RNA–Protein interactions for RNA: ENST00000460903.2

YIPF3-206, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 605 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-206ENST00000460903 DEPDC5O75140 1603 aa25.14■■□□□ 1.61
YIPF3-206ENST00000460903 IQGAP1P46940 1657 aa25.13■■□□□ 1.61
YIPF3-206ENST00000460903 PHF23Q9BUL5 403 aaPredicted RBP25.12■■□□□ 1.61
YIPF3-206ENST00000460903 RNF17Q9BXT8 1623 aaKnown RBP25.08■■□□□ 1.61
YIPF3-206ENST00000460903 PZPP20742 1482 aa25.08■■□□□ 1.6
YIPF3-206ENST00000460903 TNRQ92752 1358 aa25.07■■□□□ 1.6
YIPF3-206ENST00000460903 KDM5DQ9BY66 1539 aa25.07■■□□□ 1.6
YIPF3-206ENST00000460903 FBXO31Q5XUX0 539 aaPredicted RBP25.06■■□□□ 1.6
YIPF3-206ENST00000460903 CFDP1Q9UEE9 299 aaPredicted RBP25.06■■□□□ 1.6
YIPF3-206ENST00000460903 XIRP1Q702N8 1843 aaKnown RBP25.06■■□□□ 1.6
YIPF3-206ENST00000460903 MED14O60244 1454 aa25.06■■□□□ 1.6
YIPF3-206ENST00000460903 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.05■■□□□ 1.6
YIPF3-206ENST00000460903 SYNMO15061 1565 aa25.05■■□□□ 1.6
YIPF3-206ENST00000460903 TIAM1Q13009 1591 aa25.05■■□□□ 1.6
YIPF3-206ENST00000460903 MBD5Q9P267 1494 aa25.03■■□□□ 1.6
YIPF3-206ENST00000460903 UGGT1Q9NYU2 1555 aa25.03■■□□□ 1.6
YIPF3-206ENST00000460903 ZC3H13Q5T200 1668 aaKnown RBP25.03■■□□□ 1.6
YIPF3-206ENST00000460903 NPHP4O75161 1426 aaPredicted RBP25.03■■□□□ 1.6
YIPF3-206ENST00000460903 FAM135AQ9P2D6 1515 aa25.02■■□□□ 1.6
YIPF3-206ENST00000460903 CCNB3Q8WWL7 1395 aa25.02■■□□□ 1.6
YIPF3-206ENST00000460903 LRRC7Q96NW7 1537 aa25.01■■□□□ 1.59
YIPF3-206ENST00000460903 CFAP65Q6ZU64 1925 aaKnown RBP25■■□□□ 1.59
YIPF3-206ENST00000460903 RTEL1-TNFRSF6BF6WH68 1400 aa24.99■■□□□ 1.59
YIPF3-206ENST00000460903 ANKLE2Q86XL3 938 aa24.99■■□□□ 1.59
YIPF3-206ENST00000460903 SENP3Q9H4L4 574 aaPredicted RBP24.99■■□□□ 1.59
YIPF3-206ENST00000460903 ZNF644Q9H582 1327 aaPredicted RBP24.99■■□□□ 1.59
YIPF3-206ENST00000460903 NLRP1Q9C000 1473 aa24.98■■□□□ 1.59
YIPF3-206ENST00000460903 DHX29Q7Z478 1369 aaKnown RBP24.98■■□□□ 1.59
YIPF3-206ENST00000460903 RGS17Q9UGC6 210 aaPredicted RBP24.96■■□□□ 1.59
YIPF3-206ENST00000460903 MIA2Q96PC5 1412 aa24.95■■□□□ 1.58
YIPF3-206ENST00000460903 THEMISQ8N1K5 641 aaPredicted RBP24.93■■□□□ 1.58
YIPF3-206ENST00000460903 UBR1Q8IWV7 1749 aa24.92■■□□□ 1.58
YIPF3-206ENST00000460903 KIF3BO15066 747 aa24.92■■□□□ 1.58
YIPF3-206ENST00000460903 MTUS2Q5JR59 1369 aa24.89■■□□□ 1.57
YIPF3-206ENST00000460903 EHBP1L1Q8N3D4 1523 aa24.88■■□□□ 1.57
YIPF3-206ENST00000460903 SETD1AO15047 1707 aaKnown RBP24.88■■□□□ 1.57
YIPF3-206ENST00000460903 WASHC2CQ9Y4E1 1318 aa24.87■■□□□ 1.57
YIPF3-206ENST00000460903 CEP152O94986 1710 aa24.86■■□□□ 1.57
YIPF3-206ENST00000460903 CCDC141Q6ZP82 1450 aa24.86■■□□□ 1.57
YIPF3-206ENST00000460903 CAMSAP2Q08AD1 1489 aa24.82■■□□□ 1.56
YIPF3-206ENST00000460903 ABCC3O15438 1527 aa24.81■■□□□ 1.56
YIPF3-206ENST00000460903 MROH1Q8NDA8 1641 aa24.79■■□□□ 1.56
YIPF3-206ENST00000460903 CEP162Q5TB80 1403 aa24.78■■□□□ 1.56
YIPF3-206ENST00000460903 ERVK-7P63135 1459 aa24.78■■□□□ 1.56
YIPF3-206ENST00000460903 ARHGEF5Q12774 1597 aa24.78■■□□□ 1.56
YIPF3-206ENST00000460903 EIF2AK4Q9P2K8 1649 aaKnown RBP24.76■■□□□ 1.55
YIPF3-206ENST00000460903 ROBO1Q9Y6N7 1651 aa24.76■■□□□ 1.55
YIPF3-206ENST00000460903 POTEAQ6S8J7 498 aa24.76■■□□□ 1.55
YIPF3-206ENST00000460903 CHIC1Q5VXU3 224 aa24.75■■□□□ 1.55
YIPF3-206ENST00000460903 SCAF11Q99590 1463 aaKnown RBP24.75■■□□□ 1.55
YIPF3-206ENST00000460903 NCOA2Q15596 1464 aa24.74■■□□□ 1.55
YIPF3-206ENST00000460903 SLIT1O75093 1534 aa24.72■■□□□ 1.55
YIPF3-206ENST00000460903 ARHGAP23Q9P227 1491 aa24.71■■□□□ 1.55
YIPF3-206ENST00000460903 MAST1Q9Y2H9 1570 aa24.7■■□□□ 1.54
YIPF3-206ENST00000460903 FAM135BQ49AJ0 1406 aa24.69■■□□□ 1.54
YIPF3-206ENST00000460903 PIK3C2BO00750 1634 aa24.67■■□□□ 1.54
YIPF3-206ENST00000460903 LTKP29376 864 aa24.66■■□□□ 1.54
YIPF3-206ENST00000460903 RSPH4AQ5TD94 716 aa24.65■■□□□ 1.54
YIPF3-206ENST00000460903 PHLPP1O60346 1717 aa24.64■■□□□ 1.54
YIPF3-206ENST00000460903 MAP3K1Q13233 1512 aa24.64■■□□□ 1.53
YIPF3-206ENST00000460903 KDM5AP29375 1690 aaKnown RBP24.61■■□□□ 1.53
YIPF3-206ENST00000460903 TXNDC2Q86VQ3 553 aa24.6■■□□□ 1.53
YIPF3-206ENST00000460903 TMEM94Q12767 1356 aa24.56■■□□□ 1.52
YIPF3-206ENST00000460903 TSPY4P0CV99 314 aa24.56■■□□□ 1.52
YIPF3-206ENST00000460903 TSPY10P0CW01 314 aa24.56■■□□□ 1.52
YIPF3-206ENST00000460903 PRDM15P57071 1507 aaPredicted RBP24.56■■□□□ 1.52
YIPF3-206ENST00000460903 TET3O43151 1660 aa24.55■■□□□ 1.52
YIPF3-206ENST00000460903 NWD1Q149M9 1564 aa24.54■■□□□ 1.52
YIPF3-206ENST00000460903 LRRC9Q6ZRR7 1453 aa24.53■■□□□ 1.52
YIPF3-206ENST00000460903 ARHGAP31Q2M1Z3 1444 aa24.52■■□□□ 1.52
YIPF3-206ENST00000460903 COL16A1Q07092 1604 aaPredicted RBP24.51■■□□□ 1.51
YIPF3-206ENST00000460903 DUOX2Q9NRD8 1548 aa24.51■■□□□ 1.51
YIPF3-206ENST00000460903 CROCC2H7BZ55 1655 aa24.5■■□□□ 1.51
YIPF3-206ENST00000460903 TMEM2Q9UHN6 1383 aa24.5■■□□□ 1.51
YIPF3-206ENST00000460903 CHD2O14647 1828 aaKnown RBP24.49■■□□□ 1.51
YIPF3-206ENST00000460903 MYO5BQ9ULV0 1848 aa24.49■■□□□ 1.51
YIPF3-206ENST00000460903 RBM33Q96EV2 1170 aaKnown RBP24.49■■□□□ 1.51
YIPF3-206ENST00000460903 EID1Q9Y6B2 187 aa24.49■■□□□ 1.51
YIPF3-206ENST00000460903 EFCAB6Q5THR3 1501 aa24.48■■□□□ 1.51
YIPF3-206ENST00000460903 NKTRP30414 1462 aaKnown RBP24.46■■□□□ 1.51
YIPF3-206ENST00000460903 KCNA6P17658 529 aa24.45■■□□□ 1.5
YIPF3-206ENST00000460903 LRP6O75581 1613 aa24.44■■□□□ 1.5
YIPF3-206ENST00000460903 JCADQ9P266 1359 aa24.42■■□□□ 1.5
YIPF3-206ENST00000460903 PROSER2Q86WR7 435 aaPredicted RBP24.42■■□□□ 1.5
YIPF3-206ENST00000460903 SHPRHQ149N8 1683 aa24.42■■□□□ 1.5
YIPF3-206ENST00000460903 SLC26A8Q96RN1 970 aa24.41■■□□□ 1.5
YIPF3-206ENST00000460903 UPF1Q92900 1129 aaKnown RBP eCLIP24.4■■□□□ 1.5
YIPF3-206ENST00000460903 ADGRB3O60242 1522 aa24.38■■□□□ 1.49
YIPF3-206ENST00000460903 MSH6P52701 1360 aa24.37■■□□□ 1.49
YIPF3-206ENST00000460903 ERBINQ96RT1 1412 aa24.36■■□□□ 1.49
YIPF3-206ENST00000460903 SLAIN2Q9P270 581 aa24.35■■□□□ 1.49
YIPF3-206ENST00000460903 KIF15Q9NS87 1388 aa24.34■■□□□ 1.49
YIPF3-206ENST00000460903 IDI1Q13907 227 aa24.34■■□□□ 1.49
YIPF3-206ENST00000460903 STAG3Q9UJ98 1225 aa24.34■■□□□ 1.49
YIPF3-206ENST00000460903 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.34■■□□□ 1.49
YIPF3-206ENST00000460903 GCC2Q8IWJ2 1684 aa24.34■■□□□ 1.49
YIPF3-206ENST00000460903 LMTK2Q8IWU2 1503 aa24.33■■□□□ 1.49
YIPF3-206ENST00000460903 AHDC1Q5TGY3 1603 aaPredicted RBP24.32■■□□□ 1.48
YIPF3-206ENST00000460903 MYOM3Q5VTT5 1437 aa24.32■■□□□ 1.48
YIPF3-206ENST00000460903 TRIM52Q96A61 297 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms