RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 DUOX2Q9NRD8 1548 aa15.66■□□□□ 0.1
IFT88-204ENST00000461115 MAGI2Q86UL8 1455 aa15.66■□□□□ 0.1
IFT88-204ENST00000461115 KCNH8Q96L42 1107 aa15.66■□□□□ 0.1
IFT88-204ENST00000461115 ATF5Q9Y2D1 282 aaPredicted RBP15.64■□□□□ 0.09
IFT88-204ENST00000461115 TEX14Q8IWB6 1497 aa15.64■□□□□ 0.09
IFT88-204ENST00000461115 ERBINQ96RT1 1412 aa15.63■□□□□ 0.09
IFT88-204ENST00000461115 INO80Q9ULG1 1556 aaPredicted RBP15.62■□□□□ 0.09
IFT88-204ENST00000461115 IQGAP3Q86VI3 1631 aa15.62■□□□□ 0.09
IFT88-204ENST00000461115 TRAPPC8Q9Y2L5 1435 aa15.62■□□□□ 0.09
IFT88-204ENST00000461115 FANCAO15360 1455 aa15.62■□□□□ 0.09
IFT88-204ENST00000461115 ZFYVE16Q7Z3T8 1539 aa15.61■□□□□ 0.09
IFT88-204ENST00000461115 CFAP74Q9C0B2 1584 aa15.61■□□□□ 0.09
IFT88-204ENST00000461115 ATXN8OSP0DMR3 200 aa15.6■□□□□ 0.09
IFT88-204ENST00000461115 FAM135AQ9P2D6 1515 aa15.6■□□□□ 0.09
IFT88-204ENST00000461115 NUP155O75694 1391 aa15.59■□□□□ 0.09
IFT88-204ENST00000461115 DEPDC5O75140 1603 aa15.57■□□□□ 0.08
IFT88-204ENST00000461115 NPM1P06748 294 aaKnown RBP eCLIP15.57■□□□□ 0.08
IFT88-204ENST00000461115 ATP10AO60312 1499 aa15.56■□□□□ 0.08
IFT88-204ENST00000461115 ADGRL1O94910 1474 aa15.55■□□□□ 0.08
IFT88-204ENST00000461115 ATP7AQ04656 1500 aa15.55■□□□□ 0.08
IFT88-204ENST00000461115 GLI2P10070 1586 aa15.55■□□□□ 0.08
IFT88-204ENST00000461115 PKD2Q13563 968 aa15.55■□□□□ 0.08
IFT88-204ENST00000461115 RIMBP3CA6NJZ7 1639 aa15.55■□□□□ 0.08
IFT88-204ENST00000461115 RIMBP3BA6NNM3 1639 aa15.55■□□□□ 0.08
IFT88-204ENST00000461115 EIF2AK4Q9P2K8 1649 aaKnown RBP15.55■□□□□ 0.08
IFT88-204ENST00000461115 RIMBP3Q9UFD9 1639 aa15.55■□□□□ 0.08
IFT88-204ENST00000461115 KDM5CP41229 1560 aa15.54■□□□□ 0.08
IFT88-204ENST00000461115 L3MBTL2Q969R5 705 aa15.53■□□□□ 0.08
IFT88-204ENST00000461115 SCAPERQ9BY12 1400 aa15.52■□□□□ 0.08
IFT88-204ENST00000461115 VWDEQ8N2E2 1590 aa15.52■□□□□ 0.08
IFT88-204ENST00000461115 SPAG9O60271 1321 aaKnown RBP15.51■□□□□ 0.07
IFT88-204ENST00000461115 NEO1Q92859 1461 aa15.51■□□□□ 0.07
IFT88-204ENST00000461115 KIDINS220Q9ULH0 1771 aa15.51■□□□□ 0.07
IFT88-204ENST00000461115 MAP3K4Q9Y6R4 1608 aa15.51■□□□□ 0.07
IFT88-204ENST00000461115 UHRF1BP1Q6BDS2 1440 aa15.51■□□□□ 0.07
IFT88-204ENST00000461115 CD109Q6YHK3 1445 aa15.51■□□□□ 0.07
IFT88-204ENST00000461115 ZBTB12Q9Y330 459 aaPredicted RBP15.51■□□□□ 0.07
IFT88-204ENST00000461115 BCORL1Q5H9F3 1711 aa15.5■□□□□ 0.07
IFT88-204ENST00000461115 ZNF518AQ6AHZ1 1483 aa15.5■□□□□ 0.07
IFT88-204ENST00000461115 MLH3Q9UHC1 1453 aa15.48■□□□□ 0.07
IFT88-204ENST00000461115 AFAP1Q8N556 730 aa15.48■□□□□ 0.07
IFT88-204ENST00000461115 RBM42Q9BTD8 480 aaKnown RBP15.48■□□□□ 0.07
IFT88-204ENST00000461115 PLA2R1Q13018 1463 aa15.48■□□□□ 0.07
IFT88-204ENST00000461115 POGZQ7Z3K3 1410 aa15.47■□□□□ 0.07
IFT88-204ENST00000461115 DHX29Q7Z478 1369 aaKnown RBP15.47■□□□□ 0.07
IFT88-204ENST00000461115 PRDM15P57071 1507 aaPredicted RBP15.46■□□□□ 0.07
IFT88-204ENST00000461115 TET3O43151 1660 aa15.45■□□□□ 0.06
IFT88-204ENST00000461115 MIER1Q8N108 512 aa15.45■□□□□ 0.06
IFT88-204ENST00000461115 MROH1Q8NDA8 1641 aa15.45■□□□□ 0.06
IFT88-204ENST00000461115 POLR1AO95602 1720 aaPredicted RBP15.45■□□□□ 0.06
IFT88-204ENST00000461115 RNF17Q9BXT8 1623 aaKnown RBP15.44■□□□□ 0.06
IFT88-204ENST00000461115 SPATA31E1Q6ZUB1 1445 aa15.44■□□□□ 0.06
IFT88-204ENST00000461115 NBPF8Q3BBV2 869 aa15.43■□□□□ 0.06
IFT88-204ENST00000461115 E9PCH4 1651 aa15.43■□□□□ 0.06
IFT88-204ENST00000461115 HECW2Q9P2P5 1572 aa15.43■□□□□ 0.06
IFT88-204ENST00000461115 NEURL4Q96JN8 1562 aa15.42■□□□□ 0.06
IFT88-204ENST00000461115 PTPRTO14522 1441 aa15.42■□□□□ 0.06
IFT88-204ENST00000461115 LMTK2Q8IWU2 1503 aa15.42■□□□□ 0.06
IFT88-204ENST00000461115 RICTORQ6R327 1708 aa15.42■□□□□ 0.06
IFT88-204ENST00000461115 RALGAPBQ86X10 1494 aa15.41■□□□□ 0.06
IFT88-204ENST00000461115 DIP2BQ9P265 1576 aa15.41■□□□□ 0.06
IFT88-204ENST00000461115 CCDC144AA2RUR9 1427 aa15.39■□□□□ 0.05
IFT88-204ENST00000461115 FRMPD1Q5SYB0 1578 aa15.39■□□□□ 0.05
IFT88-204ENST00000461115 SPHKAPQ2M3C7 1700 aa15.39■□□□□ 0.05
IFT88-204ENST00000461115 TRPM2O94759 1503 aa15.39■□□□□ 0.05
IFT88-204ENST00000461115 EIF4G2P78344 907 aaKnown RBP eCLIP15.38■□□□□ 0.05
IFT88-204ENST00000461115 A2MP01023 1474 aa15.38■□□□□ 0.05
IFT88-204ENST00000461115 ABCA6Q8N139 1617 aa15.37■□□□□ 0.05
IFT88-204ENST00000461115 CEP152O94986 1710 aa15.36■□□□□ 0.05
IFT88-204ENST00000461115 HSPA5P11021 654 aaKnown RBP15.36■□□□□ 0.05
IFT88-204ENST00000461115 CYB5RLQ6IPT4 315 aa15.36■□□□□ 0.05
IFT88-204ENST00000461115 PPRC1Q5VV67 1664 aaKnown RBP15.36■□□□□ 0.05
IFT88-204ENST00000461115 LAMC1P11047 1609 aa15.35■□□□□ 0.05
IFT88-204ENST00000461115 EFCAB6Q5THR3 1501 aa15.34■□□□□ 0.05
IFT88-204ENST00000461115 ZMYM4Q5VZL5 1548 aa15.34■□□□□ 0.05
IFT88-204ENST00000461115 TRPM1Q7Z4N2 1603 aa15.34■□□□□ 0.05
IFT88-204ENST00000461115 DIP2CQ9Y2E4 1556 aa15.33■□□□□ 0.05
IFT88-204ENST00000461115 KANK1Q14678 1352 aa15.33■□□□□ 0.04
IFT88-204ENST00000461115 GPRASP1Q5JY77 1395 aa15.32■□□□□ 0.04
IFT88-204ENST00000461115 PRAG1Q86YV5 1406 aa15.31■□□□□ 0.04
IFT88-204ENST00000461115 STAC3Q96MF2 364 aa15.31■□□□□ 0.04
IFT88-204ENST00000461115 DDX10Q13206 875 aaKnown RBP15.3■□□□□ 0.04
IFT88-204ENST00000461115 WASHC2AQ641Q2 1341 aa15.3■□□□□ 0.04
IFT88-204ENST00000461115 CLTCL1P53675 1640 aa15.3■□□□□ 0.04
IFT88-204ENST00000461115 KIF3BO15066 747 aa15.29■□□□□ 0.04
IFT88-204ENST00000461115 ARID4BQ4LE39 1312 aaPredicted RBP15.29■□□□□ 0.04
IFT88-204ENST00000461115 KIF13AQ9H1H9 1805 aa15.29■□□□□ 0.04
IFT88-204ENST00000461115 REREQ9P2R6 1566 aa15.28■□□□□ 0.04
IFT88-204ENST00000461115 HIRIP3Q9BW71 556 aaPredicted RBP15.28■□□□□ 0.04
IFT88-204ENST00000461115 CCDC7Q96M83 1385 aa15.27■□□□□ 0.04
IFT88-204ENST00000461115 ZC3H13Q5T200 1668 aaKnown RBP15.27■□□□□ 0.03
IFT88-204ENST00000461115 USP47Q96K76 1375 aa15.26■□□□□ 0.03
IFT88-204ENST00000461115 KIF1BO60333 1816 aa15.25■□□□□ 0.03
IFT88-204ENST00000461115 KIAA1210Q9ULL0 1709 aa15.25■□□□□ 0.03
IFT88-204ENST00000461115 DCAF11Q8TEB1 546 aa15.25■□□□□ 0.03
IFT88-204ENST00000461115 ABCC3O15438 1527 aa15.25■□□□□ 0.03
IFT88-204ENST00000461115 IFT172Q9UG01 1749 aa15.24■□□□□ 0.03
IFT88-204ENST00000461115 MADDQ8WXG6 1647 aa15.24■□□□□ 0.03
IFT88-204ENST00000461115 CCER2I3L3R5 266 aa15.24■□□□□ 0.03
IFT88-204ENST00000461115 CENPBP07199 599 aaPredicted RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms