RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 NPATQ14207 1427 aa33.3■■■□□ 2.92
SSNA1-202ENST00000459860 DUOX2Q9NRD8 1548 aa33.3■■■□□ 2.92
SSNA1-202ENST00000459860 EIF2AK4Q9P2K8 1649 aaKnown RBP33.3■■■□□ 2.92
SSNA1-202ENST00000459860 ANKRD30AQ9BXX3 1397 aa33.28■■■□□ 2.92
SSNA1-202ENST00000459860 KIF15Q9NS87 1388 aa33.27■■■□□ 2.92
SSNA1-202ENST00000459860 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.26■■■□□ 2.92
SSNA1-202ENST00000459860 GGT6Q6P531 493 aa33.26■■■□□ 2.91
SSNA1-202ENST00000459860 NCOA1Q15788 1441 aa33.26■■■□□ 2.91
SSNA1-202ENST00000459860 KIF3BO15066 747 aa33.25■■■□□ 2.91
SSNA1-202ENST00000459860 CHIC2Q9UKJ5 165 aa33.25■■■□□ 2.91
SSNA1-202ENST00000459860 MROH2AA6NES4 1674 aa33.24■■■□□ 2.91
SSNA1-202ENST00000459860 CLTCQ00610 1675 aaKnown RBP33.23■■■□□ 2.91
SSNA1-202ENST00000459860 ADGRL2O95490 1459 aa33.23■■■□□ 2.91
SSNA1-202ENST00000459860 RRBP1Q9P2E9 1410 aaKnown RBP33.21■■■□□ 2.91
SSNA1-202ENST00000459860 RRP7BPQ9NSQ0 103 aa33.21■■■□□ 2.91
SSNA1-202ENST00000459860 RNF17Q9BXT8 1623 aaKnown RBP33.2■■■□□ 2.9
SSNA1-202ENST00000459860 ERBINQ96RT1 1412 aa33.19■■■□□ 2.9
SSNA1-202ENST00000459860 PPP6R1Q9UPN7 881 aa33.19■■■□□ 2.9
SSNA1-202ENST00000459860 FAM135AQ9P2D6 1515 aa33.18■■■□□ 2.9
SSNA1-202ENST00000459860 PTPRKQ15262 1439 aa33.17■■■□□ 2.9
SSNA1-202ENST00000459860 LTBP4Q8N2S1 1624 aa33.14■■■□□ 2.9
SSNA1-202ENST00000459860 KDM5DQ9BY66 1539 aa33.14■■■□□ 2.9
SSNA1-202ENST00000459860 CAMSAP1Q5T5Y3 1602 aa33.13■■■□□ 2.89
SSNA1-202ENST00000459860 ITGAEP38570 1179 aa33.12■■■□□ 2.89
SSNA1-202ENST00000459860 ZC3H13Q5T200 1668 aaKnown RBP33.1■■■□□ 2.89
SSNA1-202ENST00000459860 NCKAP5LQ9HCH0 1330 aa33.08■■■□□ 2.89
SSNA1-202ENST00000459860 ROCK1Q13464 1354 aa33.08■■■□□ 2.89
SSNA1-202ENST00000459860 WASHC2CQ9Y4E1 1318 aa33.06■■■□□ 2.88
SSNA1-202ENST00000459860 MROH1Q8NDA8 1641 aa33.06■■■□□ 2.88
SSNA1-202ENST00000459860 DEPDC5O75140 1603 aa33.05■■■□□ 2.88
SSNA1-202ENST00000459860 PRDM15P57071 1507 aaPredicted RBP33.04■■■□□ 2.88
SSNA1-202ENST00000459860 PLA2R1Q13018 1463 aa33.03■■■□□ 2.88
SSNA1-202ENST00000459860 MYO3AQ8NEV4 1616 aa33.02■■■□□ 2.88
SSNA1-202ENST00000459860 ANKRD50Q9ULJ7 1429 aa33.02■■■□□ 2.88
SSNA1-202ENST00000459860 CEP152O94986 1710 aa33.01■■■□□ 2.87
SSNA1-202ENST00000459860 CEP170BQ9Y4F5 1589 aaPredicted RBP33■■■□□ 2.87
SSNA1-202ENST00000459860 PKD2Q13563 968 aa33■■■□□ 2.87
SSNA1-202ENST00000459860 ABCC3O15438 1527 aa32.99■■■□□ 2.87
SSNA1-202ENST00000459860 IQSEC2Q5JU85 1478 aa32.99■■■□□ 2.87
SSNA1-202ENST00000459860 ZNF142P52746 1687 aaPredicted RBP32.98■■■□□ 2.87
SSNA1-202ENST00000459860 KANK1Q14678 1352 aa32.97■■■□□ 2.87
SSNA1-202ENST00000459860 ZNF335Q9H4Z2 1342 aaPredicted RBP32.96■■■□□ 2.87
SSNA1-202ENST00000459860 PZPP20742 1482 aa32.93■■■□□ 2.86
SSNA1-202ENST00000459860 FBXO31Q5XUX0 539 aaPredicted RBP32.93■■■□□ 2.86
SSNA1-202ENST00000459860 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.93■■■□□ 2.86
SSNA1-202ENST00000459860 A2ML1A8K2U0 1454 aa32.93■■■□□ 2.86
SSNA1-202ENST00000459860 GCC2Q8IWJ2 1684 aa32.89■■■□□ 2.86
SSNA1-202ENST00000459860 UNC13BO14795 1591 aa32.87■■■□□ 2.85
SSNA1-202ENST00000459860 TNRQ92752 1358 aa32.87■■■□□ 2.85
SSNA1-202ENST00000459860 VWDEQ8N2E2 1590 aa32.86■■■□□ 2.85
SSNA1-202ENST00000459860 LMTK2Q8IWU2 1503 aa32.83■■■□□ 2.85
SSNA1-202ENST00000459860 DISP3Q9P2K9 1392 aa32.81■■■□□ 2.84
SSNA1-202ENST00000459860 ARHGAP31Q2M1Z3 1444 aa32.78■■■□□ 2.84
SSNA1-202ENST00000459860 CFAP65Q6ZU64 1925 aaKnown RBP32.78■■■□□ 2.84
SSNA1-202ENST00000459860 NAIPQ13075 1403 aa32.77■■■□□ 2.84
SSNA1-202ENST00000459860 ILDR2Q71H61 639 aa32.77■■■□□ 2.84
SSNA1-202ENST00000459860 EFCAB6Q5THR3 1501 aa32.77■■■□□ 2.84
SSNA1-202ENST00000459860 HFM1A2PYH4 1435 aa32.77■■■□□ 2.84
SSNA1-202ENST00000459860 SPATA31D1Q6ZQQ2 1576 aa32.76■■■□□ 2.84
SSNA1-202ENST00000459860 TET3O43151 1660 aa32.75■■■□□ 2.83
SSNA1-202ENST00000459860 ERVK-7P63135 1459 aa32.74■■■□□ 2.83
SSNA1-202ENST00000459860 IQGAP3Q86VI3 1631 aa32.74■■■□□ 2.83
SSNA1-202ENST00000459860 UBAP1LF5GYI3 381 aa32.73■■■□□ 2.83
SSNA1-202ENST00000459860 NEURL4Q96JN8 1562 aa32.72■■■□□ 2.83
SSNA1-202ENST00000459860 NLRP1Q9C000 1473 aa32.7■■■□□ 2.83
SSNA1-202ENST00000459860 THEMISQ8N1K5 641 aaPredicted RBP32.68■■■□□ 2.82
SSNA1-202ENST00000459860 NUP155O75694 1391 aa32.68■■■□□ 2.82
SSNA1-202ENST00000459860 ANKLE2Q86XL3 938 aa32.67■■■□□ 2.82
SSNA1-202ENST00000459860 RPRD2Q5VT52 1461 aaKnown RBP32.66■■■□□ 2.82
SSNA1-202ENST00000459860 UGGT1Q9NYU2 1555 aa32.62■■■□□ 2.81
SSNA1-202ENST00000459860 MED14O60244 1454 aa32.61■■■□□ 2.81
SSNA1-202ENST00000459860 E9PCH4 1651 aa32.6■■■□□ 2.81
SSNA1-202ENST00000459860 CPS1P31327 1500 aa32.58■■■□□ 2.81
SSNA1-202ENST00000459860 NPHP4O75161 1426 aaPredicted RBP32.58■■■□□ 2.81
SSNA1-202ENST00000459860 POLR1AO95602 1720 aaPredicted RBP32.57■■■□□ 2.8
SSNA1-202ENST00000459860 SYNMO15061 1565 aa32.54■■■□□ 2.8
SSNA1-202ENST00000459860 SOCS7O14512 581 aa32.54■■■□□ 2.8
SSNA1-202ENST00000459860 NOS1P29475 1434 aa32.53■■■□□ 2.8
SSNA1-202ENST00000459860 TRIM52Q96A61 297 aa32.53■■■□□ 2.8
SSNA1-202ENST00000459860 UBR1Q8IWV7 1749 aa32.51■■■□□ 2.8
SSNA1-202ENST00000459860 PIK3C2BO00750 1634 aa32.5■■■□□ 2.79
SSNA1-202ENST00000459860 SETD5Q9C0A6 1442 aa32.48■■■□□ 2.79
SSNA1-202ENST00000459860 KDM5AP29375 1690 aaKnown RBP32.47■■■□□ 2.79
SSNA1-202ENST00000459860 TOM1O60784 492 aa32.46■■■□□ 2.79
SSNA1-202ENST00000459860 ACIN1Q9UKV3 1341 aaKnown RBP32.46■■■□□ 2.79
SSNA1-202ENST00000459860 SPHKAPQ2M3C7 1700 aa32.46■■■□□ 2.79
SSNA1-202ENST00000459860 HSPA1LP34931 641 aa32.45■■■□□ 2.79
SSNA1-202ENST00000459860 PIP4K2BP78356 416 aa32.44■■■□□ 2.78
SSNA1-202ENST00000459860 SLC52A1Q9NWF4 448 aa32.44■■■□□ 2.78
SSNA1-202ENST00000459860 STAG3Q9UJ98 1225 aa32.43■■■□□ 2.78
SSNA1-202ENST00000459860 ADGRB3O60242 1522 aa32.41■■■□□ 2.78
SSNA1-202ENST00000459860 IDI1Q13907 227 aa32.39■■■□□ 2.78
SSNA1-202ENST00000459860 SCAF1Q9H7N4 1312 aaKnown RBP32.39■■■□□ 2.78
SSNA1-202ENST00000459860 IQGAP1P46940 1657 aa32.39■■■□□ 2.78
SSNA1-202ENST00000459860 ALKQ9UM73 1620 aa32.38■■■□□ 2.77
SSNA1-202ENST00000459860 SLC4A1APQ9BWU0 796 aaKnown RBP32.38■■■□□ 2.77
SSNA1-202ENST00000459860 ARHGAP23Q9P227 1491 aa32.37■■■□□ 2.77
SSNA1-202ENST00000459860 LTKP29376 864 aa32.37■■■□□ 2.77
SSNA1-202ENST00000459860 RAB3GAP2Q9H2M9 1393 aa32.35■■■□□ 2.77
SSNA1-202ENST00000459860 LRRC7Q96NW7 1537 aa32.35■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms