RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 NEO1Q92859 1461 aa17.62■□□□□ 0.41
COL4A6-204ENST00000461897 POGZQ7Z3K3 1410 aa17.62■□□□□ 0.41
COL4A6-204ENST00000461897 TEX14Q8IWB6 1497 aa17.61■□□□□ 0.41
COL4A6-204ENST00000461897 SUPT16HQ9Y5B9 1047 aaKnown RBP17.61■□□□□ 0.41
COL4A6-204ENST00000461897 DEPDC5O75140 1603 aa17.59■□□□□ 0.41
COL4A6-204ENST00000461897 HECW2Q9P2P5 1572 aa17.57■□□□□ 0.4
COL4A6-204ENST00000461897 EIF2AK4Q9P2K8 1649 aaKnown RBP17.56■□□□□ 0.4
COL4A6-204ENST00000461897 MLH3Q9UHC1 1453 aa17.55■□□□□ 0.4
COL4A6-204ENST00000461897 L3MBTL2Q969R5 705 aa17.55■□□□□ 0.4
COL4A6-204ENST00000461897 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.55■□□□□ 0.4
COL4A6-204ENST00000461897 RICTORQ6R327 1708 aa17.54■□□□□ 0.4
COL4A6-204ENST00000461897 PPRC1Q5VV67 1664 aaKnown RBP17.54■□□□□ 0.4
COL4A6-204ENST00000461897 DHX29Q7Z478 1369 aaKnown RBP17.54■□□□□ 0.4
COL4A6-204ENST00000461897 FAM69CQ0P6D2 419 aa17.52■□□□□ 0.4
COL4A6-204ENST00000461897 ABCA6Q8N139 1617 aa17.52■□□□□ 0.4
COL4A6-204ENST00000461897 MROH1Q8NDA8 1641 aa17.52■□□□□ 0.4
COL4A6-204ENST00000461897 FRMPD1Q5SYB0 1578 aa17.51■□□□□ 0.39
COL4A6-204ENST00000461897 VWDEQ8N2E2 1590 aa17.51■□□□□ 0.39
COL4A6-204ENST00000461897 PRDM15P57071 1507 aaPredicted RBP17.51■□□□□ 0.39
COL4A6-204ENST00000461897 MYT1LQ9UL68 1186 aa17.51■□□□□ 0.39
COL4A6-204ENST00000461897 PLA2R1Q13018 1463 aa17.5■□□□□ 0.39
COL4A6-204ENST00000461897 CCER2I3L3R5 266 aa17.5■□□□□ 0.39
COL4A6-204ENST00000461897 TSPOAP1O95153 1857 aa17.5■□□□□ 0.39
COL4A6-204ENST00000461897 KIF13AQ9H1H9 1805 aa17.5■□□□□ 0.39
COL4A6-204ENST00000461897 A2MP01023 1474 aa17.49■□□□□ 0.39
COL4A6-204ENST00000461897 E9PCH4 1651 aa17.48■□□□□ 0.39
COL4A6-204ENST00000461897 RAPGEF3O95398 923 aa17.48■□□□□ 0.39
COL4A6-204ENST00000461897 DDX10Q13206 875 aaKnown RBP17.48■□□□□ 0.39
COL4A6-204ENST00000461897 TET3O43151 1660 aa17.47■□□□□ 0.39
COL4A6-204ENST00000461897 RNF17Q9BXT8 1623 aaKnown RBP17.47■□□□□ 0.39
COL4A6-204ENST00000461897 ATP10AO60312 1499 aa17.46■□□□□ 0.39
COL4A6-204ENST00000461897 KIF3BO15066 747 aa17.46■□□□□ 0.39
COL4A6-204ENST00000461897 DIP2CQ9Y2E4 1556 aa17.46■□□□□ 0.39
COL4A6-204ENST00000461897 BCORL1Q5H9F3 1711 aa17.46■□□□□ 0.38
COL4A6-204ENST00000461897 CCDC144AA2RUR9 1427 aa17.44■□□□□ 0.38
COL4A6-204ENST00000461897 NBPF8Q3BBV2 869 aa17.44■□□□□ 0.38
COL4A6-204ENST00000461897 ZMYM4Q5VZL5 1548 aa17.43■□□□□ 0.38
COL4A6-204ENST00000461897 KANK1Q14678 1352 aa17.42■□□□□ 0.38
COL4A6-204ENST00000461897 SPHKAPQ2M3C7 1700 aa17.42■□□□□ 0.38
COL4A6-204ENST00000461897 HIRIP3Q9BW71 556 aaPredicted RBP17.4■□□□□ 0.38
COL4A6-204ENST00000461897 YEATS2Q9ULM3 1422 aa17.4■□□□□ 0.38
COL4A6-204ENST00000461897 CEP152O94986 1710 aa17.4■□□□□ 0.38
COL4A6-204ENST00000461897 TRPM2O94759 1503 aa17.4■□□□□ 0.38
COL4A6-204ENST00000461897 EFCAB6Q5THR3 1501 aa17.39■□□□□ 0.37
COL4A6-204ENST00000461897 LMTK2Q8IWU2 1503 aa17.39■□□□□ 0.37
COL4A6-204ENST00000461897 PTPRTO14522 1441 aa17.38■□□□□ 0.37
COL4A6-204ENST00000461897 UHRF1BP1Q6BDS2 1440 aa17.38■□□□□ 0.37
COL4A6-204ENST00000461897 ANP32CO43423 234 aa17.37■□□□□ 0.37
COL4A6-204ENST00000461897 CLTCL1P53675 1640 aa17.35■□□□□ 0.37
COL4A6-204ENST00000461897 RALGAPBQ86X10 1494 aa17.33■□□□□ 0.37
COL4A6-204ENST00000461897 HSPA5P11021 654 aaKnown RBP17.33■□□□□ 0.37
COL4A6-204ENST00000461897 TSHZ2Q9NRE2 1034 aa17.33■□□□□ 0.37
COL4A6-204ENST00000461897 ABCC3O15438 1527 aa17.32■□□□□ 0.36
COL4A6-204ENST00000461897 SPATA31E1Q6ZUB1 1445 aa17.32■□□□□ 0.36
COL4A6-204ENST00000461897 COL17A1Q9UMD9 1497 aaPredicted RBP17.32■□□□□ 0.36
COL4A6-204ENST00000461897 EIF4G2P78344 907 aaKnown RBP eCLIP17.31■□□□□ 0.36
COL4A6-204ENST00000461897 ZNF326Q5BKZ1 582 aaKnown RBP17.31■□□□□ 0.36
COL4A6-204ENST00000461897 DCAF11Q8TEB1 546 aa17.31■□□□□ 0.36
COL4A6-204ENST00000461897 GGT6Q6P531 493 aa17.3■□□□□ 0.36
COL4A6-204ENST00000461897 CAMSAP1Q5T5Y3 1602 aa17.29■□□□□ 0.36
COL4A6-204ENST00000461897 PRAG1Q86YV5 1406 aa17.29■□□□□ 0.36
COL4A6-204ENST00000461897 REREQ9P2R6 1566 aa17.29■□□□□ 0.36
COL4A6-204ENST00000461897 RGL3Q3MIN7 710 aa17.29■□□□□ 0.36
COL4A6-204ENST00000461897 KDM2AQ9Y2K7 1162 aa17.29■□□□□ 0.36
COL4A6-204ENST00000461897 NPATQ14207 1427 aa17.29■□□□□ 0.36
COL4A6-204ENST00000461897 UGGT1Q9NYU2 1555 aa17.29■□□□□ 0.36
COL4A6-204ENST00000461897 TRPM1Q7Z4N2 1603 aa17.28■□□□□ 0.36
COL4A6-204ENST00000461897 ZC3H13Q5T200 1668 aaKnown RBP17.28■□□□□ 0.36
COL4A6-204ENST00000461897 NEURL4Q96JN8 1562 aa17.26■□□□□ 0.35
COL4A6-204ENST00000461897 ARHGEF40Q8TER5 1519 aa17.25■□□□□ 0.35
COL4A6-204ENST00000461897 SIGLEC1Q9BZZ2 1709 aa17.25■□□□□ 0.35
COL4A6-204ENST00000461897 WASHC2CQ9Y4E1 1318 aa17.24■□□□□ 0.35
COL4A6-204ENST00000461897 USP47Q96K76 1375 aa17.24■□□□□ 0.35
COL4A6-204ENST00000461897 POLR1AO95602 1720 aaPredicted RBP17.23■□□□□ 0.35
COL4A6-204ENST00000461897 AGLP35573 1532 aa17.23■□□□□ 0.35
COL4A6-204ENST00000461897 KIF1BO60333 1816 aa17.23■□□□□ 0.35
COL4A6-204ENST00000461897 MROH2AA6NES4 1674 aa17.23■□□□□ 0.35
COL4A6-204ENST00000461897 FKBP8Q14318 412 aa17.22■□□□□ 0.35
COL4A6-204ENST00000461897 CFAP65Q6ZU64 1925 aaKnown RBP17.22■□□□□ 0.35
COL4A6-204ENST00000461897 WASHC2AQ641Q2 1341 aa17.22■□□□□ 0.35
COL4A6-204ENST00000461897 MADDQ8WXG6 1647 aa17.22■□□□□ 0.35
COL4A6-204ENST00000461897 CNTLNQ9NXG0 1405 aa17.21■□□□□ 0.35
COL4A6-204ENST00000461897 ARHGAP31Q2M1Z3 1444 aa17.21■□□□□ 0.34
COL4A6-204ENST00000461897 LAMC1P11047 1609 aa17.2■□□□□ 0.34
COL4A6-204ENST00000461897 ROCK2O75116 1388 aaKnown RBP17.2■□□□□ 0.34
COL4A6-204ENST00000461897 NOS1P29475 1434 aa17.19■□□□□ 0.34
COL4A6-204ENST00000461897 ADGRB3O60242 1522 aa17.19■□□□□ 0.34
COL4A6-204ENST00000461897 C11orf95C9JLR9 678 aaPredicted RBP17.19■□□□□ 0.34
COL4A6-204ENST00000461897 NEFLP07196 543 aa17.19■□□□□ 0.34
COL4A6-204ENST00000461897 CARD11Q9BXL7 1154 aa17.19■□□□□ 0.34
COL4A6-204ENST00000461897 IFT172Q9UG01 1749 aa17.19■□□□□ 0.34
COL4A6-204ENST00000461897 SYNMO15061 1565 aa17.19■□□□□ 0.34
COL4A6-204ENST00000461897 GPRASP1Q5JY77 1395 aa17.18■□□□□ 0.34
COL4A6-204ENST00000461897 PIK3C2BO00750 1634 aa17.17■□□□□ 0.34
COL4A6-204ENST00000461897 CCDC7Q96M83 1385 aa17.17■□□□□ 0.34
COL4A6-204ENST00000461897 NBPF1Q3BBV0 1214 aa17.15■□□□□ 0.34
COL4A6-204ENST00000461897 PREX1Q8TCU6 1659 aa17.15■□□□□ 0.34
COL4A6-204ENST00000461897 MYOM2P54296 1465 aa17.14■□□□□ 0.33
COL4A6-204ENST00000461897 KIF7Q2M1P5 1343 aa17.14■□□□□ 0.33
COL4A6-204ENST00000461897 CLTCQ00610 1675 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms