RNA–Protein interactions for RNA: ENST00000461044.5

FXR1-204, Transcript of FMR1 autosomal homolog 1, human

TSL 4

Gene FXR1, Length 601 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-204	ENST00000461044	MMRN1	Q13201	1228 aa		6.95	□□□□□ -1.3
FXR1-204	ENST00000461044	GRXCR2	A6NFK2	248 aa		6.94	□□□□□ -1.3
FXR1-204	ENST00000461044	FBXW7	Q969H0	707 aa		6.94	□□□□□ -1.3
FXR1-204	ENST00000461044	HR	O43593	1189 aa		6.93	□□□□□ -1.3
FXR1-204	ENST00000461044	PTPRE	P23469	700 aa		6.93	□□□□□ -1.3
FXR1-204	ENST00000461044	NBR1	Q14596	966 aa		6.93	□□□□□ -1.3
FXR1-204	ENST00000461044	C6orf132	Q5T0Z8	1188 aa		6.93	□□□□□ -1.3
FXR1-204	ENST00000461044	ADGRD1	Q6QNK2	874 aa		6.93	□□□□□ -1.3
FXR1-204	ENST00000461044	RBM33	Q96EV2	1170 aa	Known RBP	6.93	□□□□□ -1.3
FXR1-204	ENST00000461044	ZBED2	Q9BTP6	218 aa		6.93	□□□□□ -1.3
FXR1-204	ENST00000461044	TK2	O00142	265 aa		6.92	□□□□□ -1.3
FXR1-204	ENST00000461044	SEMA3E	O15041	775 aa		6.92	□□□□□ -1.3
FXR1-204	ENST00000461044	EN1	Q05925	392 aa	Predicted RBP	6.92	□□□□□ -1.3
FXR1-204	ENST00000461044	TSR1	Q2NL82	804 aa	Known RBP	6.92	□□□□□ -1.3
FXR1-204	ENST00000461044	P3H3	Q8IVL6	736 aa		6.92	□□□□□ -1.3
FXR1-204	ENST00000461044	SLC4A5	Q9BY07	1137 aa		6.92	□□□□□ -1.3
FXR1-204	ENST00000461044	VPS9D1	Q9Y2B5	631 aa		6.92	□□□□□ -1.3
FXR1-204	ENST00000461044	PRKCSH	P14314	528 aa	Predicted RBP	6.9	□□□□□ -1.3
FXR1-204	ENST00000461044	PPP1R3G	B7ZBB8	358 aa		6.89	□□□□□ -1.31
FXR1-204	ENST00000461044	BHMG1	C9JSJ3	638 aa	Predicted RBP	6.89	□□□□□ -1.31
FXR1-204	ENST00000461044	PROX2	Q3B8N5	592 aa		6.89	□□□□□ -1.31
FXR1-204	ENST00000461044	TESPA1	A2RU30	521 aa	Predicted RBP	6.88	□□□□□ -1.31
FXR1-204	ENST00000461044	CDHR5	Q9HBB8	845 aa		6.88	□□□□□ -1.31
FXR1-204	ENST00000461044	NPDC1	Q9NQX5	325 aa	Predicted RBP	6.88	□□□□□ -1.31
FXR1-204	ENST00000461044	MAP3K7	O43318	606 aa		6.87	□□□□□ -1.31
FXR1-204	ENST00000461044	FAM198A	Q9UFP1	575 aa		6.86	□□□□□ -1.31
FXR1-204	ENST00000461044	MYT1L	Q9UL68	1186 aa		6.86	□□□□□ -1.31
FXR1-204	ENST00000461044	KCNH8	Q96L42	1107 aa		6.85	□□□□□ -1.31
FXR1-204	ENST00000461044	C3orf80	F5H4A9	247 aa		6.84	□□□□□ -1.31
FXR1-204	ENST00000461044	TSKS	Q9UJT2	592 aa		6.84	□□□□□ -1.31
FXR1-204	ENST00000461044	TRIM6-TRIM34	B2RNG4	842 aa		6.83	□□□□□ -1.32
FXR1-204	ENST00000461044	ONECUT3	O60422	494 aa	Predicted RBP	6.83	□□□□□ -1.32
FXR1-204	ENST00000461044	RNF166	Q96A37	237 aa	Predicted RBP	6.83	□□□□□ -1.32
FXR1-204	ENST00000461044	KIAA1468	Q9P260	1216 aa		6.83	□□□□□ -1.32
FXR1-204	ENST00000461044	PRSS12	P56730	875 aa		6.82	□□□□□ -1.32
FXR1-204	ENST00000461044	CDCA7L	Q96GN5	454 aa		6.82	□□□□□ -1.32
FXR1-204	ENST00000461044	RABGEF1	Q9UJ41	708 aa		6.82	□□□□□ -1.32
FXR1-204	ENST00000461044	RBM26	Q5T8P6	1007 aa	Known RBP	6.81	□□□□□ -1.32
FXR1-204	ENST00000461044	TTC13	Q8NBP0	860 aa		6.81	□□□□□ -1.32
FXR1-204	ENST00000461044	PTGDR	Q13258	359 aa		6.8	□□□□□ -1.32
FXR1-204	ENST00000461044	CERK	Q8TCT0	537 aa		6.8	□□□□□ -1.32
FXR1-204	ENST00000461044	GPR37	O15354	613 aa		6.78	□□□□□ -1.32
FXR1-204	ENST00000461044	MRPL50	Q8N5N7	158 aa	Known RBP	6.78	□□□□□ -1.32
FXR1-204	ENST00000461044	NUTM2F	A1L443	756 aa		6.77	□□□□□ -1.33
FXR1-204	ENST00000461044	PADI6	Q6TGC4	694 aa		6.77	□□□□□ -1.33
FXR1-204	ENST00000461044	SEPT9	Q9UHD8	586 aa	Predicted RBP	6.77	□□□□□ -1.33
FXR1-204	ENST00000461044	SMAP	O00193	183 aa		6.76	□□□□□ -1.33
FXR1-204	ENST00000461044	LAPTM4B	Q86VI4	370 aa		6.76	□□□□□ -1.33
FXR1-204	ENST00000461044	KCTD12	Q96CX2	325 aa	Known RBP	6.76	□□□□□ -1.33
FXR1-204	ENST00000461044	RBM27	Q9P2N5	1060 aa	Known RBP	6.76	□□□□□ -1.33
FXR1-204	ENST00000461044	SMYD5	Q6GMV2	418 aa		6.75	□□□□□ -1.33
FXR1-204	ENST00000461044	PACS2	Q86VP3	889 aa		6.75	□□□□□ -1.33
FXR1-204	ENST00000461044	TATDN2	Q93075	761 aa		6.75	□□□□□ -1.33
FXR1-204	ENST00000461044	STAC3	Q96MF2	364 aa		6.75	□□□□□ -1.33
FXR1-204	ENST00000461044	NBPF3	Q9H094	633 aa		6.75	□□□□□ -1.33
FXR1-204	ENST00000461044	FECH	P22830	423 aa		6.74	□□□□□ -1.33
FXR1-204	ENST00000461044	NUDT18	Q6ZVK8	323 aa		6.74	□□□□□ -1.33
FXR1-204	ENST00000461044	ZFR	Q96KR1	1074 aa	Known RBP	6.74	□□□□□ -1.33
FXR1-204	ENST00000461044	FAM98C	Q17RN3	349 aa	Known RBP	6.73	□□□□□ -1.33
FXR1-204	ENST00000461044	THSD4	Q6ZMP0	1018 aa		6.73	□□□□□ -1.33
FXR1-204	ENST00000461044	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	6.73	□□□□□ -1.33
FXR1-204	ENST00000461044	WNT2B	Q93097	391 aa		6.73	□□□□□ -1.33
FXR1-204	ENST00000461044	BCAN	Q96GW7	911 aa		6.73	□□□□□ -1.33
FXR1-204	ENST00000461044	EYA1	Q99502	592 aa		6.73	□□□□□ -1.33
FXR1-204	ENST00000461044	PNMA3	Q9UL41	463 aa		6.73	□□□□□ -1.33
FXR1-204	ENST00000461044	FCHSD2	O94868	740 aa		6.72	□□□□□ -1.33
FXR1-204	ENST00000461044	FAM161A	Q3B820	660 aa		6.72	□□□□□ -1.33
FXR1-204	ENST00000461044	BCAM	P50895	628 aa		6.71	□□□□□ -1.34
FXR1-204	ENST00000461044	HCST	Q9UBK5	93 aa		6.71	□□□□□ -1.34
FXR1-204	ENST00000461044	ADGRG1	Q9Y653	693 aa		6.71	□□□□□ -1.34
FXR1-204	ENST00000461044	SOWAHB	A6NEL2	793 aa		6.7	□□□□□ -1.34
FXR1-204	ENST00000461044	GOLGA8CP	A6NN73	597 aa		6.7	□□□□□ -1.34
FXR1-204	ENST00000461044	NBPF26	B4DH59	902 aa		6.7	□□□□□ -1.34
FXR1-204	ENST00000461044	PTPN5	P54829	565 aa		6.7	□□□□□ -1.34
FXR1-204	ENST00000461044	HIC1	Q14526	733 aa		6.7	□□□□□ -1.34
FXR1-204	ENST00000461044	GNPAT	O15228	680 aa		6.68	□□□□□ -1.34
FXR1-204	ENST00000461044	SAMD7	Q7Z3H4	446 aa		6.68	□□□□□ -1.34
FXR1-204	ENST00000461044	GPIHBP1	Q8IV16	184 aa		6.68	□□□□□ -1.34
FXR1-204	ENST00000461044	ANKK1	Q8NFD2	765 aa		6.68	□□□□□ -1.34
FXR1-204	ENST00000461044	WBP1L	Q9NX94	342 aa		6.66	□□□□□ -1.34
FXR1-204	ENST00000461044	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	6.66	□□□□□ -1.34
FXR1-204	ENST00000461044	TPRN	Q4KMQ1	711 aa		6.65	□□□□□ -1.34
FXR1-204	ENST00000461044	SWT1	Q5T5J6	900 aa	Known RBP	6.65	□□□□□ -1.34
FXR1-204	ENST00000461044	LMOD2	Q6P5Q4	547 aa		6.65	□□□□□ -1.34
FXR1-204	ENST00000461044	PXYLP1	Q8TE99	480 aa		6.65	□□□□□ -1.34
FXR1-204	ENST00000461044	PHOX2B	Q99453	314 aa		6.65	□□□□□ -1.34
FXR1-204	ENST00000461044	RCCD1	A6NED2	376 aa		6.64	□□□□□ -1.35
FXR1-204	ENST00000461044	LRCH3	Q96II8	777 aa		6.64	□□□□□ -1.35
FXR1-204	ENST00000461044	METTL3	Q86U44	580 aa	Known RBP	6.63	□□□□□ -1.35
FXR1-204	ENST00000461044	RBM46	Q8TBY0	533 aa	Known RBP	6.63	□□□□□ -1.35
FXR1-204	ENST00000461044	TSR3	Q9UJK0	312 aa	Known RBP	6.63	□□□□□ -1.35
FXR1-204	ENST00000461044	HPS5	Q9UPZ3	1129 aa		6.63	□□□□□ -1.35
FXR1-204	ENST00000461044	OAT	P04181	439 aa		6.62	□□□□□ -1.35
FXR1-204	ENST00000461044	TMEM134	Q9H6X4	195 aa		6.62	□□□□□ -1.35
FXR1-204	ENST00000461044	TULP1	O00294	542 aa	Predicted RBP	6.61	□□□□□ -1.35
FXR1-204	ENST00000461044	DNAJB2	P25686	324 aa		6.61	□□□□□ -1.35
FXR1-204	ENST00000461044	ZC3H15	Q8WU90	426 aa	Known RBP	6.61	□□□□□ -1.35
FXR1-204	ENST00000461044	NLRP7	Q8WX94	980 aa		6.61	□□□□□ -1.35
FXR1-204	ENST00000461044	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	6.6	□□□□□ -1.35
FXR1-204	ENST00000461044	IRF6	O14896	467 aa		6.6	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 14 ms