□□□□□ -1.44
ERCC4-203ENST00000462862 HS6ST3Q8IZP7 471 aa6.04□□□□□ -1.44
ERCC4-203ENST00000462862 JPH4Q96JJ6 628 aa6.04□□□□□ -1.44
ERCC4-203ENST00000462862 SHROOM2Q13796 1616 aa6.03□□□□□ -1.44
ERCC4-203ENST00000462862 NUP153P49790 1475 aaKnown RBP6.03□□□□□ -1.44
ERCC4-203ENST00000462862 ABCA8O94911 1581 aa6.03□□□□□ -1.44
ERCC4-203ENST00000462862 CHGAP10645 457 aaKnown RBP6.03□□□□□ -1.44
ERCC4-203ENST00000462862 P3H3Q8IVL6 736 aa6.03□□□□□ -1.44
ERCC4-203ENST00000462862 ITSN2Q9NZM3 1697 aa6.03□□□□□ -1.44
ERCC4-203ENST00000462862 PTPN23Q9H3S7 1636 aa6.03□□□□□ -1.44
ERCC4-203ENST00000462862 TTBK1Q5TCY1 1321 aaPredicted RBP6.02□□□□□ -1.45
ERCC4-203ENST00000462862 NUDT7P0C024 238 aa6.02□□□□□ -1.45
ERCC4-203ENST00000462862 PCDHGA4Q9Y5G9 962 aa6.02□□□□□ -1.45
ERCC4-203ENST00000462862 RAB3GAP2Q9H2M9 1393 aa6.02□□□□□ -1.45
ERCC4-203ENST00000462862 UACAQ9BZF9 1416 aa6.01□□□□□ -1.45
ERCC4-203ENST00000462862 SLC34A2O95436 690 aa6.01□□□□□ -1.45
ERCC4-203ENST00000462862 RSPH4AQ5TD94 716 aa6.01□□□□□ -1.45
ERCC4-203ENST00000462862 ATP1B4Q9UN42 357 aaPredicted RBP6.01□□□□□ -1.45
ERCC4-203ENST00000462862 PTPRGP23470 1445 aa6□□□□□ -1.45
ERCC4-203ENST00000462862 KIF14Q15058 1648 aa6□□□□□ -1.45
ERCC4-203ENST00000462862 FAM50AQ14320 339 aaKnown RBP6□□□□□ -1.45
ERCC4-203ENST00000462862 UHRF1BP1LA0JNW5 1464 aa6□□□□□ -1.45
ERCC4-203ENST00000462862 SHANK2Q9UPX8 1470 aa6□□□□□ -1.45
ERCC4-203ENST00000462862 LRRIQ1Q96JM4 1722 aa5.99□□□□□ -1.45
ERCC4-203ENST00000462862 GCC2Q8IWJ2 1684 aa5.99□□□□□ -1.45
ERCC4-203ENST00000462862 PLEKHH2Q8IVE3 1493 aa5.99□□□□□ -1.45
ERCC4-203ENST00000462862 PLEKHD1A6NEE1 506 aa5.99□□□□□ -1.45
ERCC4-203ENST00000462862 ANKRD13DQ6ZTN6 518 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms