RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 EIF2AK4Q9P2K8 1649 aaKnown RBP23.56■■□□□ 1.36
DNMT3A-207ENST00000461228 NEURL4Q96JN8 1562 aa23.56■■□□□ 1.36
DNMT3A-207ENST00000461228 MAST1Q9Y2H9 1570 aa23.56■■□□□ 1.36
DNMT3A-207ENST00000461228 NCOA2Q15596 1464 aa23.56■■□□□ 1.36
DNMT3A-207ENST00000461228 DEPDC5O75140 1603 aa23.53■■□□□ 1.36
DNMT3A-207ENST00000461228 CPS1P31327 1500 aa23.52■■□□□ 1.36
DNMT3A-207ENST00000461228 NLRP1Q9C000 1473 aa23.51■■□□□ 1.35
DNMT3A-207ENST00000461228 RSPH4AQ5TD94 716 aa23.5■■□□□ 1.35
DNMT3A-207ENST00000461228 DISP3Q9P2K9 1392 aa23.49■■□□□ 1.35
DNMT3A-207ENST00000461228 MAP3K1Q13233 1512 aa23.48■■□□□ 1.35
DNMT3A-207ENST00000461228 TNRQ92752 1358 aa23.45■■□□□ 1.34
DNMT3A-207ENST00000461228 GGT6Q6P531 493 aa23.45■■□□□ 1.34
DNMT3A-207ENST00000461228 MED14O60244 1454 aa23.44■■□□□ 1.34
DNMT3A-207ENST00000461228 ZNF644Q9H582 1327 aaPredicted RBP23.44■■□□□ 1.34
DNMT3A-207ENST00000461228 ZNF335Q9H4Z2 1342 aaPredicted RBP23.43■■□□□ 1.34
DNMT3A-207ENST00000461228 SYNMO15061 1565 aa23.42■■□□□ 1.34
DNMT3A-207ENST00000461228 MROH1Q8NDA8 1641 aa23.41■■□□□ 1.34
DNMT3A-207ENST00000461228 NCKAP5LQ9HCH0 1330 aa23.41■■□□□ 1.34
DNMT3A-207ENST00000461228 LRRC9Q6ZRR7 1453 aa23.41■■□□□ 1.34
DNMT3A-207ENST00000461228 VPS8Q8N3P4 1428 aa23.41■■□□□ 1.34
DNMT3A-207ENST00000461228 VWDEQ8N2E2 1590 aa23.4■■□□□ 1.34
DNMT3A-207ENST00000461228 UGGT1Q9NYU2 1555 aa23.4■■□□□ 1.34
DNMT3A-207ENST00000461228 ABCC3O15438 1527 aa23.4■■□□□ 1.34
DNMT3A-207ENST00000461228 IQGAP1P46940 1657 aa23.4■■□□□ 1.34
DNMT3A-207ENST00000461228 CROCC2H7BZ55 1655 aa23.38■■□□□ 1.33
DNMT3A-207ENST00000461228 SOCS7O14512 581 aa23.38■■□□□ 1.33
DNMT3A-207ENST00000461228 MIA2Q96PC5 1412 aa23.37■■□□□ 1.33
DNMT3A-207ENST00000461228 SHANK2Q9UPX8 1470 aa23.36■■□□□ 1.33
DNMT3A-207ENST00000461228 PRDM15P57071 1507 aaPredicted RBP23.36■■□□□ 1.33
DNMT3A-207ENST00000461228 KIF3BO15066 747 aa23.32■■□□□ 1.32
DNMT3A-207ENST00000461228 ILDR2Q71H61 639 aa23.32■■□□□ 1.32
DNMT3A-207ENST00000461228 UBR1Q8IWV7 1749 aa23.32■■□□□ 1.32
DNMT3A-207ENST00000461228 DUOX2Q9NRD8 1548 aa23.32■■□□□ 1.32
DNMT3A-207ENST00000461228 ERVK-7P63135 1459 aa23.31■■□□□ 1.32
DNMT3A-207ENST00000461228 CEP152O94986 1710 aa23.31■■□□□ 1.32
DNMT3A-207ENST00000461228 KDM5AP29375 1690 aaKnown RBP23.31■■□□□ 1.32
DNMT3A-207ENST00000461228 MYOM3Q5VTT5 1437 aa23.3■■□□□ 1.32
DNMT3A-207ENST00000461228 WASHC2CQ9Y4E1 1318 aa23.3■■□□□ 1.32
DNMT3A-207ENST00000461228 NPHP4O75161 1426 aaPredicted RBP23.29■■□□□ 1.32
DNMT3A-207ENST00000461228 UBAP1LF5GYI3 381 aa23.28■■□□□ 1.32
DNMT3A-207ENST00000461228 ALKQ9UM73 1620 aa23.27■■□□□ 1.32
DNMT3A-207ENST00000461228 MED1Q15648 1581 aaPredicted RBP23.27■■□□□ 1.32
DNMT3A-207ENST00000461228 ERBINQ96RT1 1412 aa23.26■■□□□ 1.31
DNMT3A-207ENST00000461228 ARHGAP31Q2M1Z3 1444 aa23.25■■□□□ 1.31
DNMT3A-207ENST00000461228 TSPY4P0CV99 314 aa23.25■■□□□ 1.31
DNMT3A-207ENST00000461228 TSPY10P0CW01 314 aa23.25■■□□□ 1.31
DNMT3A-207ENST00000461228 THEMISQ8N1K5 641 aaPredicted RBP23.25■■□□□ 1.31
DNMT3A-207ENST00000461228 STRCP1A6NGW2 1772 aa23.24■■□□□ 1.31
DNMT3A-207ENST00000461228 SLIT1O75093 1534 aa23.24■■□□□ 1.31
DNMT3A-207ENST00000461228 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.24■■□□□ 1.31
DNMT3A-207ENST00000461228 FBXO31Q5XUX0 539 aaPredicted RBP23.23■■□□□ 1.31
DNMT3A-207ENST00000461228 ANKLE2Q86XL3 938 aa23.23■■□□□ 1.31
DNMT3A-207ENST00000461228 ARHGAP23Q9P227 1491 aa23.22■■□□□ 1.31
DNMT3A-207ENST00000461228 TOM1O60784 492 aa23.18■■□□□ 1.3
DNMT3A-207ENST00000461228 PTPN23Q9H3S7 1636 aa23.18■■□□□ 1.3
DNMT3A-207ENST00000461228 LMTK2Q8IWU2 1503 aa23.18■■□□□ 1.3
DNMT3A-207ENST00000461228 SCAF11Q99590 1463 aaKnown RBP23.17■■□□□ 1.3
DNMT3A-207ENST00000461228 LRRC7Q96NW7 1537 aa23.16■■□□□ 1.3
DNMT3A-207ENST00000461228 XIRP1Q702N8 1843 aaKnown RBP23.12■■□□□ 1.29
DNMT3A-207ENST00000461228 KIF15Q9NS87 1388 aa23.12■■□□□ 1.29
DNMT3A-207ENST00000461228 PIK3C2BO00750 1634 aa23.11■■□□□ 1.29
DNMT3A-207ENST00000461228 ABCC5O15440 1437 aa23.08■■□□□ 1.29
DNMT3A-207ENST00000461228 EFCAB6Q5THR3 1501 aa23.08■■□□□ 1.29
DNMT3A-207ENST00000461228 CFAP65Q6ZU64 1925 aaKnown RBP23.08■■□□□ 1.28
DNMT3A-207ENST00000461228 DAPK1P53355 1430 aa23.08■■□□□ 1.28
DNMT3A-207ENST00000461228 HSPA1LP34931 641 aa23.06■■□□□ 1.28
DNMT3A-207ENST00000461228 FGD6Q6ZV73 1430 aa23.05■■□□□ 1.28
DNMT3A-207ENST00000461228 ADGRL2O95490 1459 aa23.05■■□□□ 1.28
DNMT3A-207ENST00000461228 NWD1Q149M9 1564 aa23.04■■□□□ 1.28
DNMT3A-207ENST00000461228 ADGRB3O60242 1522 aa23.03■■□□□ 1.28
DNMT3A-207ENST00000461228 KANK4Q5T7N3 995 aaPredicted RBP23.02■■□□□ 1.28
DNMT3A-207ENST00000461228 RPRD2Q5VT52 1461 aaKnown RBP23.01■■□□□ 1.27
DNMT3A-207ENST00000461228 KANK1Q14678 1352 aa23■■□□□ 1.27
DNMT3A-207ENST00000461228 TMEM2Q9UHN6 1383 aa23■■□□□ 1.27
DNMT3A-207ENST00000461228 NKTRP30414 1462 aaKnown RBP22.99■■□□□ 1.27
DNMT3A-207ENST00000461228 PIP4K2BP78356 416 aa22.98■■□□□ 1.27
DNMT3A-207ENST00000461228 NOS1P29475 1434 aa22.98■■□□□ 1.27
DNMT3A-207ENST00000461228 TET3O43151 1660 aa22.97■■□□□ 1.27
DNMT3A-207ENST00000461228 SCAF1Q9H7N4 1312 aaKnown RBP22.97■■□□□ 1.27
DNMT3A-207ENST00000461228 ANKRD30AQ9BXX3 1397 aa22.96■■□□□ 1.27
DNMT3A-207ENST00000461228 GCC2Q8IWJ2 1684 aa22.94■■□□□ 1.26
DNMT3A-207ENST00000461228 UNC13BO14795 1591 aa22.92■■□□□ 1.26
DNMT3A-207ENST00000461228 FAM135BQ49AJ0 1406 aa22.91■■□□□ 1.26
DNMT3A-207ENST00000461228 EID1Q9Y6B2 187 aa22.9■■□□□ 1.26
DNMT3A-207ENST00000461228 LTKP29376 864 aa22.89■■□□□ 1.25
DNMT3A-207ENST00000461228 TXNDC2Q86VQ3 553 aa22.87■■□□□ 1.25
DNMT3A-207ENST00000461228 ROBO1Q9Y6N7 1651 aa22.87■■□□□ 1.25
DNMT3A-207ENST00000461228 CHD2O14647 1828 aaKnown RBP22.85■■□□□ 1.25
DNMT3A-207ENST00000461228 MYO5BQ9ULV0 1848 aa22.85■■□□□ 1.25
DNMT3A-207ENST00000461228 DIP2AQ14689 1571 aa22.84■■□□□ 1.25
DNMT3A-207ENST00000461228 RRP7BPQ9NSQ0 103 aa22.84■■□□□ 1.25
DNMT3A-207ENST00000461228 ZFYVE9O95405 1425 aa22.83■■□□□ 1.25
DNMT3A-207ENST00000461228 TMEM131LA2VDJ0 1609 aa22.83■■□□□ 1.25
DNMT3A-207ENST00000461228 APLP2Q06481 763 aa22.82■■□□□ 1.24
DNMT3A-207ENST00000461228 PHF23Q9BUL5 403 aaPredicted RBP22.81■■□□□ 1.24
DNMT3A-207ENST00000461228 SLC52A1Q9NWF4 448 aa22.81■■□□□ 1.24
DNMT3A-207ENST00000461228 ANKRD50Q9ULJ7 1429 aa22.81■■□□□ 1.24
DNMT3A-207ENST00000461228 TMEM94Q12767 1356 aa22.8■■□□□ 1.24
DNMT3A-207ENST00000461228 IQGAP3Q86VI3 1631 aa22.8■■□□□ 1.24
DNMT3A-207ENST00000461228 LOC105371045A0A1W2PR82 267 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms