RNA–Protein interactions for RNA: ENST00000460801.5

PTPRN-210, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 2

Gene PTPRN, Length 2,239 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-210ENST00000460801 CCDC144AA2RUR9 1427 aa19.45■□□□□ 0.7
PTPRN-210ENST00000460801 ZNF326Q5BKZ1 582 aaKnown RBP19.44■□□□□ 0.7
PTPRN-210ENST00000460801 ATP10AO60312 1499 aa19.43■□□□□ 0.7
PTPRN-210ENST00000460801 KDM5CP41229 1560 aa19.43■□□□□ 0.7
PTPRN-210ENST00000460801 USP47Q96K76 1375 aa19.43■□□□□ 0.7
PTPRN-210ENST00000460801 INO80Q9ULG1 1556 aaPredicted RBP19.42■□□□□ 0.7
PTPRN-210ENST00000460801 KIF7Q2M1P5 1343 aa19.42■□□□□ 0.7
PTPRN-210ENST00000460801 DCAF11Q8TEB1 546 aa19.41■□□□□ 0.7
PTPRN-210ENST00000460801 NPM1P06748 294 aaKnown RBP eCLIP19.4■□□□□ 0.7
PTPRN-210ENST00000460801 ADGRL1O94910 1474 aa19.4■□□□□ 0.7
PTPRN-210ENST00000460801 ATP7AQ04656 1500 aa19.4■□□□□ 0.7
PTPRN-210ENST00000460801 SCAPERQ9BY12 1400 aa19.39■□□□□ 0.69
PTPRN-210ENST00000460801 KDM2AQ9Y2K7 1162 aa19.38■□□□□ 0.69
PTPRN-210ENST00000460801 BCORL1Q5H9F3 1711 aa19.37■□□□□ 0.69
PTPRN-210ENST00000460801 DEPDC5O75140 1603 aa19.37■□□□□ 0.69
PTPRN-210ENST00000460801 CARD11Q9BXL7 1154 aa19.35■□□□□ 0.69
PTPRN-210ENST00000460801 ARID4BQ4LE39 1312 aaPredicted RBP19.35■□□□□ 0.69
PTPRN-210ENST00000460801 PRAG1Q86YV5 1406 aa19.34■□□□□ 0.69
PTPRN-210ENST00000460801 A2MP01023 1474 aa19.34■□□□□ 0.69
PTPRN-210ENST00000460801 E9PCH4 1651 aa19.32■□□□□ 0.68
PTPRN-210ENST00000460801 TRPM1Q7Z4N2 1603 aa19.32■□□□□ 0.68
PTPRN-210ENST00000460801 DHX29Q7Z478 1369 aaKnown RBP19.31■□□□□ 0.68
PTPRN-210ENST00000460801 VWDEQ8N2E2 1590 aa19.31■□□□□ 0.68
PTPRN-210ENST00000460801 EIF2AK4Q9P2K8 1649 aaKnown RBP19.31■□□□□ 0.68
PTPRN-210ENST00000460801 RGL3Q3MIN7 710 aa19.31■□□□□ 0.68
PTPRN-210ENST00000460801 PRKRIP1Q9H875 184 aaPredicted RBP19.3■□□□□ 0.68
PTPRN-210ENST00000460801 CD109Q6YHK3 1445 aa19.3■□□□□ 0.68
PTPRN-210ENST00000460801 ROCK2O75116 1388 aaKnown RBP19.29■□□□□ 0.68
PTPRN-210ENST00000460801 TET3O43151 1660 aa19.29■□□□□ 0.68
PTPRN-210ENST00000460801 ZNF518AQ6AHZ1 1483 aa19.29■□□□□ 0.68
PTPRN-210ENST00000460801 CFAP74Q9C0B2 1584 aa19.29■□□□□ 0.68
PTPRN-210ENST00000460801 KIDINS220Q9ULH0 1771 aa19.29■□□□□ 0.68
PTPRN-210ENST00000460801 PTPRTO14522 1441 aa19.28■□□□□ 0.68
PTPRN-210ENST00000460801 GPRASP1Q5JY77 1395 aa19.27■□□□□ 0.68
PTPRN-210ENST00000460801 TRPM2O94759 1503 aa19.27■□□□□ 0.68
PTPRN-210ENST00000460801 KANK1Q14678 1352 aa19.27■□□□□ 0.67
PTPRN-210ENST00000460801 ST20-MTHFSA0A0A6YYL1 179 aa19.26■□□□□ 0.67
PTPRN-210ENST00000460801 PRDM15P57071 1507 aaPredicted RBP19.26■□□□□ 0.67
PTPRN-210ENST00000460801 SPHKAPQ2M3C7 1700 aa19.25■□□□□ 0.67
PTPRN-210ENST00000460801 KIF3BO15066 747 aa19.25■□□□□ 0.67
PTPRN-210ENST00000460801 MYT1LQ9UL68 1186 aa19.25■□□□□ 0.67
PTPRN-210ENST00000460801 LAMC1P11047 1609 aa19.25■□□□□ 0.67
PTPRN-210ENST00000460801 MROH1Q8NDA8 1641 aa19.25■□□□□ 0.67
PTPRN-210ENST00000460801 POGZQ7Z3K3 1410 aa19.23■□□□□ 0.67
PTPRN-210ENST00000460801 NBPF1Q3BBV0 1214 aa19.22■□□□□ 0.67
PTPRN-210ENST00000460801 CEP152O94986 1710 aa19.22■□□□□ 0.67
PTPRN-210ENST00000460801 MLH3Q9UHC1 1453 aa19.21■□□□□ 0.67
PTPRN-210ENST00000460801 CLTCL1P53675 1640 aa19.2■□□□□ 0.66
PTPRN-210ENST00000460801 CCDC184Q52MB2 194 aa19.2■□□□□ 0.66
PTPRN-210ENST00000460801 NEO1Q92859 1461 aa19.18■□□□□ 0.66
PTPRN-210ENST00000460801 POLR3GLQ9BT43 218 aa19.18■□□□□ 0.66
PTPRN-210ENST00000460801 STAC3Q96MF2 364 aa19.17■□□□□ 0.66
PTPRN-210ENST00000460801 RNF17Q9BXT8 1623 aaKnown RBP19.17■□□□□ 0.66
PTPRN-210ENST00000460801 LMTK2Q8IWU2 1503 aa19.16■□□□□ 0.66
PTPRN-210ENST00000460801 HECW2Q9P2P5 1572 aa19.16■□□□□ 0.66
PTPRN-210ENST00000460801 NEURL4Q96JN8 1562 aa19.16■□□□□ 0.66
PTPRN-210ENST00000460801 SUPT16HQ9Y5B9 1047 aaKnown RBP19.16■□□□□ 0.66
PTPRN-210ENST00000460801 EFCAB6Q5THR3 1501 aa19.15■□□□□ 0.66
PTPRN-210ENST00000460801 MADDQ8WXG6 1647 aa19.15■□□□□ 0.66
PTPRN-210ENST00000460801 FRMPD1Q5SYB0 1578 aa19.14■□□□□ 0.66
PTPRN-210ENST00000460801 MRS2Q9HD23 443 aa19.14■□□□□ 0.65
PTPRN-210ENST00000460801 HNRNPUQ00839 825 aaKnown RBP eCLIP19.13■□□□□ 0.65
PTPRN-210ENST00000460801 PPRC1Q5VV67 1664 aaKnown RBP19.12■□□□□ 0.65
PTPRN-210ENST00000460801 TESK2Q96S53 571 aa19.12■□□□□ 0.65
PTPRN-210ENST00000460801 ABCA6Q8N139 1617 aa19.11■□□□□ 0.65
PTPRN-210ENST00000460801 MAP3K4Q9Y6R4 1608 aa19.11■□□□□ 0.65
PTPRN-210ENST00000460801 COL17A1Q9UMD9 1497 aaPredicted RBP19.1■□□□□ 0.65
PTPRN-210ENST00000460801 CYB5RLQ6IPT4 315 aa19.09■□□□□ 0.65
PTPRN-210ENST00000460801 GLI2P10070 1586 aa19.08■□□□□ 0.65
PTPRN-210ENST00000460801 RIMBP3CA6NJZ7 1639 aa19.07■□□□□ 0.64
PTPRN-210ENST00000460801 RIMBP3BA6NNM3 1639 aa19.07■□□□□ 0.64
PTPRN-210ENST00000460801 RIMBP3Q9UFD9 1639 aa19.07■□□□□ 0.64
PTPRN-210ENST00000460801 UGGT1Q9NYU2 1555 aa19.07■□□□□ 0.64
PTPRN-210ENST00000460801 RAPGEF3O95398 923 aa19.06■□□□□ 0.64
PTPRN-210ENST00000460801 FAM9BQ8IZU0 186 aa19.06■□□□□ 0.64
PTPRN-210ENST00000460801 KIF1BO60333 1816 aa19.06■□□□□ 0.64
PTPRN-210ENST00000460801 IQGAP1P46940 1657 aa19.06■□□□□ 0.64
PTPRN-210ENST00000460801 KTN1Q86UP2 1357 aaKnown RBP19.05■□□□□ 0.64
PTPRN-210ENST00000460801 RICTORQ6R327 1708 aa19.05■□□□□ 0.64
PTPRN-210ENST00000460801 DISP3Q9P2K9 1392 aa19.05■□□□□ 0.64
PTPRN-210ENST00000460801 KIAA1210Q9ULL0 1709 aa19.05■□□□□ 0.64
PTPRN-210ENST00000460801 DIP2CQ9Y2E4 1556 aa19.03■□□□□ 0.64
PTPRN-210ENST00000460801 MYOM2P54296 1465 aa19.03■□□□□ 0.64
PTPRN-210ENST00000460801 NPATQ14207 1427 aa19.03■□□□□ 0.64
PTPRN-210ENST00000460801 TMF1P82094 1093 aa19.02■□□□□ 0.64
PTPRN-210ENST00000460801 GGT6Q6P531 493 aa19.02■□□□□ 0.64
PTPRN-210ENST00000460801 SCAF11Q99590 1463 aaKnown RBP19.02■□□□□ 0.63
PTPRN-210ENST00000460801 IFT172Q9UG01 1749 aa19.01■□□□□ 0.63
PTPRN-210ENST00000460801 ABCC3O15438 1527 aa19.01■□□□□ 0.63
PTPRN-210ENST00000460801 RALBP1Q15311 655 aa19.01■□□□□ 0.63
PTPRN-210ENST00000460801 MROH2AA6NES4 1674 aa19■□□□□ 0.63
PTPRN-210ENST00000460801 PER1O15534 1290 aaPredicted RBP19■□□□□ 0.63
PTPRN-210ENST00000460801 CNGB1Q14028 1251 aaPredicted RBP19■□□□□ 0.63
PTPRN-210ENST00000460801 ZBED9Q6R2W3 1325 aa18.99■□□□□ 0.63
PTPRN-210ENST00000460801 ADGRB3O60242 1522 aa18.99■□□□□ 0.63
PTPRN-210ENST00000460801 WASHC2CQ9Y4E1 1318 aa18.98■□□□□ 0.63
PTPRN-210ENST00000460801 FKBP8Q14318 412 aa18.98■□□□□ 0.63
PTPRN-210ENST00000460801 NRXN1Q9ULB1 1477 aa18.97■□□□□ 0.63
PTPRN-210ENST00000460801 MYBBP1AQ9BQG0 1328 aaKnown RBP18.97■□□□□ 0.63
PTPRN-210ENST00000460801 CFAP65Q6ZU64 1925 aaKnown RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms