RNA–Protein interactions for RNA: ENST00000460781.1

CCDC93-204, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 842 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-204ENST00000460781 EMP3P54852 163 aa6.99□□□□□ -1.29
CCDC93-204ENST00000460781 MAP2K5Q13163 448 aa6.99□□□□□ -1.29
CCDC93-204ENST00000460781 MINK1Q8N4C8 1332 aaPredicted RBP6.99□□□□□ -1.29
CCDC93-204ENST00000460781 PTGDRQ13258 359 aa6.98□□□□□ -1.29
CCDC93-204ENST00000460781 C6orf132Q5T0Z8 1188 aa6.98□□□□□ -1.29
CCDC93-204ENST00000460781 TSR1Q2NL82 804 aaKnown RBP6.97□□□□□ -1.29
CCDC93-204ENST00000460781 FAM163AQ96GL9 167 aaPredicted RBP6.97□□□□□ -1.29
CCDC93-204ENST00000460781 ADAM33Q9BZ11 813 aa6.96□□□□□ -1.3
CCDC93-204ENST00000460781 CDHR5Q9HBB8 845 aa6.96□□□□□ -1.3
CCDC93-204ENST00000460781 TTLL12Q14166 644 aaPredicted RBP6.95□□□□□ -1.3
CCDC93-204ENST00000460781 KCNK17Q96T54 332 aa6.95□□□□□ -1.3
CCDC93-204ENST00000460781 VARS2Q5ST30 1063 aaKnown RBP6.94□□□□□ -1.3
CCDC93-204ENST00000460781 CCDC102AQ96A19 550 aa6.94□□□□□ -1.3
CCDC93-204ENST00000460781 BCL2L12Q9HB09 334 aa6.94□□□□□ -1.3
CCDC93-204ENST00000460781 PPP1R3GB7ZBB8 358 aa6.93□□□□□ -1.3
CCDC93-204ENST00000460781 IRF6O14896 467 aa6.93□□□□□ -1.3
CCDC93-204ENST00000460781 OATP04181 439 aa6.93□□□□□ -1.3
CCDC93-204ENST00000460781 SLC4A3P48751 1232 aa6.93□□□□□ -1.3
CCDC93-204ENST00000460781 PACS2Q86VP3 889 aa6.93□□□□□ -1.3
CCDC93-204ENST00000460781 RBM46Q8TBY0 533 aaKnown RBP6.93□□□□□ -1.3
CCDC93-204ENST00000460781 KDM4FA0A1W2PPD8 638 aa6.92□□□□□ -1.3
CCDC93-204ENST00000460781 NBPF26B4DH59 902 aa6.92□□□□□ -1.3
CCDC93-204ENST00000460781 STAC3Q96MF2 364 aa6.92□□□□□ -1.3
CCDC93-204ENST00000460781 RBM27Q9P2N5 1060 aaKnown RBP6.92□□□□□ -1.3
CCDC93-204ENST00000460781 FAM205CA6NFA0 338 aa6.91□□□□□ -1.3
CCDC93-204ENST00000460781 GPR37O15354 613 aa6.91□□□□□ -1.3
CCDC93-204ENST00000460781 ST18O60284 1047 aa6.91□□□□□ -1.3
CCDC93-204ENST00000460781 PBX2P40425 430 aa6.91□□□□□ -1.3
CCDC93-204ENST00000460781 PRIM1P49642 420 aaKnown RBP6.91□□□□□ -1.3
CCDC93-204ENST00000460781 PRSS12P56730 875 aa6.91□□□□□ -1.3
CCDC93-204ENST00000460781 PADI6Q6TGC4 694 aa6.91□□□□□ -1.3
CCDC93-204ENST00000460781 MARVELD3Q96A59 401 aa6.91□□□□□ -1.3
CCDC93-204ENST00000460781 HDGFP51858 240 aaKnown RBP6.9□□□□□ -1.3
CCDC93-204ENST00000460781 PDE4DQ08499 809 aa6.9□□□□□ -1.3
CCDC93-204ENST00000460781 CDCA7LQ96GN5 454 aa6.9□□□□□ -1.3
CCDC93-204ENST00000460781 ARHGAP33O14559 1287 aa6.89□□□□□ -1.31
CCDC93-204ENST00000460781 TRIM66O15016 1216 aa6.89□□□□□ -1.31
CCDC93-204ENST00000460781 CLCN1P35523 988 aa6.89□□□□□ -1.31
CCDC93-204ENST00000460781 ATP1B4Q9UN42 357 aaPredicted RBP6.89□□□□□ -1.31
CCDC93-204ENST00000460781 FECHP22830 423 aa6.87□□□□□ -1.31
CCDC93-204ENST00000460781 BRPF1P55201 1214 aaPredicted RBP6.87□□□□□ -1.31
CCDC93-204ENST00000460781 NPDC1Q9NQX5 325 aaPredicted RBP6.87□□□□□ -1.31
CCDC93-204ENST00000460781 PNMA3Q9UL41 463 aa6.87□□□□□ -1.31
CCDC93-204ENST00000460781 TRIM6-TRIM34B2RNG4 842 aa6.86□□□□□ -1.31
CCDC93-204ENST00000460781 RSPH4AQ5TD94 716 aa6.86□□□□□ -1.31
CCDC93-204ENST00000460781 NBPF3Q9H094 633 aa6.86□□□□□ -1.31
CCDC93-204ENST00000460781 COL9A1P20849 921 aa6.85□□□□□ -1.31
CCDC93-204ENST00000460781 MDM2Q00987 491 aaPredicted RBP6.85□□□□□ -1.31
CCDC93-204ENST00000460781 AMHR2Q16671 573 aa6.85□□□□□ -1.31
CCDC93-204ENST00000460781 TMEM132AQ24JP5 1023 aa6.85□□□□□ -1.31
CCDC93-204ENST00000460781 DDRGK1Q96HY6 314 aa6.85□□□□□ -1.31
CCDC93-204ENST00000460781 KDM4CQ9H3R0 1056 aa6.85□□□□□ -1.31
CCDC93-204ENST00000460781 GPCPD1Q9NPB8 672 aa6.85□□□□□ -1.31
CCDC93-204ENST00000460781 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.84□□□□□ -1.31
CCDC93-204ENST00000460781 GOLGA8CPA6NN73 597 aa6.84□□□□□ -1.31
CCDC93-204ENST00000460781 ZNF687Q8N1G0 1237 aa6.84□□□□□ -1.31
CCDC93-204ENST00000460781 HS3ST6Q96QI5 342 aa6.84□□□□□ -1.31
CCDC93-204ENST00000460781 GPBP1L1Q9HC44 474 aaPredicted RBP6.84□□□□□ -1.31
CCDC93-204ENST00000460781 ADGRG1Q9Y653 693 aa6.84□□□□□ -1.31
CCDC93-204ENST00000460781 ONECUT3O60422 494 aaPredicted RBP6.83□□□□□ -1.32
CCDC93-204ENST00000460781 DNAJB2P25686 324 aa6.83□□□□□ -1.32
CCDC93-204ENST00000460781 PSEN2P49810 448 aa6.83□□□□□ -1.32
CCDC93-204ENST00000460781 FAM161AQ3B820 660 aa6.83□□□□□ -1.32
CCDC93-204ENST00000460781 NUDT18Q6ZVK8 323 aa6.83□□□□□ -1.32
CCDC93-204ENST00000460781 METTL3Q86U44 580 aaKnown RBP6.83□□□□□ -1.32
CCDC93-204ENST00000460781 SULF1Q8IWU6 871 aa6.83□□□□□ -1.32
CCDC93-204ENST00000460781 PROX2Q3B8N5 592 aa6.82□□□□□ -1.32
CCDC93-204ENST00000460781 GIGYF2Q6Y7W6 1299 aaKnown RBP6.82□□□□□ -1.32
CCDC93-204ENST00000460781 TATDN2Q93075 761 aa6.82□□□□□ -1.32
CCDC93-204ENST00000460781 KIAA1468Q9P260 1216 aa6.82□□□□□ -1.32
CCDC93-204ENST00000460781 AXIN2Q9Y2T1 843 aa6.82□□□□□ -1.32
CCDC93-204ENST00000460781 RNF40O75150 1001 aa6.81□□□□□ -1.32
CCDC93-204ENST00000460781 PARP9Q8IXQ6 854 aa6.81□□□□□ -1.32
CCDC93-204ENST00000460781 PXYLP1Q8TE99 480 aa6.81□□□□□ -1.32
CCDC93-204ENST00000460781 RABGEF1Q9UJ41 708 aa6.81□□□□□ -1.32
CCDC93-204ENST00000460781 MRPL50Q8N5N7 158 aaKnown RBP6.8□□□□□ -1.32
CCDC93-204ENST00000460781 RDH13Q8NBN7 331 aa6.8□□□□□ -1.32
CCDC93-204ENST00000460781 IL27Q8NEV9 243 aa6.8□□□□□ -1.32
CCDC93-204ENST00000460781 NECTIN2Q92692 538 aa6.8□□□□□ -1.32
CCDC93-204ENST00000460781 ZBED2Q9BTP6 218 aa6.8□□□□□ -1.32
CCDC93-204ENST00000460781 TSKSQ9UJT2 592 aa6.8□□□□□ -1.32
CCDC93-204ENST00000460781 RCCD1A6NED2 376 aa6.79□□□□□ -1.32
CCDC93-204ENST00000460781 ANKRD13DQ6ZTN6 518 aa6.79□□□□□ -1.32
CCDC93-204ENST00000460781 SLC4A5Q9BY07 1137 aa6.79□□□□□ -1.32
CCDC93-204ENST00000460781 SMAPO00193 183 aa6.78□□□□□ -1.32
CCDC93-204ENST00000460781 DIXDC1Q155Q3 683 aa6.78□□□□□ -1.32
CCDC93-204ENST00000460781 TTC13Q8NBP0 860 aa6.78□□□□□ -1.32
CCDC93-204ENST00000460781 RSPH6AQ9H0K4 717 aa6.78□□□□□ -1.32
CCDC93-204ENST00000460781 DDX11L8A8MPP1 907 aa6.77□□□□□ -1.33
CCDC93-204ENST00000460781 TK2O00142 265 aa6.77□□□□□ -1.33
CCDC93-204ENST00000460781 SSTR3P32745 418 aaPredicted RBP6.77□□□□□ -1.33
CCDC93-204ENST00000460781 LSM11P83369 360 aaKnown RBP eCLIP6.77□□□□□ -1.33
CCDC93-204ENST00000460781 FAM98CQ17RN3 349 aaKnown RBP6.77□□□□□ -1.33
CCDC93-204ENST00000460781 LAPTM4BQ86VI4 370 aa6.77□□□□□ -1.33
CCDC93-204ENST00000460781 NUTM1Q86Y26 1132 aa6.77□□□□□ -1.33
CCDC93-204ENST00000460781 SLF2Q8IX21 1173 aa6.77□□□□□ -1.33
CCDC93-204ENST00000460781 SEPT9Q9UHD8 586 aaPredicted RBP6.77□□□□□ -1.33
CCDC93-204ENST00000460781 DMRTA1Q5VZB9 504 aa6.76□□□□□ -1.33
CCDC93-204ENST00000460781 NLRP7Q8WX94 980 aa6.76□□□□□ -1.33
CCDC93-204ENST00000460781 VPS9D1Q9Y2B5 631 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms