RNA–Protein interactions for RNA: ENST00000459904.1

LMNA-209, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-209ENST00000459904 A2ML1A8K2U0 1454 aa24.16■■□□□ 1.46
LMNA-209ENST00000459904 IQSEC2Q5JU85 1478 aa24.16■■□□□ 1.46
LMNA-209ENST00000459904 LOC105371045A0A1W2PR82 267 aa24.16■■□□□ 1.46
LMNA-209ENST00000459904 UBAP1LF5GYI3 381 aa24.16■■□□□ 1.46
LMNA-209ENST00000459904 PKD2Q13563 968 aa24.15■■□□□ 1.46
LMNA-209ENST00000459904 NEURL4Q96JN8 1562 aa24.13■■□□□ 1.45
LMNA-209ENST00000459904 PPP6R1Q9UPN7 881 aa24.13■■□□□ 1.45
LMNA-209ENST00000459904 KDM5DQ9BY66 1539 aa24.12■■□□□ 1.45
LMNA-209ENST00000459904 TNRQ92752 1358 aa24.12■■□□□ 1.45
LMNA-209ENST00000459904 WASHC2CQ9Y4E1 1318 aa24.1■■□□□ 1.45
LMNA-209ENST00000459904 ARHGEF5Q12774 1597 aa24.08■■□□□ 1.45
LMNA-209ENST00000459904 PZPP20742 1482 aa24.08■■□□□ 1.45
LMNA-209ENST00000459904 CEP152O94986 1710 aa24.07■■□□□ 1.44
LMNA-209ENST00000459904 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.06■■□□□ 1.44
LMNA-209ENST00000459904 KANK4Q5T7N3 995 aaPredicted RBP24.06■■□□□ 1.44
LMNA-209ENST00000459904 SCAF1Q9H7N4 1312 aaKnown RBP24.05■■□□□ 1.44
LMNA-209ENST00000459904 SOCS7O14512 581 aa24.04■■□□□ 1.44
LMNA-209ENST00000459904 LRRC9Q6ZRR7 1453 aa24.04■■□□□ 1.44
LMNA-209ENST00000459904 PIP4K2BP78356 416 aa24.02■■□□□ 1.44
LMNA-209ENST00000459904 STRCP1A6NGW2 1772 aa24.01■■□□□ 1.43
LMNA-209ENST00000459904 TSPY4P0CV99 314 aa24.01■■□□□ 1.43
LMNA-209ENST00000459904 TSPY10P0CW01 314 aa24.01■■□□□ 1.43
LMNA-209ENST00000459904 RNF17Q9BXT8 1623 aaKnown RBP24.01■■□□□ 1.43
LMNA-209ENST00000459904 VPS8Q8N3P4 1428 aa24.01■■□□□ 1.43
LMNA-209ENST00000459904 MIA2Q96PC5 1412 aa24.01■■□□□ 1.43
LMNA-209ENST00000459904 UGGT1Q9NYU2 1555 aa24■■□□□ 1.43
LMNA-209ENST00000459904 VWDEQ8N2E2 1590 aa23.99■■□□□ 1.43
LMNA-209ENST00000459904 MROH1Q8NDA8 1641 aa23.99■■□□□ 1.43
LMNA-209ENST00000459904 RSPH4AQ5TD94 716 aa23.98■■□□□ 1.43
LMNA-209ENST00000459904 SHANK2Q9UPX8 1470 aa23.98■■□□□ 1.43
LMNA-209ENST00000459904 ABCC3O15438 1527 aa23.98■■□□□ 1.43
LMNA-209ENST00000459904 MAST1Q9Y2H9 1570 aa23.97■■□□□ 1.43
LMNA-209ENST00000459904 ANKLE2Q86XL3 938 aa23.96■■□□□ 1.43
LMNA-209ENST00000459904 SENP3Q9H4L4 574 aaPredicted RBP23.96■■□□□ 1.43
LMNA-209ENST00000459904 IQGAP1P46940 1657 aa23.95■■□□□ 1.43
LMNA-209ENST00000459904 FAM135AQ9P2D6 1515 aa23.95■■□□□ 1.43
LMNA-209ENST00000459904 HSPA1LP34931 641 aa23.95■■□□□ 1.42
LMNA-209ENST00000459904 NPHP4O75161 1426 aaPredicted RBP23.93■■□□□ 1.42
LMNA-209ENST00000459904 ZC3H13Q5T200 1668 aaKnown RBP23.93■■□□□ 1.42
LMNA-209ENST00000459904 NLRP1Q9C000 1473 aa23.93■■□□□ 1.42
LMNA-209ENST00000459904 ALKQ9UM73 1620 aa23.92■■□□□ 1.42
LMNA-209ENST00000459904 THEMISQ8N1K5 641 aaPredicted RBP23.92■■□□□ 1.42
LMNA-209ENST00000459904 DEPDC5O75140 1603 aa23.92■■□□□ 1.42
LMNA-209ENST00000459904 EIF2AK4Q9P2K8 1649 aaKnown RBP23.92■■□□□ 1.42
LMNA-209ENST00000459904 CPS1P31327 1500 aa23.91■■□□□ 1.42
LMNA-209ENST00000459904 UBR1Q8IWV7 1749 aa23.9■■□□□ 1.42
LMNA-209ENST00000459904 ERVK-7P63135 1459 aa23.9■■□□□ 1.42
LMNA-209ENST00000459904 CROCC2H7BZ55 1655 aa23.89■■□□□ 1.42
LMNA-209ENST00000459904 MYOM3Q5VTT5 1437 aa23.89■■□□□ 1.41
LMNA-209ENST00000459904 MED14O60244 1454 aa23.87■■□□□ 1.41
LMNA-209ENST00000459904 MED1Q15648 1581 aaPredicted RBP23.86■■□□□ 1.41
LMNA-209ENST00000459904 TOM1O60784 492 aa23.85■■□□□ 1.41
LMNA-209ENST00000459904 RRP7BPQ9NSQ0 103 aa23.84■■□□□ 1.41
LMNA-209ENST00000459904 PTPN23Q9H3S7 1636 aa23.84■■□□□ 1.41
LMNA-209ENST00000459904 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.83■■□□□ 1.41
LMNA-209ENST00000459904 DUOX2Q9NRD8 1548 aa23.83■■□□□ 1.41
LMNA-209ENST00000459904 XIRP1Q702N8 1843 aaKnown RBP23.82■■□□□ 1.4
LMNA-209ENST00000459904 MAP3K1Q13233 1512 aa23.81■■□□□ 1.4
LMNA-209ENST00000459904 ABCC5O15440 1437 aa23.8■■□□□ 1.4
LMNA-209ENST00000459904 LRRC7Q96NW7 1537 aa23.79■■□□□ 1.4
LMNA-209ENST00000459904 KIF15Q9NS87 1388 aa23.79■■□□□ 1.4
LMNA-209ENST00000459904 LTKP29376 864 aa23.79■■□□□ 1.4
LMNA-209ENST00000459904 PIK3C2BO00750 1634 aa23.79■■□□□ 1.4
LMNA-209ENST00000459904 CHIC2Q9UKJ5 165 aa23.77■■□□□ 1.4
LMNA-209ENST00000459904 PRDM15P57071 1507 aaPredicted RBP23.76■■□□□ 1.39
LMNA-209ENST00000459904 SCAF11Q99590 1463 aaKnown RBP23.74■■□□□ 1.39
LMNA-209ENST00000459904 DAPK1P53355 1430 aa23.73■■□□□ 1.39
LMNA-209ENST00000459904 SYNMO15061 1565 aa23.73■■□□□ 1.39
LMNA-209ENST00000459904 TXNDC2Q86VQ3 553 aa23.72■■□□□ 1.39
LMNA-209ENST00000459904 ARHGAP23Q9P227 1491 aa23.69■■□□□ 1.38
LMNA-209ENST00000459904 ERBINQ96RT1 1412 aa23.69■■□□□ 1.38
LMNA-209ENST00000459904 MYO5BQ9ULV0 1848 aa23.69■■□□□ 1.38
LMNA-209ENST00000459904 SLIT1O75093 1534 aa23.69■■□□□ 1.38
LMNA-209ENST00000459904 FGD6Q6ZV73 1430 aa23.67■■□□□ 1.38
LMNA-209ENST00000459904 APLP2Q06481 763 aa23.66■■□□□ 1.38
LMNA-209ENST00000459904 ARHGAP31Q2M1Z3 1444 aa23.66■■□□□ 1.38
LMNA-209ENST00000459904 RBM33Q96EV2 1170 aaKnown RBP23.65■■□□□ 1.38
LMNA-209ENST00000459904 PHF23Q9BUL5 403 aaPredicted RBP23.63■■□□□ 1.37
LMNA-209ENST00000459904 STAG3Q9UJ98 1225 aa23.63■■□□□ 1.37
LMNA-209ENST00000459904 IDI1Q13907 227 aa23.62■■□□□ 1.37
LMNA-209ENST00000459904 EID1Q9Y6B2 187 aa23.6■■□□□ 1.37
LMNA-209ENST00000459904 KANK1Q14678 1352 aa23.6■■□□□ 1.37
LMNA-209ENST00000459904 TMEM2Q9UHN6 1383 aa23.6■■□□□ 1.37
LMNA-209ENST00000459904 EFCAB6Q5THR3 1501 aa23.59■■□□□ 1.37
LMNA-209ENST00000459904 SLC26A8Q96RN1 970 aa23.59■■□□□ 1.37
LMNA-209ENST00000459904 ANKRD30AQ9BXX3 1397 aa23.58■■□□□ 1.37
LMNA-209ENST00000459904 LMTK2Q8IWU2 1503 aa23.56■■□□□ 1.36
LMNA-209ENST00000459904 FAM50AQ14320 339 aaKnown RBP23.56■■□□□ 1.36
LMNA-209ENST00000459904 KDM5AP29375 1690 aaKnown RBP23.54■■□□□ 1.36
LMNA-209ENST00000459904 GCC2Q8IWJ2 1684 aa23.54■■□□□ 1.36
LMNA-209ENST00000459904 TET3O43151 1660 aa23.54■■□□□ 1.36
LMNA-209ENST00000459904 ADGRB3O60242 1522 aa23.53■■□□□ 1.36
LMNA-209ENST00000459904 TMEM94Q12767 1356 aa23.52■■□□□ 1.36
LMNA-209ENST00000459904 NOS1P29475 1434 aa23.51■■□□□ 1.35
LMNA-209ENST00000459904 ROBO1Q9Y6N7 1651 aa23.51■■□□□ 1.35
LMNA-209ENST00000459904 RGS17Q9UGC6 210 aaPredicted RBP23.51■■□□□ 1.35
LMNA-209ENST00000459904 PROSER2Q86WR7 435 aaPredicted RBP23.49■■□□□ 1.35
LMNA-209ENST00000459904 BCANQ96GW7 911 aa23.49■■□□□ 1.35
LMNA-209ENST00000459904 ADGRL2O95490 1459 aa23.49■■□□□ 1.35
LMNA-209ENST00000459904 KCNA6P17658 529 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms