RNA–Protein interactions for RNA: ENST00000461120.1

CHRD-209, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 683 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-209ENST00000461120 DIP2CQ9Y2E4 1556 aa21■□□□□ 0.95
CHRD-209ENST00000461120 ATP10AO60312 1499 aa20.98■□□□□ 0.95
CHRD-209ENST00000461120 PTPRKQ15262 1439 aa20.97■□□□□ 0.95
CHRD-209ENST00000461120 HSPA1LP34931 641 aa20.97■□□□□ 0.95
CHRD-209ENST00000461120 ITGAEP38570 1179 aa20.95■□□□□ 0.94
CHRD-209ENST00000461120 CHIC2Q9UKJ5 165 aa20.95■□□□□ 0.94
CHRD-209ENST00000461120 PLXNC1O60486 1568 aa20.94■□□□□ 0.94
CHRD-209ENST00000461120 ADGRL2O95490 1459 aa20.93■□□□□ 0.94
CHRD-209ENST00000461120 REREQ9P2R6 1566 aa20.93■□□□□ 0.94
CHRD-209ENST00000461120 NCOA1Q15788 1441 aa20.92■□□□□ 0.94
CHRD-209ENST00000461120 ADGBQ8N7X0 1667 aa20.92■□□□□ 0.94
CHRD-209ENST00000461120 A2MP01023 1474 aa20.91■□□□□ 0.94
CHRD-209ENST00000461120 ANKRD30AQ9BXX3 1397 aa20.91■□□□□ 0.94
CHRD-209ENST00000461120 TOM1O60784 492 aa20.9■□□□□ 0.94
CHRD-209ENST00000461120 PIP4K2BP78356 416 aa20.9■□□□□ 0.94
CHRD-209ENST00000461120 ESF1Q9H501 851 aaKnown RBP20.89■□□□□ 0.93
CHRD-209ENST00000461120 ROCK1Q13464 1354 aa20.88■□□□□ 0.93
CHRD-209ENST00000461120 DHX29Q7Z478 1369 aaKnown RBP20.88■□□□□ 0.93
CHRD-209ENST00000461120 KIF15Q9NS87 1388 aa20.88■□□□□ 0.93
CHRD-209ENST00000461120 ZNF335Q9H4Z2 1342 aaPredicted RBP20.88■□□□□ 0.93
CHRD-209ENST00000461120 RRP7BPQ9NSQ0 103 aa20.88■□□□□ 0.93
CHRD-209ENST00000461120 C3P01024 1663 aa20.87■□□□□ 0.93
CHRD-209ENST00000461120 DUOX2Q9NRD8 1548 aa20.86■□□□□ 0.93
CHRD-209ENST00000461120 AGLP35573 1532 aa20.85■□□□□ 0.93
CHRD-209ENST00000461120 CAMSAP1Q5T5Y3 1602 aa20.83■□□□□ 0.93
CHRD-209ENST00000461120 ERBINQ96RT1 1412 aa20.8■□□□□ 0.92
CHRD-209ENST00000461120 EIF2AK4Q9P2K8 1649 aaKnown RBP20.78■□□□□ 0.92
CHRD-209ENST00000461120 ANKRD50Q9ULJ7 1429 aa20.78■□□□□ 0.92
CHRD-209ENST00000461120 KIF3BO15066 747 aa20.77■□□□□ 0.92
CHRD-209ENST00000461120 PKD2Q13563 968 aa20.76■□□□□ 0.91
CHRD-209ENST00000461120 HFM1A2PYH4 1435 aa20.76■□□□□ 0.91
CHRD-209ENST00000461120 NAIPQ13075 1403 aa20.76■□□□□ 0.91
CHRD-209ENST00000461120 NCKAP5LQ9HCH0 1330 aa20.76■□□□□ 0.91
CHRD-209ENST00000461120 TRIM26Q12899 539 aaPredicted RBP20.75■□□□□ 0.91
CHRD-209ENST00000461120 GCC2Q8IWJ2 1684 aa20.74■□□□□ 0.91
CHRD-209ENST00000461120 RNF17Q9BXT8 1623 aaKnown RBP20.72■□□□□ 0.91
CHRD-209ENST00000461120 GGT6Q6P531 493 aa20.72■□□□□ 0.91
CHRD-209ENST00000461120 MROH1Q8NDA8 1641 aa20.69■□□□□ 0.9
CHRD-209ENST00000461120 DEPDC5O75140 1603 aa20.68■□□□□ 0.9
CHRD-209ENST00000461120 PPP6R1Q9UPN7 881 aa20.68■□□□□ 0.9
CHRD-209ENST00000461120 SETD5Q9C0A6 1442 aa20.66■□□□□ 0.9
CHRD-209ENST00000461120 CNTLNQ9NXG0 1405 aa20.66■□□□□ 0.9
CHRD-209ENST00000461120 CPS1P31327 1500 aa20.66■□□□□ 0.9
CHRD-209ENST00000461120 PRDM15P57071 1507 aaPredicted RBP20.66■□□□□ 0.9
CHRD-209ENST00000461120 PLA2R1Q13018 1463 aa20.65■□□□□ 0.9
CHRD-209ENST00000461120 UNC13BO14795 1591 aa20.64■□□□□ 0.9
CHRD-209ENST00000461120 NPATQ14207 1427 aa20.64■□□□□ 0.89
CHRD-209ENST00000461120 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.64■□□□□ 0.897e-8■□□□□ 8.3
CHRD-209ENST00000461120 FAM135AQ9P2D6 1515 aa20.63■□□□□ 0.89
CHRD-209ENST00000461120 KDM5DQ9BY66 1539 aa20.62■□□□□ 0.89
CHRD-209ENST00000461120 KANK1Q14678 1352 aa20.61■□□□□ 0.89
CHRD-209ENST00000461120 WASHC2CQ9Y4E1 1318 aa20.61■□□□□ 0.89
CHRD-209ENST00000461120 VWDEQ8N2E2 1590 aa20.61■□□□□ 0.89
CHRD-209ENST00000461120 RGS17Q9UGC6 210 aaPredicted RBP20.61■□□□□ 0.89
CHRD-209ENST00000461120 CLTCQ00610 1675 aaKnown RBP20.61■□□□□ 0.89
CHRD-209ENST00000461120 ABCC3O15438 1527 aa20.6■□□□□ 0.89
CHRD-209ENST00000461120 ZC3H13Q5T200 1668 aaKnown RBP20.59■□□□□ 0.89
CHRD-209ENST00000461120 RAB3GAP2Q9H2M9 1393 aa20.59■□□□□ 0.89
CHRD-209ENST00000461120 MROH2AA6NES4 1674 aa20.58■□□□□ 0.89
CHRD-209ENST00000461120 ZNF142P52746 1687 aaPredicted RBP20.58■□□□□ 0.89
CHRD-209ENST00000461120 CEP152O94986 1710 aa20.58■□□□□ 0.88
CHRD-209ENST00000461120 SENP3Q9H4L4 574 aaPredicted RBP20.57■□□□□ 0.88
CHRD-209ENST00000461120 NUP155O75694 1391 aa20.57■□□□□ 0.88
CHRD-209ENST00000461120 LMTK2Q8IWU2 1503 aa20.56■□□□□ 0.88
CHRD-209ENST00000461120 IQGAP3Q86VI3 1631 aa20.55■□□□□ 0.88
CHRD-209ENST00000461120 TRIM52Q96A61 297 aa20.54■□□□□ 0.88
CHRD-209ENST00000461120 ZMYM3Q14202 1370 aa20.54■□□□□ 0.88
CHRD-209ENST00000461120 ACIN1Q9UKV3 1341 aaKnown RBP20.53■□□□□ 0.88
CHRD-209ENST00000461120 HRCP23327 699 aa20.52■□□□□ 0.88
CHRD-209ENST00000461120 MYO3AQ8NEV4 1616 aa20.52■□□□□ 0.88
CHRD-209ENST00000461120 CEP170BQ9Y4F5 1589 aaPredicted RBP20.51■□□□□ 0.87
CHRD-209ENST00000461120 TET3O43151 1660 aa20.51■□□□□ 0.87
CHRD-209ENST00000461120 PCGF6Q9BYE7 350 aa20.5■□□□□ 0.87
CHRD-209ENST00000461120 EFCAB6Q5THR3 1501 aa20.49■□□□□ 0.87
CHRD-209ENST00000461120 POTEAQ6S8J7 498 aa20.49■□□□□ 0.87
CHRD-209ENST00000461120 ARHGAP31Q2M1Z3 1444 aa20.49■□□□□ 0.87
CHRD-209ENST00000461120 POLR1AO95602 1720 aaPredicted RBP20.49■□□□□ 0.87
CHRD-209ENST00000461120 PZPP20742 1482 aa20.49■□□□□ 0.87
CHRD-209ENST00000461120 SETD1AO15047 1707 aaKnown RBP20.47■□□□□ 0.87
CHRD-209ENST00000461120 FBXO31Q5XUX0 539 aaPredicted RBP20.44■□□□□ 0.86
CHRD-209ENST00000461120 SLC4A1APQ9BWU0 796 aaKnown RBP20.44■□□□□ 0.86
CHRD-209ENST00000461120 E9PCH4 1651 aa20.43■□□□□ 0.86
CHRD-209ENST00000461120 RPRD2Q5VT52 1461 aaKnown RBP20.43■□□□□ 0.86
CHRD-209ENST00000461120 MPHOSPH9Q99550 1183 aa20.42■□□□□ 0.86
CHRD-209ENST00000461120 ERVK-7P63135 1459 aa20.42■□□□□ 0.86
CHRD-209ENST00000461120 ALKQ9UM73 1620 aa20.42■□□□□ 0.86
CHRD-209ENST00000461120 CFAP65Q6ZU64 1925 aaKnown RBP20.39■□□□□ 0.86
CHRD-209ENST00000461120 NOS1P29475 1434 aa20.38■□□□□ 0.85
CHRD-209ENST00000461120 TNRQ92752 1358 aa20.38■□□□□ 0.85
CHRD-209ENST00000461120 SRCAPQ6ZRS2 3230 aa20.37■□□□□ 0.85
CHRD-209ENST00000461120 UPF1Q92900 1129 aaKnown RBP eCLIP20.36■□□□□ 0.85
CHRD-209ENST00000461120 SYNMO15061 1565 aa20.34■□□□□ 0.85
CHRD-209ENST00000461120 A2ML1A8K2U0 1454 aa20.34■□□□□ 0.85
CHRD-209ENST00000461120 FOXD1Q16676 465 aa20.33■□□□□ 0.85
CHRD-209ENST00000461120 SPHKAPQ2M3C7 1700 aa20.32■□□□□ 0.84
CHRD-209ENST00000461120 NEURL4Q96JN8 1562 aa20.31■□□□□ 0.84
CHRD-209ENST00000461120 ANKLE2Q86XL3 938 aa20.31■□□□□ 0.84
CHRD-209ENST00000461120 NLRP1Q9C000 1473 aa20.3■□□□□ 0.84
CHRD-209ENST00000461120 TRPM2O94759 1503 aa20.28■□□□□ 0.84
CHRD-209ENST00000461120 SLC52A1Q9NWF4 448 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms