RNA–Protein interactions for RNA: ENST00000459963.5

NCSTN-209, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 1,246 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-209ENST00000459963 CLTCQ00610 1675 aaKnown RBP14.08□□□□□ -0.16
NCSTN-209ENST00000459963 MYO5CQ9NQX4 1742 aa14.08□□□□□ -0.16
NCSTN-209ENST00000459963 DSG3P32926 999 aa14.08□□□□□ -0.16
NCSTN-209ENST00000459963 STRCP1A6NGW2 1772 aa14.08□□□□□ -0.16
NCSTN-209ENST00000459963 NPHP4O75161 1426 aaPredicted RBP14.07□□□□□ -0.16
NCSTN-209ENST00000459963 MED14O60244 1454 aa14.06□□□□□ -0.16
NCSTN-209ENST00000459963 ZNF772Q68DY9 489 aaPredicted RBP14.06□□□□□ -0.16
NCSTN-209ENST00000459963 ZRANB1Q9UGI0 708 aa14.05□□□□□ -0.16
NCSTN-209ENST00000459963 ARHGAP5Q13017 1502 aa14.04□□□□□ -0.16
NCSTN-209ENST00000459963 RXRBP28702 533 aa14.03□□□□□ -0.16
NCSTN-209ENST00000459963 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.03□□□□□ -0.16
NCSTN-209ENST00000459963 KIDINS220Q9ULH0 1771 aa14.02□□□□□ -0.16
NCSTN-209ENST00000459963 CDK12Q9NYV4 1490 aaPredicted RBP14.02□□□□□ -0.16
NCSTN-209ENST00000459963 IFFO2Q5TF58 517 aa14.02□□□□□ -0.17
NCSTN-209ENST00000459963 DEPDC5O75140 1603 aa14.01□□□□□ -0.17
NCSTN-209ENST00000459963 SETBP1Q9Y6X0 1596 aa14.01□□□□□ -0.17
NCSTN-209ENST00000459963 PRXQ9BXM0 1461 aa14.01□□□□□ -0.17
NCSTN-209ENST00000459963 IQGAP1P46940 1657 aa14.01□□□□□ -0.17
NCSTN-209ENST00000459963 CDK13Q14004 1512 aaKnown RBP14□□□□□ -0.17
NCSTN-209ENST00000459963 RBM33Q96EV2 1170 aaKnown RBP14□□□□□ -0.17
NCSTN-209ENST00000459963 ABCC1P33527 1531 aa14□□□□□ -0.17
NCSTN-209ENST00000459963 JCADQ9P266 1359 aa13.99□□□□□ -0.17
NCSTN-209ENST00000459963 ABCB7O75027 752 aa13.99□□□□□ -0.17
NCSTN-209ENST00000459963 THEMISQ8N1K5 641 aaPredicted RBP13.98□□□□□ -0.17
NCSTN-209ENST00000459963 ROBO1Q9Y6N7 1651 aa13.98□□□□□ -0.17
NCSTN-209ENST00000459963 TNRQ92752 1358 aa13.96□□□□□ -0.17
NCSTN-209ENST00000459963 ITSN2Q9NZM3 1697 aa13.96□□□□□ -0.17
NCSTN-209ENST00000459963 MEX3CQ5U5Q3 659 aaKnown RBP13.96□□□□□ -0.17
NCSTN-209ENST00000459963 LRP6O75581 1613 aa13.95□□□□□ -0.18
NCSTN-209ENST00000459963 GGT6Q6P531 493 aa13.95□□□□□ -0.18
NCSTN-209ENST00000459963 XIRP1Q702N8 1843 aaKnown RBP13.94□□□□□ -0.18
NCSTN-209ENST00000459963 KIF14Q15058 1648 aa13.93□□□□□ -0.18
NCSTN-209ENST00000459963 FAM135AQ9P2D6 1515 aa13.92□□□□□ -0.18
NCSTN-209ENST00000459963 ZBTB22O15209 634 aa13.92□□□□□ -0.18
NCSTN-209ENST00000459963 UGGT1Q9NYU2 1555 aa13.92□□□□□ -0.18
NCSTN-209ENST00000459963 SPATA31A6Q5VVP1 1343 aa13.91□□□□□ -0.18
NCSTN-209ENST00000459963 FBXO31Q5XUX0 539 aaPredicted RBP13.91□□□□□ -0.18
NCSTN-209ENST00000459963 PLXNC1O60486 1568 aa13.91□□□□□ -0.18
NCSTN-209ENST00000459963 KDM5DQ9BY66 1539 aa13.9□□□□□ -0.18
NCSTN-209ENST00000459963 PHLPP1O60346 1717 aa13.9□□□□□ -0.18
NCSTN-209ENST00000459963 CDC42BPBQ9Y5S2 1711 aa13.89□□□□□ -0.19
NCSTN-209ENST00000459963 RGS12O14924 1447 aa13.89□□□□□ -0.19
NCSTN-209ENST00000459963 NUTM2BA6NNL0 878 aaPredicted RBP13.88□□□□□ -0.19
NCSTN-209ENST00000459963 NUTM2EB1AL46 878 aaPredicted RBP13.88□□□□□ -0.19
NCSTN-209ENST00000459963 NUTM2DQ5VT03 806 aaPredicted RBP13.88□□□□□ -0.19
NCSTN-209ENST00000459963 NUTM2AQ8IVF1 878 aaPredicted RBP13.88□□□□□ -0.19
NCSTN-209ENST00000459963 SAMD9LQ8IVG5 1584 aa13.88□□□□□ -0.19
NCSTN-209ENST00000459963 LRRC9Q6ZRR7 1453 aa13.87□□□□□ -0.19
NCSTN-209ENST00000459963 NLRP1Q9C000 1473 aa13.87□□□□□ -0.19
NCSTN-209ENST00000459963 RANGAP1P46060 587 aaPredicted RBP13.87□□□□□ -0.19
NCSTN-209ENST00000459963 CDK11AQ9UQ88 783 aaPredicted RBP13.87□□□□□ -0.19
NCSTN-209ENST00000459963 ZC3H13Q5T200 1668 aaKnown RBP13.87□□□□□ -0.19
NCSTN-209ENST00000459963 A2MP01023 1474 aa13.87□□□□□ -0.19
NCSTN-209ENST00000459963 PZPP20742 1482 aa13.85□□□□□ -0.19
NCSTN-209ENST00000459963 SPAG9O60271 1321 aaKnown RBP13.85□□□□□ -0.19
NCSTN-209ENST00000459963 ATP7AQ04656 1500 aa13.85□□□□□ -0.19
NCSTN-209ENST00000459963 ATAD2Q6PL18 1390 aa13.84□□□□□ -0.19
NCSTN-209ENST00000459963 FGD6Q6ZV73 1430 aa13.84□□□□□ -0.19
NCSTN-209ENST00000459963 MIA2Q96PC5 1412 aa13.84□□□□□ -0.19
NCSTN-209ENST00000459963 TMEM94Q12767 1356 aa13.83□□□□□ -0.19
NCSTN-209ENST00000459963 COL16A1Q07092 1604 aaPredicted RBP13.83□□□□□ -0.2
NCSTN-209ENST00000459963 TROQ12816 1431 aaPredicted RBP13.83□□□□□ -0.2
NCSTN-209ENST00000459963 LRP5O75197 1615 aa13.82□□□□□ -0.2
NCSTN-209ENST00000459963 PREX2Q70Z35 1606 aa13.82□□□□□ -0.2
NCSTN-209ENST00000459963 CLIP1P30622 1438 aa13.81□□□□□ -0.2
NCSTN-209ENST00000459963 RBM6P78332 1123 aaKnown RBP13.81□□□□□ -0.2
NCSTN-209ENST00000459963 AFF2P51816 1311 aa13.81□□□□□ -0.2
NCSTN-209ENST00000459963 MAP3K1Q13233 1512 aa13.8□□□□□ -0.2
NCSTN-209ENST00000459963 SLAIN2Q9P270 581 aa13.78□□□□□ -0.2
NCSTN-209ENST00000459963 ATP1B4Q9UN42 357 aaPredicted RBP13.78□□□□□ -0.2
NCSTN-209ENST00000459963 SCAF11Q99590 1463 aaKnown RBP13.77□□□□□ -0.21
NCSTN-209ENST00000459963 SHPRHQ149N8 1683 aa13.76□□□□□ -0.21
NCSTN-209ENST00000459963 INO80Q9ULG1 1556 aaPredicted RBP13.76□□□□□ -0.21
NCSTN-209ENST00000459963 YY1P25490 414 aa13.76□□□□□ -0.21
NCSTN-209ENST00000459963 QTRT2Q9H974 415 aaKnown RBP13.76□□□□□ -0.21
NCSTN-209ENST00000459963 POLA2Q14181 598 aa13.75□□□□□ -0.21
NCSTN-209ENST00000459963 CCDC125Q86Z20 511 aa13.75□□□□□ -0.21
NCSTN-209ENST00000459963 SYCP2Q9BX26 1530 aa13.74□□□□□ -0.21
NCSTN-209ENST00000459963 ATF5Q9Y2D1 282 aaPredicted RBP13.74□□□□□ -0.21
NCSTN-209ENST00000459963 HNRNPMP52272 730 aaKnown RBP eCLIP13.73□□□□□ -0.21
NCSTN-209ENST00000459963 PROSER2Q86WR7 435 aaPredicted RBP13.73□□□□□ -0.21
NCSTN-209ENST00000459963 MSH6P52701 1360 aa13.72□□□□□ -0.21
NCSTN-209ENST00000459963 LTKP29376 864 aa13.72□□□□□ -0.21
NCSTN-209ENST00000459963 NGLY1Q96IV0 654 aa13.72□□□□□ -0.21
NCSTN-209ENST00000459963 ZNF777Q9ULD5 760 aaPredicted RBP13.72□□□□□ -0.21
NCSTN-209ENST00000459963 ADGBQ8N7X0 1667 aa13.72□□□□□ -0.21
NCSTN-209ENST00000459963 WASHC2CQ9Y4E1 1318 aa13.71□□□□□ -0.21
NCSTN-209ENST00000459963 ATXN8OSP0DMR3 200 aa13.71□□□□□ -0.21
NCSTN-209ENST00000459963 KCNA6P17658 529 aa13.71□□□□□ -0.21
NCSTN-209ENST00000459963 TXNDC2Q86VQ3 553 aa13.71□□□□□ -0.21
NCSTN-209ENST00000459963 PRDM15P57071 1507 aaPredicted RBP13.7□□□□□ -0.22
NCSTN-209ENST00000459963 TIAM1Q13009 1591 aa13.7□□□□□ -0.22
NCSTN-209ENST00000459963 EP400Q96L91 3159 aa13.69□□□□□ -0.22
NCSTN-209ENST00000459963 NWD1Q149M9 1564 aa13.68□□□□□ -0.22
NCSTN-209ENST00000459963 ABCC3O15438 1527 aa13.68□□□□□ -0.22
NCSTN-209ENST00000459963 AHDC1Q5TGY3 1603 aaPredicted RBP13.68□□□□□ -0.22
NCSTN-209ENST00000459963 ARHGAP23Q9P227 1491 aa13.67□□□□□ -0.22
NCSTN-209ENST00000459963 CDC42BPAQ5VT25 1732 aa13.67□□□□□ -0.22
NCSTN-209ENST00000459963 C8orf37Q96NL8 207 aa13.67□□□□□ -0.22
NCSTN-209ENST00000459963 KIAA1107Q9UPP5 1409 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms