RNA–Protein interactions for RNA: ENST00000462527.2

EIF3A-202, Transcript of eukaryotic translation initiation factor 3 subunit A, humanhuman

TSL 2

Gene EIF3A, Length 1,192 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3A-202ENST00000462527 SMARCA4P51532 1647 aa12.34□□□□□ -0.43
EIF3A-202ENST00000462527 BMP2KQ9NSY1 1161 aaPredicted RBP12.34□□□□□ -0.43
EIF3A-202ENST00000462527 ATN1P54259 1190 aaPredicted RBP12.33□□□□□ -0.44
EIF3A-202ENST00000462527 IRF6O14896 467 aa12.32□□□□□ -0.44
EIF3A-202ENST00000462527 LHX8Q68G74 356 aa12.32□□□□□ -0.44
EIF3A-202ENST00000462527 POM121Q96HA1 1249 aa12.3□□□□□ -0.44
EIF3A-202ENST00000462527 SOX12O15370 315 aa12.29□□□□□ -0.44
EIF3A-202ENST00000462527 TTLL12Q14166 644 aaPredicted RBP12.29□□□□□ -0.44
EIF3A-202ENST00000462527 FBXO22Q8NEZ5 403 aa12.29□□□□□ -0.44
EIF3A-202ENST00000462527 CRISPLD2Q9H0B8 497 aa12.29□□□□□ -0.44
EIF3A-202ENST00000462527 PCDHB8Q9UN66 801 aa12.29□□□□□ -0.44
EIF3A-202ENST00000462527 ZNF330Q9Y3S2 320 aaPredicted RBP12.29□□□□□ -0.44
EIF3A-202ENST00000462527 BRD1O95696 1058 aa12.28□□□□□ -0.44
EIF3A-202ENST00000462527 CHMP4AQ9BY43 222 aa12.28□□□□□ -0.44
EIF3A-202ENST00000462527 BAZ1AQ9NRL2 1556 aaPredicted RBP12.27□□□□□ -0.44
EIF3A-202ENST00000462527 TTLL13PA6NNM8 815 aa12.27□□□□□ -0.45
EIF3A-202ENST00000462527 SPDYE16A6NNV3 312 aaPredicted RBP12.27□□□□□ -0.45
EIF3A-202ENST00000462527 GPR37O15354 613 aa12.27□□□□□ -0.45
EIF3A-202ENST00000462527 TIE1P35590 1138 aa12.27□□□□□ -0.45
EIF3A-202ENST00000462527 PSEN1P49768 467 aa12.27□□□□□ -0.45
EIF3A-202ENST00000462527 SH3D19Q5HYK7 790 aa12.27□□□□□ -0.45
EIF3A-202ENST00000462527 MROH2BQ7Z745 1585 aa12.26□□□□□ -0.45
EIF3A-202ENST00000462527 CCDC27Q2M243 656 aa12.26□□□□□ -0.45
EIF3A-202ENST00000462527 POTEB2H3BUK9 544 aa12.24□□□□□ -0.45
EIF3A-202ENST00000462527 METRNQ9UJH8 293 aa12.23□□□□□ -0.45
EIF3A-202ENST00000462527 ATP1B4Q9UN42 357 aaPredicted RBP12.22□□□□□ -0.45
EIF3A-202ENST00000462527 TMEM106CQ9BVX2 250 aa12.21□□□□□ -0.45
EIF3A-202ENST00000462527 COG6Q9Y2V7 657 aa12.21□□□□□ -0.45
EIF3A-202ENST00000462527 WIZO95785 1651 aa12.21□□□□□ -0.45
EIF3A-202ENST00000462527 SPDYE5A6NIY4 337 aa12.2□□□□□ -0.46
EIF3A-202ENST00000462527 WWC1Q8IX03 1113 aa12.2□□□□□ -0.46
EIF3A-202ENST00000462527 FAM177A1Q8N128 213 aaPredicted RBP12.2□□□□□ -0.46
EIF3A-202ENST00000462527 SLC39A7Q92504 469 aa12.2□□□□□ -0.46
EIF3A-202ENST00000462527 PHF8Q9UPP1 1060 aa12.2□□□□□ -0.46
EIF3A-202ENST00000462527 NUTM2FA1L443 756 aa12.19□□□□□ -0.46
EIF3A-202ENST00000462527 EFCAB3Q8N7B9 438 aa12.19□□□□□ -0.46
EIF3A-202ENST00000462527 TRIM35Q9UPQ4 493 aa12.19□□□□□ -0.46
EIF3A-202ENST00000462527 GNPATO15228 680 aa12.18□□□□□ -0.46
EIF3A-202ENST00000462527 C7P10643 843 aa12.18□□□□□ -0.46
EIF3A-202ENST00000462527 SKIV2LQ15477 1246 aaKnown RBP12.18□□□□□ -0.46
EIF3A-202ENST00000462527 GIGYF2Q6Y7W6 1299 aaKnown RBP12.18□□□□□ -0.46
EIF3A-202ENST00000462527 USTQ9Y2C2 406 aa12.18□□□□□ -0.46
EIF3A-202ENST00000462527 ATAD2BQ9ULI0 1458 aa12.16□□□□□ -0.46
EIF3A-202ENST00000462527 POTEFA5A3E0 1075 aa12.16□□□□□ -0.46
EIF3A-202ENST00000462527 CALR3Q96L12 384 aaKnown RBP12.16□□□□□ -0.46
EIF3A-202ENST00000462527 PEG3Q9GZU2 1588 aa12.16□□□□□ -0.46
EIF3A-202ENST00000462527 MS4A1P11836 297 aa12.15□□□□□ -0.46
EIF3A-202ENST00000462527 SMARCA2P51531 1590 aa12.14□□□□□ -0.47
EIF3A-202ENST00000462527 PDIA6Q15084 440 aa12.14□□□□□ -0.47
EIF3A-202ENST00000462527 CSB-PGBD3P0DP91 1061 aa12.13□□□□□ -0.47
EIF3A-202ENST00000462527 HIC1Q14526 733 aa12.13□□□□□ -0.47
EIF3A-202ENST00000462527 COLQQ9Y215 455 aaPredicted RBP12.13□□□□□ -0.47
EIF3A-202ENST00000462527 DPYSL4O14531 572 aa12.12□□□□□ -0.47
EIF3A-202ENST00000462527 POTEJP0CG39 1038 aa12.12□□□□□ -0.47
EIF3A-202ENST00000462527 CANXP27824 592 aaKnown RBP12.12□□□□□ -0.47
EIF3A-202ENST00000462527 SND1Q7KZF4 910 aaKnown RBP eCLIP12.12□□□□□ -0.472e-7■□□□□ 11.1
EIF3A-202ENST00000462527 HMGXB3Q12766 1538 aa12.11□□□□□ -0.47
EIF3A-202ENST00000462527 CABP2Q9NPB3 220 aa12.11□□□□□ -0.47
EIF3A-202ENST00000462527 BANK1Q8NDB2 785 aa12.1□□□□□ -0.47
EIF3A-202ENST00000462527 PBXIP1Q96AQ6 731 aa12.1□□□□□ -0.47
EIF3A-202ENST00000462527 RSF1Q96T23 1441 aaPredicted RBP12.1□□□□□ -0.47
EIF3A-202ENST00000462527 NCAPD3P42695 1498 aa12.08□□□□□ -0.47
EIF3A-202ENST00000462527 BAZ1BQ9UIG0 1483 aaKnown RBP12.08□□□□□ -0.47
EIF3A-202ENST00000462527 FCHSD2O94868 740 aa12.08□□□□□ -0.48
EIF3A-202ENST00000462527 PPP1R15BQ5SWA1 713 aa12.08□□□□□ -0.48
EIF3A-202ENST00000462527 OXER1Q8TDS5 423 aa12.08□□□□□ -0.48
EIF3A-202ENST00000462527 OTUD5Q96G74 571 aa12.08□□□□□ -0.48
EIF3A-202ENST00000462527 IVNS1ABPQ9Y6Y0 642 aa12.08□□□□□ -0.48
EIF3A-202ENST00000462527 CCDC125Q86Z20 511 aa12.06□□□□□ -0.48
EIF3A-202ENST00000462527 SEC24BO95487 1268 aa12.05□□□□□ -0.48
EIF3A-202ENST00000462527 POLR3GLQ9BT43 218 aa12.05□□□□□ -0.48
EIF3A-202ENST00000462527 PPM1GO15355 546 aaPredicted RBP12.04□□□□□ -0.48
EIF3A-202ENST00000462527 IER5LQ5T953 404 aa12.04□□□□□ -0.48
EIF3A-202ENST00000462527 PRM3Q9NNZ6 103 aa12.04□□□□□ -0.48
EIF3A-202ENST00000462527 PROCA1Q8NCQ7 364 aaPredicted RBP12.03□□□□□ -0.48
EIF3A-202ENST00000462527 RBM47A0AV96 593 aaKnown RBP12.01□□□□□ -0.49
EIF3A-202ENST00000462527 GRXCR2A6NFK2 248 aa12.01□□□□□ -0.49
EIF3A-202ENST00000462527 CLCN1P35523 988 aa12.01□□□□□ -0.49
EIF3A-202ENST00000462527 GLMNQ92990 594 aa12.01□□□□□ -0.49
EIF3A-202ENST00000462527 IGSF5Q9NSI5 407 aa12.01□□□□□ -0.49
EIF3A-202ENST00000462527 TOP2AP11388 1531 aaKnown RBP12.01□□□□□ -0.49
EIF3A-202ENST00000462527 UNCXA6NJT0 531 aa12□□□□□ -0.49
EIF3A-202ENST00000462527 IRX5P78411 483 aaPredicted RBP12□□□□□ -0.49
EIF3A-202ENST00000462527 SNRKQ9NRH2 765 aa12□□□□□ -0.49
EIF3A-202ENST00000462527 FECHP22830 423 aa11.99□□□□□ -0.49
EIF3A-202ENST00000462527 GOLGA2Q08379 1002 aa11.99□□□□□ -0.49
EIF3A-202ENST00000462527 TMEM259Q4ZIN3 620 aa11.99□□□□□ -0.49
EIF3A-202ENST00000462527 EMILIN3Q9NT22 766 aa11.99□□□□□ -0.49
EIF3A-202ENST00000462527 TBC1D12O60347 775 aa11.98□□□□□ -0.49
EIF3A-202ENST00000462527 POLR3EQ9NVU0 708 aa11.98□□□□□ -0.49
EIF3A-202ENST00000462527 REPIN1Q9BWE0 567 aaKnown RBP11.97□□□□□ -0.49
EIF3A-202ENST00000462527 GDPD2Q9HCC8 539 aa11.97□□□□□ -0.49
EIF3A-202ENST00000462527 GPHNQ9NQX3 736 aaPredicted RBP11.97□□□□□ -0.49
EIF3A-202ENST00000462527 PLCG2P16885 1265 aa11.96□□□□□ -0.49
EIF3A-202ENST00000462527 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.95□□□□□ -0.5
EIF3A-202ENST00000462527 VRTNQ9H8Y1 702 aa11.95□□□□□ -0.5
EIF3A-202ENST00000462527 SSTR3P32745 418 aaPredicted RBP11.94□□□□□ -0.5
EIF3A-202ENST00000462527 MS4A4AQ96JQ5 239 aa11.94□□□□□ -0.5
EIF3A-202ENST00000462527 GPCPD1Q9NPB8 672 aa11.94□□□□□ -0.5
EIF3A-202ENST00000462527 RFX1P22670 979 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms