RNA–Protein interactions for RNA: ENST00000462279.5

ERCC8-204, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 3,424 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-204ENST00000462279 TOPBP1Q92547 1522 aa10.47□□□□□ -0.73
ERCC8-204ENST00000462279 POLA1P09884 1462 aaPredicted RBP10.46□□□□□ -0.73
ERCC8-204ENST00000462279 EHBP1L1Q8N3D4 1523 aa10.46□□□□□ -0.73
ERCC8-204ENST00000462279 SPRYD3Q8NCJ5 442 aa10.46□□□□□ -0.73
ERCC8-204ENST00000462279 KDM2BQ8NHM5 1336 aa10.45□□□□□ -0.74
ERCC8-204ENST00000462279 CADPSQ9ULU8 1353 aa10.45□□□□□ -0.74
ERCC8-204ENST00000462279 HSP90AA1P07900 732 aaKnown RBP10.45□□□□□ -0.74
ERCC8-204ENST00000462279 L1TD1Q5T7N2 865 aaKnown RBP10.45□□□□□ -0.74
ERCC8-204ENST00000462279 ZNF777Q9ULD5 760 aaPredicted RBP10.43□□□□□ -0.74
ERCC8-204ENST00000462279 PANK2Q9BZ23 570 aa10.43□□□□□ -0.74
ERCC8-204ENST00000462279 BECN1Q14457 450 aa10.42□□□□□ -0.74
ERCC8-204ENST00000462279 SEC24BO95487 1268 aa10.42□□□□□ -0.74
ERCC8-204ENST00000462279 ADCY10Q96PN6 1610 aa10.42□□□□□ -0.74
ERCC8-204ENST00000462279 ADGBQ8N7X0 1667 aa10.41□□□□□ -0.74
ERCC8-204ENST00000462279 MBD5Q9P267 1494 aa10.41□□□□□ -0.74
ERCC8-204ENST00000462279 GOLGA6L3A6NEY3 463 aa10.41□□□□□ -0.74
ERCC8-204ENST00000462279 XRCC6P12956 609 aaKnown RBP eCLIP10.4□□□□□ -0.74
ERCC8-204ENST00000462279 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.4□□□□□ -0.74
ERCC8-204ENST00000462279 DNMT1P26358 1616 aaKnown RBP10.4□□□□□ -0.74
ERCC8-204ENST00000462279 ADAMTS8Q9UP79 889 aa10.4□□□□□ -0.74
ERCC8-204ENST00000462279 URB2Q14146 1524 aaKnown RBP10.4□□□□□ -0.74
ERCC8-204ENST00000462279 TDRD9Q8NDG6 1382 aaKnown RBP10.39□□□□□ -0.75
ERCC8-204ENST00000462279 WDR62O43379 1518 aa10.39□□□□□ -0.75
ERCC8-204ENST00000462279 FANCD2Q9BXW9 1451 aa10.39□□□□□ -0.75
ERCC8-204ENST00000462279 DAPK1P53355 1430 aa10.39□□□□□ -0.75
ERCC8-204ENST00000462279 NESP48681 1621 aa10.39□□□□□ -0.75
ERCC8-204ENST00000462279 KDM5CP41229 1560 aa10.38□□□□□ -0.75
ERCC8-204ENST00000462279 CDK13Q14004 1512 aaKnown RBP10.38□□□□□ -0.75
ERCC8-204ENST00000462279 WDR43Q15061 677 aaKnown RBP eCLIP10.38□□□□□ -0.75
ERCC8-204ENST00000462279 RGL3Q3MIN7 710 aa10.38□□□□□ -0.75
ERCC8-204ENST00000462279 ABCC5O15440 1437 aa10.37□□□□□ -0.75
ERCC8-204ENST00000462279 RRP9O43818 475 aaKnown RBP10.37□□□□□ -0.75
ERCC8-204ENST00000462279 PANK3Q9H999 370 aa10.37□□□□□ -0.75
ERCC8-204ENST00000462279 PARD3Q8TEW0 1356 aa10.37□□□□□ -0.75
ERCC8-204ENST00000462279 IGHDP01880 384 aa10.36□□□□□ -0.75
ERCC8-204ENST00000462279 DUSP27Q5VZP5 1158 aa10.36□□□□□ -0.75
ERCC8-204ENST00000462279 USP19O94966 1318 aa10.36□□□□□ -0.75
ERCC8-204ENST00000462279 ADAMTS12P58397 1594 aa10.36□□□□□ -0.75
ERCC8-204ENST00000462279 BCAR3O75815 825 aa10.36□□□□□ -0.75
ERCC8-204ENST00000462279 GOLGA2Q08379 1002 aa10.36□□□□□ -0.75
ERCC8-204ENST00000462279 CANXP27824 592 aaKnown RBP10.36□□□□□ -0.75
ERCC8-204ENST00000462279 CLCN1P35523 988 aa10.36□□□□□ -0.75
ERCC8-204ENST00000462279 UPF2Q9HAU5 1272 aaKnown RBP10.36□□□□□ -0.75
ERCC8-204ENST00000462279 KIAA1107Q9UPP5 1409 aa10.36□□□□□ -0.75
ERCC8-204ENST00000462279 PZPP20742 1482 aa10.35□□□□□ -0.75
ERCC8-204ENST00000462279 CCDC146Q8IYE0 955 aa10.35□□□□□ -0.75
ERCC8-204ENST00000462279 ROCK1Q13464 1354 aa10.35□□□□□ -0.75
ERCC8-204ENST00000462279 PER1O15534 1290 aaPredicted RBP10.35□□□□□ -0.75
ERCC8-204ENST00000462279 NBPF1Q3BBV0 1214 aa10.34□□□□□ -0.75
ERCC8-204ENST00000462279 CFDP1Q9UEE9 299 aaPredicted RBP10.34□□□□□ -0.75
ERCC8-204ENST00000462279 EPRSP07814 1512 aaKnown RBP10.34□□□□□ -0.75
ERCC8-204ENST00000462279 PLEKHH1Q9ULM0 1364 aa10.34□□□□□ -0.75
ERCC8-204ENST00000462279 MYH16Q9H6N6 1097 aa10.33□□□□□ -0.76
ERCC8-204ENST00000462279 KIF14Q15058 1648 aa10.33□□□□□ -0.76
ERCC8-204ENST00000462279 NUP155O75694 1391 aa10.33□□□□□ -0.76
ERCC8-204ENST00000462279 TBC1D2Q9BYX2 928 aa10.33□□□□□ -0.76
ERCC8-204ENST00000462279 TRIM44Q96DX7 344 aaPredicted RBP10.32□□□□□ -0.76
ERCC8-204ENST00000462279 COG6Q9Y2V7 657 aa10.32□□□□□ -0.76
ERCC8-204ENST00000462279 RALGAPBQ86X10 1494 aa10.32□□□□□ -0.76
ERCC8-204ENST00000462279 MCM4P33991 863 aa10.32□□□□□ -0.76
ERCC8-204ENST00000462279 TRAK2O60296 914 aa10.32□□□□□ -0.76
ERCC8-204ENST00000462279 ERCC6L2Q5T890 1561 aa10.32□□□□□ -0.76
ERCC8-204ENST00000462279 ANTXR1Q9H6X2 564 aa10.32□□□□□ -0.76
ERCC8-204ENST00000462279 PANK1Q8TE04 598 aa10.31□□□□□ -0.76
ERCC8-204ENST00000462279 CDC42BPAQ5VT25 1732 aa10.31□□□□□ -0.76
ERCC8-204ENST00000462279 ESPNB1AK53 854 aa10.31□□□□□ -0.76
ERCC8-204ENST00000462279 BLMP54132 1417 aaPredicted RBP10.3□□□□□ -0.76
ERCC8-204ENST00000462279 SPINK5Q9NQ38 1064 aaPredicted RBP10.3□□□□□ -0.76
ERCC8-204ENST00000462279 FSD2A1L4K1 749 aa10.29□□□□□ -0.76
ERCC8-204ENST00000462279 ZMYM4Q5VZL5 1548 aa10.29□□□□□ -0.76
ERCC8-204ENST00000462279 APAF1O14727 1248 aa10.29□□□□□ -0.76
ERCC8-204ENST00000462279 MAPK8IP3Q9UPT6 1336 aa10.29□□□□□ -0.76
ERCC8-204ENST00000462279 MRE11P49959 708 aa10.29□□□□□ -0.76
ERCC8-204ENST00000462279 ERBB4Q15303 1308 aa10.28□□□□□ -0.76
ERCC8-204ENST00000462279 SLFN5Q08AF3 891 aa10.28□□□□□ -0.76
ERCC8-204ENST00000462279 GRPEL1Q9HAV7 217 aa10.28□□□□□ -0.76
ERCC8-204ENST00000462279 KNSTRNQ9Y448 316 aa10.28□□□□□ -0.76
ERCC8-204ENST00000462279 CLUAP1Q96AJ1 413 aa10.28□□□□□ -0.76
ERCC8-204ENST00000462279 IQGAP2Q13576 1575 aa10.27□□□□□ -0.76
ERCC8-204ENST00000462279 DISP3Q9P2K9 1392 aa10.27□□□□□ -0.76
ERCC8-204ENST00000462279 KDM5DQ9BY66 1539 aa10.27□□□□□ -0.77
ERCC8-204ENST00000462279 CEP170Q5SW79 1584 aa10.27□□□□□ -0.77
ERCC8-204ENST00000462279 UHRF1BP1Q6BDS2 1440 aa10.27□□□□□ -0.77
ERCC8-204ENST00000462279 ARID3AQ99856 593 aa10.27□□□□□ -0.77
ERCC8-204ENST00000462279 PPP2R1AP30153 589 aa10.26□□□□□ -0.77
ERCC8-204ENST00000462279 MFAP1P55081 439 aaKnown RBP10.26□□□□□ -0.77
ERCC8-204ENST00000462279 NEUROD2Q15784 382 aa10.26□□□□□ -0.77
ERCC8-204ENST00000462279 TBC1D32Q96NH3 1257 aa10.26□□□□□ -0.77
ERCC8-204ENST00000462279 PODXL2Q9NZ53 605 aa10.26□□□□□ -0.77
ERCC8-204ENST00000462279 KIAA0556O60303 1618 aa10.26□□□□□ -0.77
ERCC8-204ENST00000462279 PLEKHH2Q8IVE3 1493 aa10.26□□□□□ -0.77
ERCC8-204ENST00000462279 KIAA0586Q9BVV6 1533 aa10.26□□□□□ -0.77
ERCC8-204ENST00000462279 ITSN2Q9NZM3 1697 aa10.26□□□□□ -0.77
ERCC8-204ENST00000462279 TMF1P82094 1093 aa10.26□□□□□ -0.77
ERCC8-204ENST00000462279 ANKRD50Q9ULJ7 1429 aa10.26□□□□□ -0.77
ERCC8-204ENST00000462279 LAMC1P11047 1609 aa10.25□□□□□ -0.77
ERCC8-204ENST00000462279 EIF3AQ14152 1382 aaKnown RBP10.25□□□□□ -0.77
ERCC8-204ENST00000462279 ANKRD30AQ9BXX3 1397 aa10.25□□□□□ -0.77
ERCC8-204ENST00000462279 CGNL1Q0VF96 1302 aa10.25□□□□□ -0.77
ERCC8-204ENST00000462279 RBM10P98175 930 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms