RNA–Protein interactions for RNA: ENST00000459670.2

NEDD9-205, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-205ENST00000459670 SPAG9O60271 1321 aaKnown RBP15.6■□□□□ 0.09
NEDD9-205ENST00000459670 YEATS2Q9ULM3 1422 aa15.59■□□□□ 0.09
NEDD9-205ENST00000459670 FAM135AQ9P2D6 1515 aa15.58■□□□□ 0.09
NEDD9-205ENST00000459670 A2MP01023 1474 aa15.58■□□□□ 0.08
NEDD9-205ENST00000459670 TET3O43151 1660 aa15.57■□□□□ 0.08
NEDD9-205ENST00000459670 ACIN1Q9UKV3 1341 aaKnown RBP15.57■□□□□ 0.08
NEDD9-205ENST00000459670 DHX29Q7Z478 1369 aaKnown RBP15.56■□□□□ 0.08
NEDD9-205ENST00000459670 AGLP35573 1532 aa15.56■□□□□ 0.08
NEDD9-205ENST00000459670 LMTK2Q8IWU2 1503 aa15.56■□□□□ 0.08
NEDD9-205ENST00000459670 E9PCH4 1651 aa15.56■□□□□ 0.08
NEDD9-205ENST00000459670 CEP152O94986 1710 aa15.56■□□□□ 0.08
NEDD9-205ENST00000459670 ZC3H13Q5T200 1668 aaKnown RBP15.54■□□□□ 0.08
NEDD9-205ENST00000459670 RAPGEF3O95398 923 aa15.53■□□□□ 0.08
NEDD9-205ENST00000459670 EFCAB6Q5THR3 1501 aa15.51■□□□□ 0.07
NEDD9-205ENST00000459670 SPHKAPQ2M3C7 1700 aa15.49■□□□□ 0.07
NEDD9-205ENST00000459670 ATP10AO60312 1499 aa15.49■□□□□ 0.07
NEDD9-205ENST00000459670 CCER1Q8TC90 406 aaPredicted RBP15.49■□□□□ 0.07
NEDD9-205ENST00000459670 CAMSAP1Q5T5Y3 1602 aa15.49■□□□□ 0.07
NEDD9-205ENST00000459670 ANKRD30BQ9BXX2 1392 aa15.48■□□□□ 0.07
NEDD9-205ENST00000459670 ABCC3O15438 1527 aa15.48■□□□□ 0.07
NEDD9-205ENST00000459670 PLA2R1Q13018 1463 aa15.46■□□□□ 0.06
NEDD9-205ENST00000459670 MPHOSPH9Q99550 1183 aa15.45■□□□□ 0.06
NEDD9-205ENST00000459670 NUP155O75694 1391 aa15.45■□□□□ 0.06
NEDD9-205ENST00000459670 RPRD2Q5VT52 1461 aaKnown RBP15.44■□□□□ 0.06
NEDD9-205ENST00000459670 TRPM2O94759 1503 aa15.43■□□□□ 0.06
NEDD9-205ENST00000459670 PTPRTO14522 1441 aa15.41■□□□□ 0.06
NEDD9-205ENST00000459670 NEURL4Q96JN8 1562 aa15.41■□□□□ 0.06
NEDD9-205ENST00000459670 PIK3C2BO00750 1634 aa15.4■□□□□ 0.06
NEDD9-205ENST00000459670 ZEB1P37275 1124 aaPredicted RBP15.4■□□□□ 0.06
NEDD9-205ENST00000459670 CLTCL1P53675 1640 aa15.39■□□□□ 0.05
NEDD9-205ENST00000459670 MROH2AA6NES4 1674 aa15.39■□□□□ 0.05
NEDD9-205ENST00000459670 PREX1Q8TCU6 1659 aa15.38■□□□□ 0.05
NEDD9-205ENST00000459670 CLTCQ00610 1675 aaKnown RBP15.38■□□□□ 0.05
NEDD9-205ENST00000459670 ARHGAP31Q2M1Z3 1444 aa15.37■□□□□ 0.05
NEDD9-205ENST00000459670 TRIM52Q96A61 297 aa15.37■□□□□ 0.05
NEDD9-205ENST00000459670 IFT172Q9UG01 1749 aa15.37■□□□□ 0.05
NEDD9-205ENST00000459670 SYNMO15061 1565 aa15.36■□□□□ 0.05
NEDD9-205ENST00000459670 NPATQ14207 1427 aa15.36■□□□□ 0.05
NEDD9-205ENST00000459670 SLC4A1APQ9BWU0 796 aaKnown RBP15.36■□□□□ 0.05
NEDD9-205ENST00000459670 KIF3BO15066 747 aa15.35■□□□□ 0.05
NEDD9-205ENST00000459670 PKD2Q13563 968 aa15.34■□□□□ 0.05
NEDD9-205ENST00000459670 FOXD1Q16676 465 aa15.33■□□□□ 0.04
NEDD9-205ENST00000459670 SIN3AQ96ST3 1273 aa15.33■□□□□ 0.04
NEDD9-205ENST00000459670 NOS1P29475 1434 aa15.33■□□□□ 0.04
NEDD9-205ENST00000459670 FER1L4A9Z1Z3 1794 aa15.32■□□□□ 0.04
NEDD9-205ENST00000459670 TRHP20396 242 aaPredicted RBP15.32■□□□□ 0.04
NEDD9-205ENST00000459670 SPATA31D1Q6ZQQ2 1576 aa15.32■□□□□ 0.04
NEDD9-205ENST00000459670 KANK1Q14678 1352 aa15.31■□□□□ 0.04
NEDD9-205ENST00000459670 KIF1BO60333 1816 aa15.31■□□□□ 0.04
NEDD9-205ENST00000459670 ADGRB3O60242 1522 aa15.3■□□□□ 0.04
NEDD9-205ENST00000459670 CFAP65Q6ZU64 1925 aaKnown RBP15.3■□□□□ 0.04
NEDD9-205ENST00000459670 SPATA31E1Q6ZUB1 1445 aa15.3■□□□□ 0.04
NEDD9-205ENST00000459670 UGGT1Q9NYU2 1555 aa15.3■□□□□ 0.04
NEDD9-205ENST00000459670 ADAMTSL3P82987 1691 aa15.29■□□□□ 0.04
NEDD9-205ENST00000459670 TIMELESSQ9UNS1 1208 aa15.29■□□□□ 0.04
NEDD9-205ENST00000459670 CNTLNQ9NXG0 1405 aa15.28■□□□□ 0.04
NEDD9-205ENST00000459670 MYO5BQ9ULV0 1848 aa15.27■□□□□ 0.04
NEDD9-205ENST00000459670 C3P01024 1663 aa15.27■□□□□ 0.03
NEDD9-205ENST00000459670 ERVK-7P63135 1459 aa15.26■□□□□ 0.03
NEDD9-205ENST00000459670 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.25■□□□□ 0.03
NEDD9-205ENST00000459670 MYT1LQ9UL68 1186 aa15.25■□□□□ 0.03
NEDD9-205ENST00000459670 PPLO60437 1756 aa15.25■□□□□ 0.03
NEDD9-205ENST00000459670 KDM5AP29375 1690 aaKnown RBP15.25■□□□□ 0.03
NEDD9-205ENST00000459670 CCDC144AA2RUR9 1427 aa15.25■□□□□ 0.03
NEDD9-205ENST00000459670 PPP6R1Q9UPN7 881 aa15.24■□□□□ 0.03
NEDD9-205ENST00000459670 UHRF1BP1Q6BDS2 1440 aa15.24■□□□□ 0.03
NEDD9-205ENST00000459670 TMEM131LA2VDJ0 1609 aa15.23■□□□□ 0.03
NEDD9-205ENST00000459670 TRPM1Q7Z4N2 1603 aa15.23■□□□□ 0.03
NEDD9-205ENST00000459670 MADDQ8WXG6 1647 aa15.23■□□□□ 0.03
NEDD9-205ENST00000459670 GGT6Q6P531 493 aa15.2■□□□□ 0.02
NEDD9-205ENST00000459670 TONSLQ96HA7 1378 aa15.2■□□□□ 0.02
NEDD9-205ENST00000459670 LAMC1P11047 1609 aa15.19■□□□□ 0.02
NEDD9-205ENST00000459670 KIAA1210Q9ULL0 1709 aa15.19■□□□□ 0.02
NEDD9-205ENST00000459670 PPP1R15AO75807 674 aaPredicted RBP15.18■□□□□ 0.02
NEDD9-205ENST00000459670 NRXN1Q9ULB1 1477 aa15.18■□□□□ 0.02
NEDD9-205ENST00000459670 RIMS1Q86UR5 1692 aaKnown RBP15.18■□□□□ 0.02
NEDD9-205ENST00000459670 WASHC2CQ9Y4E1 1318 aa15.17■□□□□ 0.02
NEDD9-205ENST00000459670 NEXMIFQ5QGS0 1516 aa15.17■□□□□ 0.02
NEDD9-205ENST00000459670 MYOM2P54296 1465 aa15.17■□□□□ 0.02
NEDD9-205ENST00000459670 RALGAPBQ86X10 1494 aa15.16■□□□□ 0.02
NEDD9-205ENST00000459670 NEUROD1Q13562 356 aa15.16■□□□□ 0.02
NEDD9-205ENST00000459670 L3MBTL2Q969R5 705 aa15.16■□□□□ 0.02
NEDD9-205ENST00000459670 UBR1Q8IWV7 1749 aa15.16■□□□□ 0.02
NEDD9-205ENST00000459670 ZNF142P52746 1687 aaPredicted RBP15.14■□□□□ 0.01
NEDD9-205ENST00000459670 PRAG1Q86YV5 1406 aa15.14■□□□□ 0.01
NEDD9-205ENST00000459670 MYO3AQ8NEV4 1616 aa15.14■□□□□ 0.01
NEDD9-205ENST00000459670 SETD1AO15047 1707 aaKnown RBP15.12■□□□□ 0.01
NEDD9-205ENST00000459670 POLR1AO95602 1720 aaPredicted RBP15.12■□□□□ 0.01
NEDD9-205ENST00000459670 IQGAP1P46940 1657 aa15.12■□□□□ 0.01
NEDD9-205ENST00000459670 ZMYM3Q14202 1370 aa15.11■□□□□ 0.01
NEDD9-205ENST00000459670 NBPF8Q3BBV2 869 aa15.1■□□□□ 0.01
NEDD9-205ENST00000459670 GPRASP1Q5JY77 1395 aa15.09■□□□□ 0.01
NEDD9-205ENST00000459670 A2ML1A8K2U0 1454 aa15.08■□□□□ 0
NEDD9-205ENST00000459670 NRXN3Q9Y4C0 1643 aa15.07■□□□□ 0
NEDD9-205ENST00000459670 ZFYVE9O95405 1425 aa15.06■□□□□ 0
NEDD9-205ENST00000459670 NLRP1Q9C000 1473 aa15.06■□□□□ 0
NEDD9-205ENST00000459670 SETBP1Q9Y6X0 1596 aa15.06■□□□□ 0
NEDD9-205ENST00000459670 MLECQ14165 292 aa15.05■□□□□ -0
NEDD9-205ENST00000459670 FBXO31Q5XUX0 539 aaPredicted RBP15.05■□□□□ -0
NEDD9-205ENST00000459670 PIK3C2GO75747 1445 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms