RNA–Protein interactions for RNA: ENST00000460023.5

CCDC78-205, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-205ENST00000460023 DUOX2Q9NRD8 1548 aa33.2■■■□□ 2.91
CCDC78-205ENST00000460023 DAPK1P53355 1430 aa33.19■■■□□ 2.9
CCDC78-205ENST00000460023 EIF2AK4Q9P2K8 1649 aaKnown RBP33.19■■■□□ 2.9
CCDC78-205ENST00000460023 DNMT1P26358 1616 aaKnown RBP33.17■■■□□ 2.9
CCDC78-205ENST00000460023 ILDR1Q86SU0 546 aaPredicted RBP33.16■■■□□ 2.9
CCDC78-205ENST00000460023 KIF15Q9NS87 1388 aa33.15■■■□□ 2.9
CCDC78-205ENST00000460023 CROCC2H7BZ55 1655 aa33.14■■■□□ 2.9
CCDC78-205ENST00000460023 RNF17Q9BXT8 1623 aaKnown RBP33.13■■■□□ 2.89
CCDC78-205ENST00000460023 ANKRD30AQ9BXX3 1397 aa33.13■■■□□ 2.89
CCDC78-205ENST00000460023 RRP7BPQ9NSQ0 103 aa33.13■■■□□ 2.89
CCDC78-205ENST00000460023 PZPP20742 1482 aa33.12■■■□□ 2.89
CCDC78-205ENST00000460023 ERBINQ96RT1 1412 aa33.11■■■□□ 2.89
CCDC78-205ENST00000460023 STRCQ7RTU9 1775 aa33.11■■■□□ 2.89
CCDC78-205ENST00000460023 FAM50AQ14320 339 aaKnown RBP33.09■■■□□ 2.89
CCDC78-205ENST00000460023 PTPRTO14522 1441 aa33.09■■■□□ 2.89
CCDC78-205ENST00000460023 NCOA1Q15788 1441 aa33.07■■■□□ 2.88
CCDC78-205ENST00000460023 ZC3H13Q5T200 1668 aaKnown RBP33.07■■■□□ 2.88
CCDC78-205ENST00000460023 MYO3AQ8NEV4 1616 aa33.06■■■□□ 2.88
CCDC78-205ENST00000460023 ZNF142P52746 1687 aaPredicted RBP33.06■■■□□ 2.88
CCDC78-205ENST00000460023 TNRQ92752 1358 aa33.06■■■□□ 2.88
CCDC78-205ENST00000460023 FBXO31Q5XUX0 539 aaPredicted RBP33.05■■■□□ 2.88
CCDC78-205ENST00000460023 FBXO41Q8TF61 875 aa33.05■■■□□ 2.88
CCDC78-205ENST00000460023 CEP170BQ9Y4F5 1589 aaPredicted RBP33.04■■■□□ 2.88
CCDC78-205ENST00000460023 PKD2Q13563 968 aa33.04■■■□□ 2.88
CCDC78-205ENST00000460023 CHIC2Q9UKJ5 165 aa33.04■■■□□ 2.88
CCDC78-205ENST00000460023 CAMSAP1Q5T5Y3 1602 aa33.03■■■□□ 2.88
CCDC78-205ENST00000460023 A2ML1A8K2U0 1454 aa33.03■■■□□ 2.88
CCDC78-205ENST00000460023 PLA2R1Q13018 1463 aa33.02■■■□□ 2.88
CCDC78-205ENST00000460023 ABCC3O15438 1527 aa33.02■■■□□ 2.88
CCDC78-205ENST00000460023 ADGRL2O95490 1459 aa32.99■■■□□ 2.87
CCDC78-205ENST00000460023 KANK1Q14678 1352 aa32.97■■■□□ 2.87
CCDC78-205ENST00000460023 CERKQ8TCT0 537 aa32.97■■■□□ 2.87
CCDC78-205ENST00000460023 NLRP1Q9C000 1473 aa32.97■■■□□ 2.87
CCDC78-205ENST00000460023 MROH1Q8NDA8 1641 aa32.96■■■□□ 2.87
CCDC78-205ENST00000460023 PRDM15P57071 1507 aaPredicted RBP32.94■■■□□ 2.86
CCDC78-205ENST00000460023 THEMISQ8N1K5 641 aaPredicted RBP32.94■■■□□ 2.86
CCDC78-205ENST00000460023 ARHGAP31Q2M1Z3 1444 aa32.92■■■□□ 2.86
CCDC78-205ENST00000460023 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.91■■■□□ 2.86
CCDC78-205ENST00000460023 NCKAP5LQ9HCH0 1330 aa32.91■■■□□ 2.86
CCDC78-205ENST00000460023 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.91■■■□□ 2.86
CCDC78-205ENST00000460023 DEPDC5O75140 1603 aa32.89■■■□□ 2.86
CCDC78-205ENST00000460023 SPATA31D1Q6ZQQ2 1576 aa32.89■■■□□ 2.86
CCDC78-205ENST00000460023 ERVK-7P63135 1459 aa32.86■■■□□ 2.85
CCDC78-205ENST00000460023 ANKRD50Q9ULJ7 1429 aa32.85■■■□□ 2.85
CCDC78-205ENST00000460023 CEP152O94986 1710 aa32.85■■■□□ 2.85
CCDC78-205ENST00000460023 ANKLE2Q86XL3 938 aa32.84■■■□□ 2.85
CCDC78-205ENST00000460023 ROCK1Q13464 1354 aa32.83■■■□□ 2.85
CCDC78-205ENST00000460023 UGGT1Q9NYU2 1555 aa32.83■■■□□ 2.85
CCDC78-205ENST00000460023 LMTK2Q8IWU2 1503 aa32.81■■■□□ 2.84
CCDC78-205ENST00000460023 PPARGC1BQ86YN6 1023 aaKnown RBP32.8■■■□□ 2.84
CCDC78-205ENST00000460023 VWDEQ8N2E2 1590 aa32.77■■■□□ 2.84
CCDC78-205ENST00000460023 CFAP65Q6ZU64 1925 aaKnown RBP32.75■■■□□ 2.83
CCDC78-205ENST00000460023 LTBP4Q8N2S1 1624 aa32.71■■■□□ 2.83
CCDC78-205ENST00000460023 POLR1AO95602 1720 aaPredicted RBP32.7■■■□□ 2.83
CCDC78-205ENST00000460023 IQSEC2Q5JU85 1478 aa32.69■■■□□ 2.82
CCDC78-205ENST00000460023 ITGAEP38570 1179 aa32.68■■■□□ 2.82
CCDC78-205ENST00000460023 MED14O60244 1454 aa32.67■■■□□ 2.82
CCDC78-205ENST00000460023 RRBP1Q9P2E9 1410 aaKnown RBP32.66■■■□□ 2.82
CCDC78-205ENST00000460023 RPRD2Q5VT52 1461 aaKnown RBP32.66■■■□□ 2.82
CCDC78-205ENST00000460023 ZNF335Q9H4Z2 1342 aaPredicted RBP32.65■■■□□ 2.82
CCDC78-205ENST00000460023 EFCAB6Q5THR3 1501 aa32.64■■■□□ 2.82
CCDC78-205ENST00000460023 SLC52A1Q9NWF4 448 aa32.64■■■□□ 2.82
CCDC78-205ENST00000460023 STAG3Q9UJ98 1225 aa32.63■■■□□ 2.81
CCDC78-205ENST00000460023 NEURL4Q96JN8 1562 aa32.62■■■□□ 2.81
CCDC78-205ENST00000460023 NPHP4O75161 1426 aaPredicted RBP32.61■■■□□ 2.81
CCDC78-205ENST00000460023 UBR1Q8IWV7 1749 aa32.61■■■□□ 2.81
CCDC78-205ENST00000460023 NOS1P29475 1434 aa32.6■■■□□ 2.81
CCDC78-205ENST00000460023 IDI1Q13907 227 aa32.59■■■□□ 2.81
CCDC78-205ENST00000460023 EID1Q9Y6B2 187 aa32.59■■■□□ 2.81
CCDC78-205ENST00000460023 UNC13BO14795 1591 aa32.58■■■□□ 2.81
CCDC78-205ENST00000460023 SLIT1O75093 1534 aa32.56■■■□□ 2.8
CCDC78-205ENST00000460023 TET3O43151 1660 aa32.56■■■□□ 2.8
CCDC78-205ENST00000460023 KDM5AP29375 1690 aaKnown RBP32.56■■■□□ 2.8
CCDC78-205ENST00000460023 TXNDC2Q86VQ3 553 aa32.55■■■□□ 2.8
CCDC78-205ENST00000460023 ARHGAP23Q9P227 1491 aa32.54■■■□□ 2.8
CCDC78-205ENST00000460023 SCAF11Q99590 1463 aaKnown RBP32.52■■■□□ 2.8
CCDC78-205ENST00000460023 PIK3C2BO00750 1634 aa32.51■■■□□ 2.8
CCDC78-205ENST00000460023 NUP155O75694 1391 aa32.51■■■□□ 2.79
CCDC78-205ENST00000460023 TMEM2Q9UHN6 1383 aa32.51■■■□□ 2.79
CCDC78-205ENST00000460023 CPS1P31327 1500 aa32.51■■■□□ 2.79
CCDC78-205ENST00000460023 IQGAP1P46940 1657 aa32.5■■■□□ 2.79
CCDC78-205ENST00000460023 GCC2Q8IWJ2 1684 aa32.5■■■□□ 2.79
CCDC78-205ENST00000460023 SYNMO15061 1565 aa32.49■■■□□ 2.79
CCDC78-205ENST00000460023 LTKP29376 864 aa32.48■■■□□ 2.79
CCDC78-205ENST00000460023 IQGAP3Q86VI3 1631 aa32.47■■■□□ 2.79
CCDC78-205ENST00000460023 HDGFP51858 240 aaKnown RBP32.45■■■□□ 2.79
CCDC78-205ENST00000460023 ADGRB3O60242 1522 aa32.4■■■□□ 2.78
CCDC78-205ENST00000460023 UBAP1LF5GYI3 381 aa32.38■■■□□ 2.77
CCDC78-205ENST00000460023 NAIPQ13075 1403 aa32.37■■■□□ 2.77
CCDC78-205ENST00000460023 E9PCH4 1651 aa32.37■■■□□ 2.77
CCDC78-205ENST00000460023 TOM1O60784 492 aa32.33■■■□□ 2.77
CCDC78-205ENST00000460023 HFM1A2PYH4 1435 aa32.32■■■□□ 2.76
CCDC78-205ENST00000460023 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.31■■■□□ 2.76
CCDC78-205ENST00000460023 CHGAP10645 457 aaKnown RBP32.27■■■□□ 2.76
CCDC78-205ENST00000460023 TMEM131LA2VDJ0 1609 aa32.26■■■□□ 2.76
CCDC78-205ENST00000460023 PPP1R15AO75807 674 aaPredicted RBP32.24■■■□□ 2.75
CCDC78-205ENST00000460023 BCANQ96GW7 911 aa32.24■■■□□ 2.75
CCDC78-205ENST00000460023 ZFYVE9O95405 1425 aa32.23■■■□□ 2.75
CCDC78-205ENST00000460023 RIMS2Q9UQ26 1411 aa32.23■■■□□ 2.75
CCDC78-205ENST00000460023 TRIM52Q96A61 297 aa32.22■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms