RNA–Protein interactions for RNA: ENST00000458659.2

TSC22D1-203, Transcript of TSC22 domain family member 1, humanhuman

TSL 1 (best) BASIC

Gene TSC22D1, Length 4,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D1-203ENST00000458659 BCAR3O75815 825 aa16.41■□□□□ 0.22
TSC22D1-203ENST00000458659 CASKIN1Q8WXD9 1431 aa16.41■□□□□ 0.22
TSC22D1-203ENST00000458659 BRD4O60885 1362 aaPredicted RBP16.4■□□□□ 0.22
TSC22D1-203ENST00000458659 SAFB2Q14151 953 aaKnown RBP eCLIP16.4■□□□□ 0.22
TSC22D1-203ENST00000458659 CUX1P39880 1505 aa16.4■□□□□ 0.22
TSC22D1-203ENST00000458659 ANKRD30AQ9BXX3 1397 aa16.4■□□□□ 0.22
TSC22D1-203ENST00000458659 GBP4Q96PP9 640 aa16.4■□□□□ 0.22
TSC22D1-203ENST00000458659 PMFBP1Q8TBY8 1022 aa16.39■□□□□ 0.21
TSC22D1-203ENST00000458659 MAPK8IP3Q9UPT6 1336 aa16.39■□□□□ 0.21
TSC22D1-203ENST00000458659 FOXD4L5Q5VV16 416 aaPredicted RBP16.38■□□□□ 0.21
TSC22D1-203ENST00000458659 FOXD4L4Q8WXT5 416 aaPredicted RBP16.38■□□□□ 0.21
TSC22D1-203ENST00000458659 CADPSQ9ULU8 1353 aa16.38■□□□□ 0.21
TSC22D1-203ENST00000458659 U2AF1L5P0DN76 240 aaPredicted RBP16.38■□□□□ 0.21
TSC22D1-203ENST00000458659 U2AF1Q01081 240 aaKnown RBP eCLIP16.38■□□□□ 0.21
TSC22D1-203ENST00000458659 NBPF1Q3BBV0 1214 aa16.38■□□□□ 0.21
TSC22D1-203ENST00000458659 AQRO60306 1485 aaKnown RBP eCLIP16.37■□□□□ 0.213e-6■■■□□ 15.7
TSC22D1-203ENST00000458659 NCOA1Q15788 1441 aa16.37■□□□□ 0.21
TSC22D1-203ENST00000458659 SMC4Q9NTJ3 1288 aa16.36■□□□□ 0.21
TSC22D1-203ENST00000458659 PTPRKQ15262 1439 aa16.36■□□□□ 0.21
TSC22D1-203ENST00000458659 FAM13BQ9NYF5 915 aa16.34■□□□□ 0.21
TSC22D1-203ENST00000458659 PCF11O94913 1555 aaKnown RBP16.34■□□□□ 0.21
TSC22D1-203ENST00000458659 UBE2Q2Q8WVN8 375 aa16.34■□□□□ 0.21
TSC22D1-203ENST00000458659 FYCO1Q9BQS8 1478 aa16.33■□□□□ 0.21
TSC22D1-203ENST00000458659 TRAK2O60296 914 aa16.32■□□□□ 0.2
TSC22D1-203ENST00000458659 CGNL1Q0VF96 1302 aa16.32■□□□□ 0.2
TSC22D1-203ENST00000458659 E9PSI1 815 aa16.31■□□□□ 0.2
TSC22D1-203ENST00000458659 DDX49Q9Y6V7 483 aaKnown RBP16.31■□□□□ 0.2
TSC22D1-203ENST00000458659 NOL8Q76FK4 1167 aaKnown RBP16.3■□□□□ 0.2
TSC22D1-203ENST00000458659 FOXD4L6Q3SYB3 417 aaPredicted RBP16.3■□□□□ 0.2
TSC22D1-203ENST00000458659 FOXD4L3Q6VB84 417 aaPredicted RBP16.3■□□□□ 0.2
TSC22D1-203ENST00000458659 DDX11L8A8MPP1 907 aa16.3■□□□□ 0.2
TSC22D1-203ENST00000458659 CHMP5Q9NZZ3 219 aa16.3■□□□□ 0.2
TSC22D1-203ENST00000458659 RBM10P98175 930 aaKnown RBP16.29■□□□□ 0.2
TSC22D1-203ENST00000458659 C22orf23Q9BZE7 217 aa16.29■□□□□ 0.2
TSC22D1-203ENST00000458659 CCDC144AA2RUR9 1427 aa16.27■□□□□ 0.2
TSC22D1-203ENST00000458659 CALD1Q05682 793 aaKnown RBP16.26■□□□□ 0.19
TSC22D1-203ENST00000458659 PDZRN3Q9UPQ7 1066 aa16.26■□□□□ 0.19
TSC22D1-203ENST00000458659 ELL2O00472 640 aaPredicted RBP16.25■□□□□ 0.19
TSC22D1-203ENST00000458659 PPP2R1AP30153 589 aa16.25■□□□□ 0.19
TSC22D1-203ENST00000458659 STAG3Q9UJ98 1225 aa16.25■□□□□ 0.19
TSC22D1-203ENST00000458659 CASC1Q6TDU7 716 aa16.24■□□□□ 0.19
TSC22D1-203ENST00000458659 ANKRD30BQ9BXX2 1392 aa16.24■□□□□ 0.19
TSC22D1-203ENST00000458659 LNPKQ9C0E8 428 aa16.24■□□□□ 0.19
TSC22D1-203ENST00000458659 FANCD2Q9BXW9 1451 aa16.24■□□□□ 0.19
TSC22D1-203ENST00000458659 MRE11P49959 708 aa16.24■□□□□ 0.19
TSC22D1-203ENST00000458659 ANKRD45Q5TZF3 282 aa16.23■□□□□ 0.19
TSC22D1-203ENST00000458659 PANK2Q9BZ23 570 aa16.23■□□□□ 0.19
TSC22D1-203ENST00000458659 NUTM2DQ5VT03 806 aaPredicted RBP16.22■□□□□ 0.19
TSC22D1-203ENST00000458659 MAP3K1Q13233 1512 aa16.22■□□□□ 0.19
TSC22D1-203ENST00000458659 PTPN23Q9H3S7 1636 aa16.22■□□□□ 0.19
TSC22D1-203ENST00000458659 R3HCC1Q9Y3T6 440 aaKnown RBP16.22■□□□□ 0.19
TSC22D1-203ENST00000458659 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.21■□□□□ 0.19
TSC22D1-203ENST00000458659 WASHC2CQ9Y4E1 1318 aa16.21■□□□□ 0.18
TSC22D1-203ENST00000458659 MCM4P33991 863 aa16.2■□□□□ 0.18
TSC22D1-203ENST00000458659 ZKSCAN2Q63HK3 967 aa16.2■□□□□ 0.18
TSC22D1-203ENST00000458659 STK26Q9P289 416 aa16.2■□□□□ 0.18
TSC22D1-203ENST00000458659 A0A0U1RQG5 324 aaPredicted RBP16.19■□□□□ 0.18
TSC22D1-203ENST00000458659 TRAK1Q9UPV9 953 aa16.19■□□□□ 0.18
TSC22D1-203ENST00000458659 ANKRD50Q9ULJ7 1429 aa16.19■□□□□ 0.18
TSC22D1-203ENST00000458659 SRPK2P78362 688 aaKnown RBP16.19■□□□□ 0.18
TSC22D1-203ENST00000458659 C8orf34Q49A92 452 aa16.19■□□□□ 0.18
TSC22D1-203ENST00000458659 GRPEL1Q9HAV7 217 aa16.19■□□□□ 0.18
TSC22D1-203ENST00000458659 IGHDP01880 384 aa16.18■□□□□ 0.18
TSC22D1-203ENST00000458659 MPNDQ8N594 471 aa16.18■□□□□ 0.18
TSC22D1-203ENST00000458659 ESPNB1AK53 854 aa16.17■□□□□ 0.18
TSC22D1-203ENST00000458659 ZMYND15Q9H091 742 aa16.17■□□□□ 0.18
TSC22D1-203ENST00000458659 IPO8O15397 1037 aaKnown RBP16.17■□□□□ 0.18
TSC22D1-203ENST00000458659 DZIP1LQ8IYY4 767 aaKnown RBP16.17■□□□□ 0.18
TSC22D1-203ENST00000458659 PLEKHG5O94827 1062 aa16.17■□□□□ 0.18
TSC22D1-203ENST00000458659 NASPP49321 788 aaPredicted RBP16.17■□□□□ 0.18
TSC22D1-203ENST00000458659 MCTP1Q6DN14 999 aa16.16■□□□□ 0.18
TSC22D1-203ENST00000458659 TBC1D2Q9BYX2 928 aa16.16■□□□□ 0.18
TSC22D1-203ENST00000458659 RRAGDQ9NQL2 400 aaPredicted RBP16.16■□□□□ 0.18
TSC22D1-203ENST00000458659 RNF214Q8ND24 703 aa16.15■□□□□ 0.18
TSC22D1-203ENST00000458659 PDS5BQ9NTI5 1447 aa16.15■□□□□ 0.18
TSC22D1-203ENST00000458659 SEC24BO95487 1268 aa16.15■□□□□ 0.18
TSC22D1-203ENST00000458659 KIAA1107Q9UPP5 1409 aa16.15■□□□□ 0.18
TSC22D1-203ENST00000458659 SOX12O15370 315 aa16.15■□□□□ 0.18
TSC22D1-203ENST00000458659 MIA2Q96PC5 1412 aa16.14■□□□□ 0.17
TSC22D1-203ENST00000458659 DUSP27Q5VZP5 1158 aa16.14■□□□□ 0.17
TSC22D1-203ENST00000458659 KIAA1211Q6ZU35 1233 aa16.14■□□□□ 0.17
TSC22D1-203ENST00000458659 KIAA2012Q0VF49 1180 aa16.13■□□□□ 0.17
TSC22D1-203ENST00000458659 CDK13Q14004 1512 aaKnown RBP16.13■□□□□ 0.17
TSC22D1-203ENST00000458659 TAOK2Q9UL54 1235 aa16.13■□□□□ 0.17
TSC22D1-203ENST00000458659 XRCC6P12956 609 aaKnown RBP eCLIP16.13■□□□□ 0.17
TSC22D1-203ENST00000458659 SLFN5Q08AF3 891 aa16.12■□□□□ 0.17
TSC22D1-203ENST00000458659 TCP11L2Q8N4U5 519 aa16.12■□□□□ 0.17
TSC22D1-203ENST00000458659 TSR2Q969E8 191 aaKnown RBP16.12■□□□□ 0.17
TSC22D1-203ENST00000458659 BCL11BQ9C0K0 894 aaPredicted RBP16.12■□□□□ 0.17
TSC22D1-203ENST00000458659 DAPK1P53355 1430 aa16.12■□□□□ 0.17
TSC22D1-203ENST00000458659 CAVIN1Q6NZI2 390 aaKnown RBP16.12■□□□□ 0.17
TSC22D1-203ENST00000458659 SKOR2Q2VWA4 1001 aaPredicted RBP16.12■□□□□ 0.17
TSC22D1-203ENST00000458659 RPRD2Q5VT52 1461 aaKnown RBP16.11■□□□□ 0.17
TSC22D1-203ENST00000458659 PLPPR3Q6T4P5 718 aa16.11■□□□□ 0.17
TSC22D1-203ENST00000458659 DHX29Q7Z478 1369 aaKnown RBP16.11■□□□□ 0.17
TSC22D1-203ENST00000458659 GAPVD1Q14C86 1478 aa16.11■□□□□ 0.17
TSC22D1-203ENST00000458659 PTMSP20962 102 aa16.11■□□□□ 0.17
TSC22D1-203ENST00000458659 CHAF1AQ13111 956 aaPredicted RBP16.1■□□□□ 0.17
TSC22D1-203ENST00000458659 EHBP1L1Q8N3D4 1523 aa16.1■□□□□ 0.17
TSC22D1-203ENST00000458659 C1orf115Q9H7X2 142 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 167.2 ms